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Homologs of tcpA gene of AF452573

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) tcpA in NC_012582


> AF452573|1|G1|18071787|AAL58333.1|Vibrio_cholerae_AQ1875|+|1..612|tcpA|-|TcpA
Length=203

 Score =  263 bits (984),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 162/203 (80%), Positives = 186/203 (92%), Gaps = 4/203 (1%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLGNYPAT  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQ+LNS+QVAL QTYRGLGNYP T
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQVALIQTYRGLGNYPET  60

Query  86   ADATAASKLTSGLVSLGKISSDEAKNPFIGTNMNIFSFPRNAAANKAFAISVDGLTQAQC  145
            +D TAA+KLT+GLVSLGKIS+DEAKNPF GT+MNIFSF RN+AANKAFAISVDGLTQAQC
Sbjct  61   TDDTAAAKLTAGLVSLGKISPDEAKNPFTGTDMNIFSFNRNGAANKAFAISVDGLTQAQC  120

Query  146  KTLITSVGDMFPYIAIKaggavaladlgdFENSAAAAETGVGVIKSIAPASKNLDLTNIT  205
            KTL+TSVGDMFPY+ +K ++ VA ADL+DFE +AA A+TGVGVIKSI+P++KNL+LT+IT
Sbjct  121  KTLVTSVGDMFPYVLVKNAAKVAKADLSDFETTAAVADTGVGVIKSISPTGKNLNLTDIT  180

Query  206  HVEKLCK----GTAPFGVAFGNS  224
            HVEKLC     G++ F+VAFGNS
Sbjct  181  HVEKLCSAAAGGATTFSVAFGNS  203

2) tcpA in NC_009457


> AF452573|1|G1|18071787|AAL58333.1|Vibrio_cholerae_AQ1875|+|1..612|tcpA|-|TcpA
Length=203

 Score =  263 bits (984),  Expect = 4e-72, Method: Compositional matrix adjust.
 Identities = 162/203 (80%), Positives = 186/203 (92%), Gaps = 4/203 (1%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLGNYPAT  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQ+LNS+QVAL QTYRGLGNYP T
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQVALIQTYRGLGNYPET  60

Query  86   ADATAASKLTSGLVSLGKISSDEAKNPFIGTNMNIFSFPRNAAANKAFAISVDGLTQAQC  145
            +D TAA+KLT+GLVSLGKIS+DEAKNPF GT+MNIFSF RN+AANKAFAISVDGLTQAQC
Sbjct  61   TDDTAAAKLTAGLVSLGKISPDEAKNPFTGTDMNIFSFNRNGAANKAFAISVDGLTQAQC  120

Query  146  KTLITSVGDMFPYIAIKaggavaladlgdFENSAAAAETGVGVIKSIAPASKNLDLTNIT  205
            KTL+TSVGDMFPY+ +K ++ VA ADL+DFE +AA A+TGVGVIKSI+P++KNL+LT+IT
Sbjct  121  KTLVTSVGDMFPYVLVKNAAKVAKADLSDFETTAAVADTGVGVIKSISPTGKNLNLTDIT  180

Query  206  HVEKLCK----GTAPFGVAFGNS  224
            HVEKLC     G++ F+VAFGNS
Sbjct  181  HVEKLCSAAAGGATTFSVAFGNS  203

3) O3Y_03850 in NC_016944


> AF452573|1|G1|18071787|AAL58333.1|Vibrio_cholerae_AQ1875|+|1..612|tcpA|-|TcpA
Length=203

 Score =  249 bits (928),  Expect = 9e-68, Method: Compositional matrix adjust.
 Identities = 154/203 (76%), Positives = 180/203 (89%), Gaps = 4/203 (1%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQ+A+ QTYR+LGNYP T
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQVALIQTYRGLGNYPET  60

Query  86   ananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            ++  AA++L+ GLVSLGK+S+DEAKNPFTGT M IFSF RN+AANKAFAI+V+GLTQAQC
Sbjct  61   TDDTAAAKLTAGLVSLGKISPDEAKNPFTGTDMNIFSFNRNGAANKAFAISVDGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNIT  205
            KTLVTSVGDMFP++ VK++A  A ADL+DFET+ A A TG GVIKSI+P + NLNLT+IT
Sbjct  121  KTLVTSVGDMFPYVLVKNAAKVAKADLSDFETTAAVADTGVGVIKSISPTGKNLNLTDIT  180

Query  206  HVEKLCT----GTAPFTVAFGNS  224
            HVEKLC+    G++ F+VAFGNS
Sbjct  181  HVEKLCSAAAGGATTFSVAFGNS  203

4) tcpA in NC_012578


> AF452573|1|G1|18071787|AAL58333.1|Vibrio_cholerae_AQ1875|+|1..612|tcpA|-|TcpA
Length=203

 Score =  249 bits (928),  Expect = 9e-68, Method: Compositional matrix adjust.
 Identities = 154/203 (76%), Positives = 180/203 (89%), Gaps = 4/203 (1%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQ+A+ QTYR+LGNYP T
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQVALIQTYRGLGNYPET  60

Query  86   ananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            ++  AA++L+ GLVSLGK+S+DEAKNPFTGT M IFSF RN+AANKAFAI+V+GLTQAQC
Sbjct  61   TDDTAAAKLTAGLVSLGKISPDEAKNPFTGTDMNIFSFNRNGAANKAFAISVDGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNIT  205
            KTLVTSVGDMFP++ VK++A  A ADL+DFET+ A A TG GVIKSI+P + NLNLT+IT
Sbjct  121  KTLVTSVGDMFPYVLVKNAAKVAKADLSDFETTAAVADTGVGVIKSISPTGKNLNLTDIT  180

Query  206  HVEKLCT----GTAPFTVAFGNS  224
            HVEKLC+    G++ F+VAFGNS
Sbjct  181  HVEKLCSAAAGGATTFSVAFGNS  203

5) VCD_003500 in NC_012668


> AF452573|1|G1|18071787|AAL58333.1|Vibrio_cholerae_AQ1875|+|1..612|tcpA|-|TcpA
Length=203

 Score =  249 bits (928),  Expect = 9e-68, Method: Compositional matrix adjust.
 Identities = 154/203 (76%), Positives = 180/203 (89%), Gaps = 4/203 (1%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQ+A+ QTYR+LGNYP T
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQVALIQTYRGLGNYPET  60

Query  86   ananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            ++  AA++L+ GLVSLGK+S+DEAKNPFTGT M IFSF RN+AANKAFAI+V+GLTQAQC
Sbjct  61   TDDTAAAKLTAGLVSLGKISPDEAKNPFTGTDMNIFSFNRNGAANKAFAISVDGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNIT  205
            KTLVTSVGDMFP++ VK++A  A ADL+DFET+ A A TG GVIKSI+P + NLNLT+IT
Sbjct  121  KTLVTSVGDMFPYVLVKNAAKVAKADLSDFETTAAVADTGVGVIKSISPTGKNLNLTDIT  180

Query  206  HVEKLCT----GTAPFTVAFGNS  224
            HVEKLC+    G++ F+VAFGNS
Sbjct  181  HVEKLCSAAAGGATTFSVAFGNS  203

6) VC0828 in NC_002505


> AF452573|1|G1|18071787|AAL58333.1|Vibrio_cholerae_AQ1875|+|1..612|tcpA|-|TcpA
Length=203

 Score =  249 bits (928),  Expect = 9e-68, Method: Compositional matrix adjust.
 Identities = 154/203 (76%), Positives = 180/203 (89%), Gaps = 4/203 (1%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQ+A+ QTYR+LGNYP T
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQVALIQTYRGLGNYPET  60

Query  86   ananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            ++  AA++L+ GLVSLGK+S+DEAKNPFTGT M IFSF RN+AANKAFAI+V+GLTQAQC
Sbjct  61   TDDTAAAKLTAGLVSLGKISPDEAKNPFTGTDMNIFSFNRNGAANKAFAISVDGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNIT  205
            KTLVTSVGDMFP++ VK++A  A ADL+DFET+ A A TG GVIKSI+P + NLNLT+IT
Sbjct  121  KTLVTSVGDMFPYVLVKNAAKVAKADLSDFETTAAVADTGVGVIKSISPTGKNLNLTDIT  180

Query  206  HVEKLCT----GTAPFTVAFGNS  224
            HVEKLC+    G++ F+VAFGNS
Sbjct  181  HVEKLCSAAAGGATTFSVAFGNS  203

7) tcpA in NC_016445


> AF452573|1|G1|18071787|AAL58333.1|Vibrio_cholerae_AQ1875|+|1..612|tcpA|-|TcpA
Length=203

 Score =  244 bits (910),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 154/203 (76%), Positives = 181/203 (90%), Gaps = 4/203 (1%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQ+A+ QTYR+LGNYP T
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQVALIQTYRGLGNYPET  60

Query  86   anasaatqlanGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            ++ +AA++L+ GLVSLGK+S+DEAKNPFTGT M IFSF RN+AANKAFAI+V+GLTQAQC
Sbjct  61   TDDTAAAKLTAGLVSLGKISPDEAKNPFTGTDMNIFSFNRNGAANKAFAISVDGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNIT  205
            KTLVTSVGDMFP++ VK++A  A ADL+DFET+ A A TG GVIKSI+P + NLNLT+IT
Sbjct  121  KTLVTSVGDMFPYVLVKNAAKVAKADLSDFETTAAVADTGVGVIKSISPTGKNLNLTDIT  180

Query  206  HVEKLCT----GTAPFTVAFGNS  224
            HVEKLC+    G++ F+VAFGNS
Sbjct  181  HVEKLCSAAAGGATTFSVAFGNS  203

8) tcpA in NC_006841


> AF452573|1|G1|18071787|AAL58333.1|Vibrio_cholerae_AQ1875|+|1..612|tcpA|-|TcpA
Length=203

 Score =  164 bits (607),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 147/199 (74%), Gaps = 5/199 (2%)

Query  9    MTLLEVIIVLGIMGVISAGVVILAQRAIDNQNVSKLSQALNTIQTAMVQTYRSKQSYPDV  68
            MTLLEVIIVLGIMGV+SAGVV LAQRAID+QN++K +Q LN++Q A++QTYR+  +YP+ 
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQVALIQTYRGLGNYPET  60

Query  69   LQDAVKAKKLTDALVSMGRVTESDLINPFTGAPMLIFTAKDNKAANRGFAIKVSDLSKDQ  128
             +D+  A KLT +LVS+G+++  +  NPFTG+ M IF+ + N AAN++FAI V +L++ Q
Sbjct  61   TDDTA-AAKLTAGLVSLGKISPDEAKNPFTGTDMNIFSFNRNGAANKAFAISVDGLTQAQ  119

Query  129  CTSLISNSADLFSFIEVQNRGTAMAADF--Y--VDPDATKSVGVIKSTKGGAKTLDLTNL  184
            C +L+++ +D+F+++ V+N +    AD+  +    + A  +VGVIKS    +K L+LT++
Sbjct  120  CKTLVTSVGDMFPYVLVKNAAKVAKADLSDFETTAAVADTGVGVIKSISPTGKNLNLTDI  179

Query  185  DHISALCGGPGAGDSYFDV  203
             H+  LC+++++G + F V
Sbjct  180  THVEKLCSAAAGGATTFSV  198