Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
major pilin subunit PapA |
NC_017631 (Escherichia coli ABU 83972) |
2e-40 |
79 |
|
PapA protein |
NC_017644 (Escherichia coli NA114) |
5e-38 |
75 |
|
P-fimbriae major subunit |
NC_011751 (Escherichia coli UMN026) |
2e-37 |
77 |
|
major pilin protein PapA |
NC_017646 (Escherichia coli CE10) |
2e-33 |
68 |
|
major pilin protein PapA |
NC_011742 (Escherichia coli S88) |
1e-30 |
66 |
|
major pilin protein PapA |
NC_017632 (Escherichia coli UM146) |
5e-31 |
65 |
|
major pilin subunit PapA |
NC_007946 (Escherichia coli UTI89) |
5e-31 |
65 |
|
major fibrial protein |
NC_008563 (Escherichia coli APEC O1) |
7e-31 |
66 |
|
PixA protein |
NC_008253 (Escherichia coli 536) |
7e-20 |
48 |
|
P pilus assembly protein, pilin FimA |
NC_020796 (Edwardsiella tarda C07-087) |
1e-17 |
49 |
|
P pilus assembly protein, pilin FimA |
NC_017309 (Edwardsiella tarda FL6-60) |
2e-17 |
49 |
|
P pilus assembly protein, pilin FimA |
NC_013508 (Edwardsiella tarda EIB202) |
2e-17 |
49 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AF081285' AND ph.id_pai_orf='1' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc