> AF306795|1|G1|11139675|AAG31789.1|Vibrio_cholerae_SCE4|+|142..1143|tcpF|-|toxin
co-regulated pilus biosynthesis protein F
Length=333
Score = 394 bits (1483), Expect = 2e-111, Method: Compositional matrix adjust.
Identities = 226/338 (67%), Positives = 289/338 (86%), Gaps = 5/338 (1%)
Query 1 MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS 60
M+YKKTLM+SIMITSFNS AFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIK+GMS
Sbjct 1 MKYKKTLMFSIMITSFNSSAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKLGMS 60
Query 61 RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL 120
RD+L+NCV VSFPTS ++FY+AYP+ + +K RTKEDF ARLL+GDY +L+K Y+D+YL
Sbjct 61 RDFLDNCVTVSFPTSSELFYGAYPA--DEEGKKRTKEDFQARLLSGDYAGLEKYYVDYYL 118
Query 121 AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT 180
AQTT+DW+IPTRDQIE+LV A ++KLS++LN EY+ GRFLTK++G Y+IV VG V+D+
Sbjct 119 AQTTYDWHIPTRDQIESLVMLARDSKLSSTLNSEYLKGRFLTKNDGSYNIVTVGNVADSE 178
Query 181 PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK 240
PVKLPA+VSKRGLMGT+ +VNA+P EI+P+IK+Y + S+L PG + A +EYDVSEL K
Sbjct 179 PVKLPAVVSKRGLMGTSDIVNALPTEIFPNIKIYSA--SQLTPGNTFRAQMEYDVSELEK 236
Query 241 HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSDNLTGKKLYNVSTNDMHNGY 300
HGY++L D+ V+VGVP ++ GVIY PVY+E + ++N+ GK++Y STND+ NG+
Sbjct 237 HGYSDLSDISATVIVGVPSGN-GVIYAPVYQEKSFIVHHTNNFPGKQIYTFSTNDLGNGF 295
Query 301 KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK 338
+WSNTMFSN++Y+TQ++LTK DGSGV+LYSKAYSE+FK
Sbjct 296 QWSNTMFSNPKYRTQVVLTKTDGSGVRLYSKAYSEKFK 333 |