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Homologs of tcpF gene of AF306795

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) tcpF in NC_012578


> AF306795|1|G1|11139675|AAG31789.1|Vibrio_cholerae_SCE4|+|142..1143|tcpF|-|toxin 
co-regulated pilus biosynthesis protein F
Length=333

 Score =  394 bits (1483),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 226/338 (67%), Positives = 289/338 (86%), Gaps = 5/338 (1%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            M+YKKTLM+SIMITSFNS AFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIK+GMS
Sbjct  1    MKYKKTLMFSIMITSFNSSAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKLGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RD+L+NCV VSFPTS ++FY+AYP+   + +K RTKEDF ARLL+GDY +L+K Y+D+YL
Sbjct  61   RDFLDNCVTVSFPTSSELFYGAYPA--DEEGKKRTKEDFQARLLSGDYAGLEKYYVDYYL  118

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTT+DW+IPTRDQIE+LV  A ++KLS++LN EY+ GRFLTK++G Y+IV VG V+D+ 
Sbjct  119  AQTTYDWHIPTRDQIESLVMLARDSKLSSTLNSEYLKGRFLTKNDGSYNIVTVGNVADSE  178

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240
            PVKLPA+VSKRGLMGT+ +VNA+P EI+P+IK+Y +  S+L PG +  A +EYDVSEL K
Sbjct  179  PVKLPAVVSKRGLMGTSDIVNALPTEIFPNIKIYSA--SQLTPGNTFRAQMEYDVSELEK  236

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSDNLTGKKLYNVSTNDMHNGY  300
            HGY++L D+   V+VGVP ++ GVIY PVY+E     + ++N+ GK++Y  STND+ NG+
Sbjct  237  HGYSDLSDISATVIVGVPSGN-GVIYAPVYQEKSFIVHHTNNFPGKQIYTFSTNDLGNGF  295

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            +WSNTMFSN++Y+TQ++LTK DGSGV+LYSKAYSE+FK
Sbjct  296  QWSNTMFSNPKYRTQVVLTKTDGSGVRLYSKAYSEKFK  333

2) tcpF in NC_012582


> AF306795|1|G1|11139675|AAG31789.1|Vibrio_cholerae_SCE4|+|142..1143|tcpF|-|toxin 
co-regulated pilus biosynthesis protein F
Length=333

 Score =  394 bits (1482),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 226/338 (67%), Positives = 289/338 (86%), Gaps = 5/338 (1%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            M+YKKTLM+SIMITSFNS AFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIK+GMS
Sbjct  1    MKYKKTLMFSIMITSFNSSAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKLGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RD+L+NCV VSFPTS ++FY+AYP+   + +K RTKEDF ARLL+GDY +L+K Y+D+YL
Sbjct  61   RDFLDNCVTVSFPTSSELFYGAYPA--DEEGKKRTKEDFQARLLSGDYAGLEKYYVDYYL  118

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTT+DW+IPTRDQIE+LV  A ++KLS++LN EY+ GRFLTK++G Y+IV VG V+D+ 
Sbjct  119  AQTTYDWHIPTRDQIESLVMLARDSKLSSTLNSEYLKGRFLTKNDGSYNIVTVGNVADSE  178

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVNELSK  240
            PVKLPA+VSKRGLMGT+ +VNA+P EI+P+IK+Y +  S+L PG +  A +EYDV+EL K
Sbjct  179  PVKLPAVVSKRGLMGTSDIVNALPTEIFPNIKIYSA--SQLTPGNTFRAQMEYDVSELEK  236

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSNNLTGKKLYNVSTNDMHNGY  300
            HGY++L D+   V+VGVP ++ GVIY PVY+E     + +NN+ GK++Y  STND+ NG+
Sbjct  237  HGYSDLSDISATVIVGVPSGN-GVIYAPVYQEKSFIVHHTNNFPGKQIYTFSTNDLGNGF  295

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            +WSNTMFSN++Y+TQ++LTK DGSGV+LYSKAYSE+FK
Sbjct  296  QWSNTMFSNPKYRTQVVLTKTDGSGVRLYSKAYSEKFK  333

3) tcpF in NC_009457


> AF306795|1|G1|11139675|AAG31789.1|Vibrio_cholerae_SCE4|+|142..1143|tcpF|-|toxin 
co-regulated pilus biosynthesis protein F
Length=333

 Score =  394 bits (1482),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 226/338 (67%), Positives = 289/338 (86%), Gaps = 5/338 (1%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            M+YKKTLM+SIMITSFNS AFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIK+GMS
Sbjct  1    MKYKKTLMFSIMITSFNSSAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKLGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RD+L+NCV VSFPTS ++FY+AYP+   + +K RTKEDF ARLL+GDY +L+K Y+D+YL
Sbjct  61   RDFLDNCVTVSFPTSSELFYGAYPA--DEEGKKRTKEDFQARLLSGDYAGLEKYYVDYYL  118

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTT+DW+IPTRDQIE+LV  A ++KLS++LN EY+ GRFLTK++G Y+IV VG V+D+ 
Sbjct  119  AQTTYDWHIPTRDQIESLVMLARDSKLSSTLNSEYLKGRFLTKNDGSYNIVTVGNVADSE  178

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVNELSK  240
            PVKLPA+VSKRGLMGT+ +VNA+P EI+P+IK+Y +  S+L PG +  A +EYDV+EL K
Sbjct  179  PVKLPAVVSKRGLMGTSDIVNALPTEIFPNIKIYSA--SQLTPGNTFRAQMEYDVSELEK  236

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSNNLTGKKLYNVSTNDMHNGY  300
            HGY++L D+   V+VGVP ++ GVIY PVY+E     + +NN+ GK++Y  STND+ NG+
Sbjct  237  HGYSDLSDISATVIVGVPSGN-GVIYAPVYQEKSFIVHHTNNFPGKQIYTFSTNDLGNGF  295

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            +WSNTMFSN++Y+TQ++LTK DGSGV+LYSKAYSE+FK
Sbjct  296  QWSNTMFSNPKYRTQVVLTKTDGSGVRLYSKAYSEKFK  333

4) VCD_003491 in NC_012668


> AF306795|1|G1|11139675|AAG31789.1|Vibrio_cholerae_SCE4|+|142..1143|tcpF|-|toxin 
co-regulated pilus biosynthesis protein F
Length=333

 Score =  394 bits (1481),  Expect = 4e-111, Method: Compositional matrix adjust.
 Identities = 226/338 (67%), Positives = 288/338 (86%), Gaps = 5/338 (1%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            M+YKKTLM+SIMITSFNS AFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIK+GMS
Sbjct  1    MKYKKTLMFSIMITSFNSSAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKLGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RD+L+NCV VSFPTS ++FY+AYP+   + +K RTKEDF ARLL+GDY +L+K Y+D+YL
Sbjct  61   RDFLDNCVTVSFPTSSELFYGAYPA--DEEGKKRTKEDFQARLLSGDYAGLEKYYVDYYL  118

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTT+DW+IPTRDQIE+LV  A ++KLS++LN EY+ GRFLTK++G Y+IV VG V+D+ 
Sbjct  119  AQTTYDWHIPTRDQIESLVMLARDSKLSSTLNSEYLKGRFLTKNDGSYNIVTVGNVADSE  178

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240
            PVKLPA+VSKRGLMGT+ +VNA+P EI+P+IK+Y +  S+L PG +  A +EYDVSEL K
Sbjct  179  PVKLPAVVSKRGLMGTSDIVNALPTEIFPNIKIYSA--SQLTPGNTFRAQMEYDVSELEK  236

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY  300
            HGY++L D+   V+VGVP ++ GVIY PVY+E     + + N+ GK++Y  STND+ NG+
Sbjct  237  HGYSDLSDISATVIVGVPSGN-GVIYAPVYQEKSFIVHHTNNFPGKQIYTFSTNDLGNGF  295

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            +WSNTMFSN++Y+TQ++LTK DGSGV+LYSKAYSE+FK
Sbjct  296  QWSNTMFSNPKYRTQVVLTKTDGSGVRLYSKAYSEKFK  333

5) Vch1786_I0343 in NC_016445


> AF306795|1|G1|11139675|AAG31789.1|Vibrio_cholerae_SCE4|+|142..1143|tcpF|-|toxin 
co-regulated pilus biosynthesis protein F
Length=333

 Score =  394 bits (1481),  Expect = 4e-111, Method: Compositional matrix adjust.
 Identities = 226/338 (67%), Positives = 288/338 (86%), Gaps = 5/338 (1%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            M+YKKTLM+SIMITSFNS AFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIK+GMS
Sbjct  1    MKYKKTLMFSIMITSFNSSAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKLGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RD+L+NCV VSFPTS ++FY+AYP+   + +K RTKEDF ARLL+GDY +L+K Y+D+YL
Sbjct  61   RDFLDNCVTVSFPTSSELFYGAYPA--DEEGKKRTKEDFQARLLSGDYAGLEKYYVDYYL  118

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTT+DW+IPTRDQIE+LV  A ++KLS++LN EY+ GRFLTK++G Y+IV VG V+D+ 
Sbjct  119  AQTTYDWHIPTRDQIESLVMLARDSKLSSTLNSEYLKGRFLTKNDGSYNIVTVGNVADSE  178

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240
            PVKLPA+VSKRGLMGT+ +VNA+P EI+P+IK+Y +  S+L PG +  A +EYDVSEL K
Sbjct  179  PVKLPAVVSKRGLMGTSDIVNALPTEIFPNIKIYSA--SQLTPGNTFRAQMEYDVSELEK  236

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY  300
            HGY++L D+   V+VGVP ++ GVIY PVY+E     + + N+ GK++Y  STND+ NG+
Sbjct  237  HGYSDLSDISATVIVGVPSGN-GVIYAPVYQEKSFIVHHTNNFPGKQIYTFSTNDLGNGF  295

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            +WSNTMFSN++Y+TQ++LTK DGSGV+LYSKAYSE+FK
Sbjct  296  QWSNTMFSNPKYRTQVVLTKTDGSGVRLYSKAYSEKFK  333

6) VC0837 in NC_002505


> AF306795|1|G1|11139675|AAG31789.1|Vibrio_cholerae_SCE4|+|142..1143|tcpF|-|toxin 
co-regulated pilus biosynthesis protein F
Length=333

 Score =  394 bits (1481),  Expect = 4e-111, Method: Compositional matrix adjust.
 Identities = 226/338 (67%), Positives = 288/338 (86%), Gaps = 5/338 (1%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            M+YKKTLM+SIMITSFNS AFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIK+GMS
Sbjct  1    MKYKKTLMFSIMITSFNSSAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKLGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RD+L+NCV VSFPTS ++FY+AYP+   + +K RTKEDF ARLL+GDY +L+K Y+D+YL
Sbjct  61   RDFLDNCVTVSFPTSSELFYGAYPA--DEEGKKRTKEDFQARLLSGDYAGLEKYYVDYYL  118

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTT+DW+IPTRDQIE+LV  A ++KLS++LN EY+ GRFLTK++G Y+IV VG V+D+ 
Sbjct  119  AQTTYDWHIPTRDQIESLVMLARDSKLSSTLNSEYLKGRFLTKNDGSYNIVTVGNVADSE  178

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240
            PVKLPA+VSKRGLMGT+ +VNA+P EI+P+IK+Y +  S+L PG +  A +EYDVSEL K
Sbjct  179  PVKLPAVVSKRGLMGTSDIVNALPTEIFPNIKIYSA--SQLTPGNTFRAQMEYDVSELEK  236

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGY  300
            HGY++L D+   V+VGVP ++ GVIY PVY+E     + + N+ GK++Y  STND+ NG+
Sbjct  237  HGYSDLSDISATVIVGVPSGN-GVIYAPVYQEKSFIVHHTNNFPGKQIYTFSTNDLGNGF  295

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            +WSNTMFSN++Y+TQ++LTK DGSGV+LYSKAYSE+FK
Sbjct  296  QWSNTMFSNPKYRTQVVLTKTDGSGVRLYSKAYSEKFK  333

7) O3Y_03895 in NC_016944


> AF306795|1|G1|11139675|AAG31789.1|Vibrio_cholerae_SCE4|+|142..1143|tcpF|-|toxin 
co-regulated pilus biosynthesis protein F
Length=333

 Score =  393 bits (1479),  Expect = 5e-111, Method: Compositional matrix adjust.
 Identities = 226/338 (67%), Positives = 288/338 (86%), Gaps = 5/338 (1%)

Query  1    MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMS  60
            M+YKKTLM+SIMITSFNS AFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIK+GMS
Sbjct  1    MKYKKTLMFSIMITSFNSSAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKLGMS  60

Query  61   RDYLENCVKVSFPTSQDMFYDAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYL  120
            RD+L+NCV VSFPTS ++FY+AYP+   + +K RTKEDF ARLL+GDY +L+K Y+D+YL
Sbjct  61   RDFLDNCVTVSFPTSSELFYGAYPA--DEEGKKRTKEDFQARLLSGDYAGLEKYYVDYYL  118

Query  121  AQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRFLTKENGRYDIVNVGGVPDNT  180
            AQTT+DW+IPTRDQIE+LV  A ++KLS++LN EY+ GRFLTK++G Y+IV VG V+D+ 
Sbjct  119  AQTTYDWHIPTRDQIESLVMLARDSKLSSTLNSEYLKGRFLTKNDGSYNIVTVGNVADSE  178

Query  181  PVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK  240
            PVKLPA+VSKRGLMGT+ +VNA+P EI+P+IK+Y +  S+L PG +  A +EYDVSEL K
Sbjct  179  PVKLPAVVSKRGLMGTSDIVNALPTEIFPNIKIYSA--SQLTPGNTFRAQMEYDVSELEK  236

Query  241  HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDVHNGY  300
            HGY++L D+   V+VGVP ++ GVIY PVY+E     + + N+ GK++Y  STND+ NG+
Sbjct  237  HGYSDLSDISATVIVGVPSGN-GVIYAPVYQEKSFIVHHTNNFPGKQIYTFSTNDLGNGF  295

Query  301  KWSNTMFSNSNYKTQILLTKGDGSGVKLYSKAYSENFK  338
            +WSNTMFSN++Y+TQ++LTK DGSGV+LYSKAYSE+FK
Sbjct  296  QWSNTMFSNPKYRTQVVLTKTDGSGVRLYSKAYSEKFK  333