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Homologs of tcpF gene of AF306798

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) tcpF in NC_012582


> AF306798|1|G1|11139685|AAG31796.1|Vibrio_cholerae_SCE200|+|137..1144|tcpF|-|toxin 
co-regulated pilus biosynthesis protein 
F
Length=335

 Score =  429 bits (1614),  Expect = 1e-121, Method: Compositional matrix adjust.
 Identities = 240/338 (72%), Positives = 305/338 (91%), Gaps = 3/338 (0%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            MRYKKTLM+SIMITSFN+FAFNDNYSSTSTVYATS+EATDSRGSEHLRYPYLECIK+GMS
Sbjct  1    MRYKKTLMISIMITSFNTFAFNDNYSSTSTVYATSSEATDSRGSEHLRYPYLECIKLGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RDYLENCV VSFPT  ++FY+AYP+   + +K RTKEDF ARLL+GDY++L+KLY+D+YL
Sbjct  61   RDYLENCVTVSFPTLSELFYGAYPA--DEEGKKRTKEDFQARLLSGDYEGLEKLYVDYYL  118

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTT+DW+IPTRDQIE+LVN A++GKL+++LN EY+ GRFLTK+++ Y IVNVG+V+D+ 
Sbjct  119  AQTTYDWHIPTRDQIESLVNLAKDGKLTSTLNSEYLKGRFLTKNDSDYKIVNVGSVADSE  178

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVNELSK  240
            PVKLPA+VSKRGLMGT++VVNAIPNEI+P+IK+Y GT + L+PG A +A +EYD +EL K
Sbjct  179  PVKLPAVVSKRGLMGTSAVVNAIPNEIFPNIKIYKGTSALLQPGIAFMAPMEYDTSELQK  238

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSNNLTGKKLYNVSTNDMHNGY  300
            HGY+N+WDV   VLVG+P  + GVIYDP+Y E++K Y+PS+N  GKK+++VSTND+HNGY
Sbjct  239  HGYSNVWDVSATVLVGIPSVN-GVIYDPIYKESLKVYHPSDNYPGKKIFSVSTNDVHNGY  297

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            +WS++MFSNS+Y+TQ++LTK+DGSGVKLYSKA+SENF+
Sbjct  298  QWSKAMFSNSKYRTQVVLTKADGSGVKLYSKAFSENFN  335

2) tcpF in NC_009457


> AF306798|1|G1|11139685|AAG31796.1|Vibrio_cholerae_SCE200|+|137..1144|tcpF|-|toxin 
co-regulated pilus biosynthesis protein 
F
Length=335

 Score =  429 bits (1614),  Expect = 1e-121, Method: Compositional matrix adjust.
 Identities = 240/338 (72%), Positives = 305/338 (91%), Gaps = 3/338 (0%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            MRYKKTLM+SIMITSFN+FAFNDNYSSTSTVYATS+EATDSRGSEHLRYPYLECIK+GMS
Sbjct  1    MRYKKTLMISIMITSFNTFAFNDNYSSTSTVYATSSEATDSRGSEHLRYPYLECIKLGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RDYLENCV VSFPT  ++FY+AYP+   + +K RTKEDF ARLL+GDY++L+KLY+D+YL
Sbjct  61   RDYLENCVTVSFPTLSELFYGAYPA--DEEGKKRTKEDFQARLLSGDYEGLEKLYVDYYL  118

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTT+DW+IPTRDQIE+LVN A++GKL+++LN EY+ GRFLTK+++ Y IVNVG+V+D+ 
Sbjct  119  AQTTYDWHIPTRDQIESLVNLAKDGKLTSTLNSEYLKGRFLTKNDSDYKIVNVGSVADSE  178

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVNELSK  240
            PVKLPA+VSKRGLMGT++VVNAIPNEI+P+IK+Y GT + L+PG A +A +EYD +EL K
Sbjct  179  PVKLPAVVSKRGLMGTSAVVNAIPNEIFPNIKIYKGTSALLQPGIAFMAPMEYDTSELQK  238

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSNNLTGKKLYNVSTNDMHNGY  300
            HGY+N+WDV   VLVG+P  + GVIYDP+Y E++K Y+PS+N  GKK+++VSTND+HNGY
Sbjct  239  HGYSNVWDVSATVLVGIPSVN-GVIYDPIYKESLKVYHPSDNYPGKKIFSVSTNDVHNGY  297

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            +WS++MFSNS+Y+TQ++LTK+DGSGVKLYSKA+SENF+
Sbjct  298  QWSKAMFSNSKYRTQVVLTKADGSGVKLYSKAFSENFN  335

3) tcpF in NC_012578


> AF306798|1|G1|11139685|AAG31796.1|Vibrio_cholerae_SCE200|+|137..1144|tcpF|-|toxin 
co-regulated pilus biosynthesis protein 
F
Length=335

 Score =  429 bits (1616),  Expect = 7e-122, Method: Compositional matrix adjust.
 Identities = 242/338 (72%), Positives = 305/338 (91%), Gaps = 3/338 (0%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            MRYKKTLM+SIMITSFN+FAFNDNYSSTSTVYATS+EATDSRGSEHLRYPYLECIK+GMS
Sbjct  1    MRYKKTLMISIMITSFNTFAFNDNYSSTSTVYATSSEATDSRGSEHLRYPYLECIKLGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RDYLENCV VSFPT  ++FY+AYP+   + +K RTKEDF ARLL+GDY++L+KLY+D+YL
Sbjct  61   RDYLENCVTVSFPTLSELFYGAYPA--DEEGKKRTKEDFQARLLSGDYEGLEKLYVDYYL  118

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTT+DW+IPTRDQIE+LVN A++GKL+++LN EY+ GRFLTK+++ Y IVNVG+V+D+ 
Sbjct  119  AQTTYDWHIPTRDQIESLVNLAKDGKLTSTLNSEYLKGRFLTKNDSDYKIVNVGSVADSE  178

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240
            PVKLPA+VSKRGLMGT++VVNAIPNEI+P+IK+Y GT + L+PG A +A +EYD SEL K
Sbjct  179  PVKLPAVVSKRGLMGTSAVVNAIPNEIFPNIKIYKGTSALLQPGIAFMAPMEYDTSELQK  238

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSDNLTGKKLYNVSTNDMHNGY  300
            HGY+N+WDV   VLVG+P  + GVIYDP+Y E++K Y+PSDN  GKK+++VSTND+HNGY
Sbjct  239  HGYSNVWDVSATVLVGIPSVN-GVIYDPIYKESLKVYHPSDNYPGKKIFSVSTNDVHNGY  297

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            +WS++MFSNS+Y+TQ++LTK+DGSGVKLYSKA+SENF+
Sbjct  298  QWSKAMFSNSKYRTQVVLTKADGSGVKLYSKAFSENFN  335

4) O3Y_03895 in NC_016944


> AF306798|1|G1|11139685|AAG31796.1|Vibrio_cholerae_SCE200|+|137..1144|tcpF|-|toxin 
co-regulated pilus biosynthesis protein 
F
Length=335

 Score =  429 bits (1616),  Expect = 8e-122, Method: Compositional matrix adjust.
 Identities = 242/338 (72%), Positives = 305/338 (91%), Gaps = 3/338 (0%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            MRYKKTLM+SIMITSFN+FAFNDNYSSTSTVYATS+EATDSRGSEHLRYPYLECIK+GMS
Sbjct  1    MRYKKTLMISIMITSFNTFAFNDNYSSTSTVYATSSEATDSRGSEHLRYPYLECIKLGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RDYLENCV VSFPT  ++FY+AYP+   + +K RTKEDF ARLL+GDY++L+KLY+D+YL
Sbjct  61   RDYLENCVTVSFPTLSELFYGAYPA--DEEGKKRTKEDFQARLLSGDYEGLEKLYVDYYL  118

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTT+DW+IPTRDQIE+LVN A++GKL+++LN EY+ GRFLTK+++ Y IVNVG+V+D+ 
Sbjct  119  AQTTYDWHIPTRDQIESLVNLAKDGKLTSTLNSEYLKGRFLTKNDSDYKIVNVGSVADSE  178

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240
            PVKLPA+VSKRGLMGT++VVNAIPNEI+P+IK+Y GT + L+PG A +A +EYD SEL K
Sbjct  179  PVKLPAVVSKRGLMGTSAVVNAIPNEIFPNIKIYKGTSALLQPGIAFMAPMEYDTSELQK  238

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDVHNGY  300
            HGY+N+WDV   VLVG+P  + GVIYDP+Y E++K Y+PS+N  GKK+++VSTNDVHNGY
Sbjct  239  HGYSNVWDVSATVLVGIPSVN-GVIYDPIYKESLKVYHPSDNYPGKKIFSVSTNDVHNGY  297

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            +WS++MFSNS+Y+TQ++LTK+DGSGVKLYSKA+SENF+
Sbjct  298  QWSKAMFSNSKYRTQVVLTKADGSGVKLYSKAFSENFN  335

5) VCD_003491 in NC_012668


> AF306798|1|G1|11139685|AAG31796.1|Vibrio_cholerae_SCE200|+|137..1144|tcpF|-|toxin 
co-regulated pilus biosynthesis protein 
F
Length=335

 Score =  428 bits (1612),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 241/338 (72%), Positives = 305/338 (91%), Gaps = 3/338 (0%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            MRYKKTLM+SIMITSFN+FAFNDNYSSTSTVYATS+EATDSRGSEHLRYPYLECIK+GMS
Sbjct  1    MRYKKTLMISIMITSFNTFAFNDNYSSTSTVYATSSEATDSRGSEHLRYPYLECIKLGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RDYLENCV VSFPT  ++FY+AYP+   + +K RTKEDF ARLL+GDY++L+KLY+D+YL
Sbjct  61   RDYLENCVTVSFPTLSELFYGAYPA--DEEGKKRTKEDFQARLLSGDYEGLEKLYVDYYL  118

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTT+DW+IPTRDQIE+LVN A++GKL+++LN EY+ GRFLTK+++ Y IVNVG+V+D+ 
Sbjct  119  AQTTYDWHIPTRDQIESLVNLAKDGKLTSTLNSEYLKGRFLTKNDSDYKIVNVGSVADSE  178

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240
            PVKLPA+VSKRGLMGT++VVNAIPNEI+P+IK+Y GT + L+PG A +A +EYD SEL K
Sbjct  179  PVKLPAVVSKRGLMGTSAVVNAIPNEIFPNIKIYKGTSALLQPGIAFMAPMEYDTSELQK  238

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY  300
            HGY+N+WDV   VLVG+P  + GVIYDP+Y E++K Y+PS+N  GKK+++VSTND+HNGY
Sbjct  239  HGYSNVWDVSATVLVGIPSVN-GVIYDPIYKESLKVYHPSDNYPGKKIFSVSTNDVHNGY  297

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            +WS++MFSNS+Y+TQ++LTK+DGSGVKLYSKA+SENF+
Sbjct  298  QWSKAMFSNSKYRTQVVLTKADGSGVKLYSKAFSENFN  335

6) Vch1786_I0343 in NC_016445


> AF306798|1|G1|11139685|AAG31796.1|Vibrio_cholerae_SCE200|+|137..1144|tcpF|-|toxin 
co-regulated pilus biosynthesis protein 
F
Length=335

 Score =  428 bits (1612),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 241/338 (72%), Positives = 305/338 (91%), Gaps = 3/338 (0%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            MRYKKTLM+SIMITSFN+FAFNDNYSSTSTVYATS+EATDSRGSEHLRYPYLECIK+GMS
Sbjct  1    MRYKKTLMISIMITSFNTFAFNDNYSSTSTVYATSSEATDSRGSEHLRYPYLECIKLGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RDYLENCV VSFPT  ++FY+AYP+   + +K RTKEDF ARLL+GDY++L+KLY+D+YL
Sbjct  61   RDYLENCVTVSFPTLSELFYGAYPA--DEEGKKRTKEDFQARLLSGDYEGLEKLYVDYYL  118

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTT+DW+IPTRDQIE+LVN A++GKL+++LN EY+ GRFLTK+++ Y IVNVG+V+D+ 
Sbjct  119  AQTTYDWHIPTRDQIESLVNLAKDGKLTSTLNSEYLKGRFLTKNDSDYKIVNVGSVADSE  178

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240
            PVKLPA+VSKRGLMGT++VVNAIPNEI+P+IK+Y GT + L+PG A +A +EYD SEL K
Sbjct  179  PVKLPAVVSKRGLMGTSAVVNAIPNEIFPNIKIYKGTSALLQPGIAFMAPMEYDTSELQK  238

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY  300
            HGY+N+WDV   VLVG+P  + GVIYDP+Y E++K Y+PS+N  GKK+++VSTND+HNGY
Sbjct  239  HGYSNVWDVSATVLVGIPSVN-GVIYDPIYKESLKVYHPSDNYPGKKIFSVSTNDVHNGY  297

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            +WS++MFSNS+Y+TQ++LTK+DGSGVKLYSKA+SENF+
Sbjct  298  QWSKAMFSNSKYRTQVVLTKADGSGVKLYSKAFSENFN  335

7) VC0837 in NC_002505


> AF306798|1|G1|11139685|AAG31796.1|Vibrio_cholerae_SCE200|+|137..1144|tcpF|-|toxin 
co-regulated pilus biosynthesis protein 
F
Length=335

 Score =  428 bits (1612),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 241/338 (72%), Positives = 305/338 (91%), Gaps = 3/338 (0%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            MRYKKTLM+SIMITSFN+FAFNDNYSSTSTVYATS+EATDSRGSEHLRYPYLECIK+GMS
Sbjct  1    MRYKKTLMISIMITSFNTFAFNDNYSSTSTVYATSSEATDSRGSEHLRYPYLECIKLGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RDYLENCV VSFPT  ++FY+AYP+   + +K RTKEDF ARLL+GDY++L+KLY+D+YL
Sbjct  61   RDYLENCVTVSFPTLSELFYGAYPA--DEEGKKRTKEDFQARLLSGDYEGLEKLYVDYYL  118

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTT+DW+IPTRDQIE+LVN A++GKL+++LN EY+ GRFLTK+++ Y IVNVG+V+D+ 
Sbjct  119  AQTTYDWHIPTRDQIESLVNLAKDGKLTSTLNSEYLKGRFLTKNDSDYKIVNVGSVADSE  178

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240
            PVKLPA+VSKRGLMGT++VVNAIPNEI+P+IK+Y GT + L+PG A +A +EYD SEL K
Sbjct  179  PVKLPAVVSKRGLMGTSAVVNAIPNEIFPNIKIYKGTSALLQPGIAFMAPMEYDTSELQK  238

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY  300
            HGY+N+WDV   VLVG+P  + GVIYDP+Y E++K Y+PS+N  GKK+++VSTND+HNGY
Sbjct  239  HGYSNVWDVSATVLVGIPSVN-GVIYDPIYKESLKVYHPSDNYPGKKIFSVSTNDVHNGY  297

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            +WS++MFSNS+Y+TQ++LTK+DGSGVKLYSKA+SENF+
Sbjct  298  QWSKAMFSNSKYRTQVVLTKADGSGVKLYSKAFSENFN  335