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Homologs of unnamed gene of AF447814

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SbBS512_E2398
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-154

91.1

2) SbBS512_E2142
( - )

NC_010658
(Shigella boydii CDC 3083-94)

e-151

91.2

3) ROD_31801
( - )

NC_013716
(Citrobacter rodentium ICC168)

9e-58

86.8

• Sequence Alignments

1) SbBS512_E2398 in NC_010658


>AF447814|1|G1|18265860|AAL67333.1|Escherichia_coli_CFT073|+|1..339|-|-|L0014-like 
          Length = 339

 Score = 541 bits (1396), Expect = e-154
 Identities = 296/325 (91%)
 Strand = Plus / Minus

Query: 108 tcagtgcgttaaggcgggatgtttttggctgacgccagtccagcttatcgaggagcattg 167
           |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tcagtgagttaaggcggaatgtttttggctgacgccagtccagcttatcgaggagcattg 280

Query: 168 ccagttgcgagcgggtaatggataccttgccgtcacgcacagcaggccagataaactggc 227
           |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 279 ccagttgcgagcgggtaatggataccttaccgtcacgcaccgcaggccagataaactggc 220

Query: 228 cttcctccaggcgtctggtgaacaggcacagaccatcagcatcagcccacaggattttaa 287
           |||||||||||||| |||||||||||||||||||||||||||| ||||| || |||||||
Sbjct: 219 cttcctccaggcgtttggtgaacaggcacagaccatcagcatcggcccagagtattttaa 160

Query: 288 tcatgtcaccccgtcggccacggaagatgaacaggtgaccggagaagggattatcattca 347
              ||||||||||||||||||| ||||| ||||||||||| ||||||||  | |||| ||
Sbjct: 159 cagtgtcaccccgtcggccacgaaagataaacaggtgacctgagaagggggtctcatcca 100

Query: 348 gcacatgctgtacctgttcacccagcccgttgaaagacttacgcatatcggttatcccag 407
           ||||||| ||||||||||| ||||| |||||||| || |||||||||||||| |  || |
Sbjct: 99  gcacatgttgtacctgttctcccagaccgttgaaggatttacgcatatcggtaacgccgg 40

Query: 408 caacgagccagatgcgggtgcctga 432
           | ||||||||||||||||| |||||
Sbjct: 39  ccacgagccagatgcgggtacctga 15

2) SbBS512_E2142 in NC_010658


>AF447814|1|G1|18265860|AAL67333.1|Escherichia_coli_CFT073|+|1..339|-|-|L0014-like 
          Length = 339

 Score = 531 bits (1371), Expect = e-151
 Identities = 290/318 (91%)
 Strand = Plus / Minus

Query: 58  gttaaggcgggatgtttttggctgacgccagtccagcttatcgaggagcattgccagttg 117
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gttaaggcggaatgtttttggctgacgccagtccagcttatcgaggagcattgccagttg 273

Query: 118 cgagcgggtaatggataccttgccgtcacgcacagcaggccagataaactggccttcctc 177
           ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 272 cgagcgggtaatggataccttaccgtcacgcaccgcaggccagataaactggccttcctc 213

Query: 178 caggcgtctggtgaacaggcacagaccatcagcatcagcccacaggattttaatcatgtc 237
           ||||||| |||||||||||||||||||||||||||| ||||| || |||||||   ||||
Sbjct: 212 caggcgtttggtgaacaggcacagaccatcagcatcggcccagagtattttaacagtgtc 153

Query: 238 accccgtcggccacggaagatgaacaggtgaccggagaagggattatcattcagcacatg 297
           ||||||||||||||| ||||| ||||||||||| ||||||||  | |||| |||||||||
Sbjct: 152 accccgtcggccacgaaagataaacaggtgacctgagaagggggtctcatccagcacatg 93

Query: 298 ctgtacctgttcacccagcccgttgaaagacttacgcatatcggttatcccagcaacgag 357
            ||||||||||| ||||| |||||||| || |||||||||||||| |  || || |||||
Sbjct: 92  ttgtacctgttctcccagaccgttgaaggatttacgcatatcggtaacgccggccacgag 33

Query: 358 ccagatgcgggtgcctga 375
           |||||||||||| |||||
Sbjct: 32  ccagatgcgggtacctga 15

3) ROD_31801 in NC_013716


>AF447814|1|G1|18265860|AAL67333.1|Escherichia_coli_CFT073|+|1..339|-|-|L0014-like 
          Length = 339

 Score = 221 bits (570), Expect = 9e-58
 Identities = 123/139 (88%)
 Strand = Plus / Plus

Query: 194 accaaacgccttgaagaagggtcgtttatctggcctgcggtgcgtgatggtaagatctcc 253
           ||||||||||| || |||||   |||||||||||||||||||||||| |||||| | |||
Sbjct: 201 accaaacgcctggaggaaggccagtttatctggcctgcggtgcgtgacggtaaggtatcc 260

Query: 254 atgacccgctcacaactggcaatgctcttcaataaactggactggcgtcagccgaaaaca 313
           || |||||||| ||||||||||||||| || |||| ||||||||||||||||| ||||||
Sbjct: 261 attacccgctcgcaactggcaatgctcctcgataagctggactggcgtcagccaaaaaca 320

Query: 314 tcccgccttaacgcactga 332
           | |||||||||| ||||||
Sbjct: 321 ttccgccttaactcactga 339


 Score = 218 bits (563), Expect = 6e-57
 Identities = 128/150 (85%)
 Strand = Plus / Plus

Query: 3   gatctccctcccatcaggtacccgtatctggctggttgcaggtgtgacagatatgcgtaa 62
           |||||| ||||||||||||||||| |||||||| || || || || || |||||||||||
Sbjct: 2   gatctcactcccatcaggtacccgcatctggctcgtggccggcgttaccgatatgcgtaa 61

Query: 63  atccttcaacggactgagggaacaaatacaacatatgctgaatgataacaccttctccga 122
           |||||||||||| ||| | |||||  |||||||| ||||| |||| | | ||||||| | 
Sbjct: 62  atccttcaacggtctgggagaacaggtacaacatgtgctggatgagacccccttctcagg 121

Query: 123 tcacctgtttatcttccgtagccgacgggg 152
           ||||||||||||||| ||| ||||||||||
Sbjct: 122 tcacctgtttatctttcgtggccgacgggg 151


 Score = 52 bits (135), Expect = 6e-07
 Identities = 31/36 (86%)
 Strand = Plus / Plus

Query: 158 actgttaaaaacctctgggtagatgctgatggcctg 193
           ||||||||||  |||||||  ||||||||||| |||
Sbjct: 156 actgttaaaatactctgggccgatgctgatggtctg 191