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Homologs of tcpA gene of AF452571

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) tcpA in NC_012582


> AF452571|1|G1|18071783|AAL58331.1|Vibrio_cholerae_63|+|1..600|tcpA|-|TcpA
Length=199

 Score =  257 bits (961),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 173/199 (87%), Positives = 186/199 (94%), Gaps = 0/199 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLGNYPAT  85
            MTLLEVIIVLGIMGVVSAGVVTL QRAIDSQNMTKAAQSLNS+QVALTQTYRGLG+YP T
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLXQRAIDSQNMTKAAQSLNSVQVALTQTYRGLGQYPVT  60

Query  86   ADATAASKLTSGLVSLGKISSDEAKNPFIGTNMNIFSFPRNAAANKAFAISVDGLTQAQC  145
            +DATAA+KLTSGLVSLGKIS DEAKNPF G NMNIFSFPRN+AANKAFAI+VDGLTQAQC
Sbjct  61   GDATAAAKLTSGLVSLGKISVDEAKNPFTGGNMNIFSFPRNGAANKAFAITVDGLTQAQC  120

Query  146  KTLITSVGDMFPYIAIKaggavaladlgdFENSAAAAETGVGVIKSIAPASKNLDLTNIT  205
            KTL+TSVGDMFPYIAIKAG+A+ALADLGDFE + A A  GVGVIKSI+P+S NL LT+IT
Sbjct  121  KTLVTSVGDMFPYIAIKAGAAIALADLGDFETTDAKAVDGVGVIKSISPSSVNLSLTEIT  180

Query  206  HVEKLCKGTAPFGVAFGNS  224
            HVEKLC GTAPFGVAFGNS
Sbjct  181  HVEKLCTGTAPFGVAFGNS  199

2) tcpA in NC_009457


> AF452571|1|G1|18071783|AAL58331.1|Vibrio_cholerae_63|+|1..600|tcpA|-|TcpA
Length=199

 Score =  257 bits (961),  Expect = 2e-70, Method: Compositional matrix adjust.
 Identities = 173/199 (87%), Positives = 186/199 (94%), Gaps = 0/199 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLGNYPAT  85
            MTLLEVIIVLGIMGVVSAGVVTL QRAIDSQNMTKAAQSLNS+QVALTQTYRGLG+YP T
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLXQRAIDSQNMTKAAQSLNSVQVALTQTYRGLGQYPVT  60

Query  86   ADATAASKLTSGLVSLGKISSDEAKNPFIGTNMNIFSFPRNAAANKAFAISVDGLTQAQC  145
            +DATAA+KLTSGLVSLGKIS DEAKNPF G NMNIFSFPRN+AANKAFAI+VDGLTQAQC
Sbjct  61   GDATAAAKLTSGLVSLGKISVDEAKNPFTGGNMNIFSFPRNGAANKAFAITVDGLTQAQC  120

Query  146  KTLITSVGDMFPYIAIKaggavaladlgdFENSAAAAETGVGVIKSIAPASKNLDLTNIT  205
            KTL+TSVGDMFPYIAIKAG+A+ALADLGDFE + A A  GVGVIKSI+P+S NL LT+IT
Sbjct  121  KTLVTSVGDMFPYIAIKAGAAIALADLGDFETTDAKAVDGVGVIKSISPSSVNLSLTEIT  180

Query  206  HVEKLCKGTAPFGVAFGNS  224
            HVEKLC GTAPFGVAFGNS
Sbjct  181  HVEKLCTGTAPFGVAFGNS  199

3) O3Y_03850 in NC_016944


> AF452571|1|G1|18071783|AAL58331.1|Vibrio_cholerae_63|+|1..600|tcpA|-|TcpA
Length=199

 Score =  249 bits (929),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 159/199 (80%), Positives = 181/199 (91%), Gaps = 0/199 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTL QRAIDSQNMTKAAQ+LNSVQ+A+TQTYR+LG+YP T
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLXQRAIDSQNMTKAAQSLNSVQVALTQTYRGLGQYPVT  60

Query  86   ananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            ++A AA++L++GLVSLGK+S DEAKNPFTG  M IFSFPRN+AANKAFAITV+GLTQAQC
Sbjct  61   GDATAAAKLTSGLVSLGKISVDEAKNPFTGGNMNIFSFPRNGAANKAFAITVDGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNIT  205
            KTLVTSVGDMFP+I +K GA  A+ADLGDFET+ A A  G GVIKSI+P+S NL+LT+IT
Sbjct  121  KTLVTSVGDMFPYIAIKAGAAIALADLGDFETTDAKAVDGVGVIKSISPSSVNLSLTEIT  180

Query  206  HVEKLCTGTAPFTVAFGNS  224
            HVEKLCTGTAPF VAFGNS
Sbjct  181  HVEKLCTGTAPFGVAFGNS  199

4) tcpA in NC_012578


> AF452571|1|G1|18071783|AAL58331.1|Vibrio_cholerae_63|+|1..600|tcpA|-|TcpA
Length=199

 Score =  249 bits (929),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 159/199 (80%), Positives = 181/199 (91%), Gaps = 0/199 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTL QRAIDSQNMTKAAQ+LNSVQ+A+TQTYR+LG+YP T
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLXQRAIDSQNMTKAAQSLNSVQVALTQTYRGLGQYPVT  60

Query  86   ananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            ++A AA++L++GLVSLGK+S DEAKNPFTG  M IFSFPRN+AANKAFAITV+GLTQAQC
Sbjct  61   GDATAAAKLTSGLVSLGKISVDEAKNPFTGGNMNIFSFPRNGAANKAFAITVDGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNIT  205
            KTLVTSVGDMFP+I +K GA  A+ADLGDFET+ A A  G GVIKSI+P+S NL+LT+IT
Sbjct  121  KTLVTSVGDMFPYIAIKAGAAIALADLGDFETTDAKAVDGVGVIKSISPSSVNLSLTEIT  180

Query  206  HVEKLCTGTAPFTVAFGNS  224
            HVEKLCTGTAPF VAFGNS
Sbjct  181  HVEKLCTGTAPFGVAFGNS  199

5) VCD_003500 in NC_012668


> AF452571|1|G1|18071783|AAL58331.1|Vibrio_cholerae_63|+|1..600|tcpA|-|TcpA
Length=199

 Score =  249 bits (929),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 159/199 (80%), Positives = 181/199 (91%), Gaps = 0/199 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTL QRAIDSQNMTKAAQ+LNSVQ+A+TQTYR+LG+YP T
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLXQRAIDSQNMTKAAQSLNSVQVALTQTYRGLGQYPVT  60

Query  86   ananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            ++A AA++L++GLVSLGK+S DEAKNPFTG  M IFSFPRN+AANKAFAITV+GLTQAQC
Sbjct  61   GDATAAAKLTSGLVSLGKISVDEAKNPFTGGNMNIFSFPRNGAANKAFAITVDGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNIT  205
            KTLVTSVGDMFP+I +K GA  A+ADLGDFET+ A A  G GVIKSI+P+S NL+LT+IT
Sbjct  121  KTLVTSVGDMFPYIAIKAGAAIALADLGDFETTDAKAVDGVGVIKSISPSSVNLSLTEIT  180

Query  206  HVEKLCTGTAPFTVAFGNS  224
            HVEKLCTGTAPF VAFGNS
Sbjct  181  HVEKLCTGTAPFGVAFGNS  199

6) VC0828 in NC_002505


> AF452571|1|G1|18071783|AAL58331.1|Vibrio_cholerae_63|+|1..600|tcpA|-|TcpA
Length=199

 Score =  249 bits (929),  Expect = 8e-68, Method: Compositional matrix adjust.
 Identities = 159/199 (80%), Positives = 181/199 (91%), Gaps = 0/199 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTL QRAIDSQNMTKAAQ+LNSVQ+A+TQTYR+LG+YP T
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLXQRAIDSQNMTKAAQSLNSVQVALTQTYRGLGQYPVT  60

Query  86   ananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            ++A AA++L++GLVSLGK+S DEAKNPFTG  M IFSFPRN+AANKAFAITV+GLTQAQC
Sbjct  61   GDATAAAKLTSGLVSLGKISVDEAKNPFTGGNMNIFSFPRNGAANKAFAITVDGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNIT  205
            KTLVTSVGDMFP+I +K GA  A+ADLGDFET+ A A  G GVIKSI+P+S NL+LT+IT
Sbjct  121  KTLVTSVGDMFPYIAIKAGAAIALADLGDFETTDAKAVDGVGVIKSISPSSVNLSLTEIT  180

Query  206  HVEKLCTGTAPFTVAFGNS  224
            HVEKLCTGTAPF VAFGNS
Sbjct  181  HVEKLCTGTAPFGVAFGNS  199

7) tcpA in NC_016445


> AF452571|1|G1|18071783|AAL58331.1|Vibrio_cholerae_63|+|1..600|tcpA|-|TcpA
Length=199

 Score =  244 bits (910),  Expect = 2e-66, Method: Compositional matrix adjust.
 Identities = 159/199 (80%), Positives = 182/199 (92%), Gaps = 0/199 (0%)

Query  26   MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLGNYPat  85
            MTLLEVIIVLGIMGVVSAGVVTL QRAIDSQNMTKAAQ+LNSVQ+A+TQTYR+LG+YP T
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLXQRAIDSQNMTKAAQSLNSVQVALTQTYRGLGQYPVT  60

Query  86   anasaatqlanGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGLTQAQC  145
            ++A+AA++L++GLVSLGK+S DEAKNPFTG  M IFSFPRN+AANKAFAITV+GLTQAQC
Sbjct  61   GDATAAAKLTSGLVSLGKISVDEAKNPFTGGNMNIFSFPRNGAANKAFAITVDGLTQAQC  120

Query  146  KTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLNLTNIT  205
            KTLVTSVGDMFP+I +K GA  A+ADLGDFET+ A A  G GVIKSI+P+S NL+LT+IT
Sbjct  121  KTLVTSVGDMFPYIAIKAGAAIALADLGDFETTDAKAVDGVGVIKSISPSSVNLSLTEIT  180

Query  206  HVEKLCTGTAPFTVAFGNS  224
            HVEKLCTGTAPF VAFGNS
Sbjct  181  HVEKLCTGTAPFGVAFGNS  199

8) tcpA in NC_006841


> AF452571|1|G1|18071783|AAL58331.1|Vibrio_cholerae_63|+|1..600|tcpA|-|TcpA
Length=199

 Score =  148 bits (546),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 91/192 (48%), Positives = 137/192 (72%), Gaps = 5/192 (2%)

Query  9    MTLLEVIIVLGIMGVISAGVVILAQRAIDNQNVSKLSQALNTIQTAMVQTYRSKQSYPDV  68
            MTLLEVIIVLGIMGV+SAGVV L QRAID+QN++K +Q+LN++Q A+ QTYR+   YP V
Sbjct  1    MTLLEVIIVLGIMGVVSAGVVTLXQRAIDSQNMTKAAQSLNSVQVALTQTYRGLGQYP-V  59

Query  69   LQDAVKAKKLTDALVSMGRVTESDLINPFTGAPMLIFTAKDNKAANRGFAIKVSDLSKDQ  128
              DA  A KLT +LVS+G+++  +  NPFTG+ M IF+   N AAN++FAI V +L++ Q
Sbjct  60   TGDATAAAKLTSGLVSLGKISVDEAKNPFTGGNMNIFSFPRNGAANKAFAITVDGLTQAQ  119

Query  129  CTSLISNSADLFSFIEVQNRGTAMAADF--Y--VDPDATKSVGVIKSTKGGAKTLDLTNL  184
            C +L+++ +D+F++I ++  ++   AD+  +   D+ A  +VGVIKS   ++  L LT++
Sbjct  120  CKTLVTSVGDMFPYIAIKAGAAIALADLGDFETTDAKAVDGVGVIKSISPSSVNLSLTEI  179

Query  185  DHISALCGGPGA  196
             H+  LC G ++
Sbjct  180  THVEKLCTGTAP  191