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Homologs of afaF gene of AF072900

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) UM146_21695
( YP_006113179.1 )

pap operon regulatory protein PapI

NC_017632
(Escherichia coli UM146)

3e-10

2) papI
( YP_543831.1 )

pap operon regulatory protein PapI

NC_007946
(Escherichia coli UTI89)

3e-10

3) ECABU_c32680
( YP_006107267.1 )

major pilus subunit operon regulatory protein PapI

NC_017631
(Escherichia coli ABU 83972)

4e-10

4) papI1
( YP_006145444.1 )

pap operon regulatory protein PapI

NC_017646
(Escherichia coli CE10)

4e-10

5) papI
( YP_002409321.1 )

pap operon regulatory protein PapI

NC_011750
(Escherichia coli IAI39)

4e-10

6) papI
( YP_006108767.1 )

pap operon regulatory protein PapI

NC_017631
(Escherichia coli ABU 83972)

5e-10

7) papI
( YP_006155368.1 )

PapI protein

NC_017652
(Escherichia coli clone D i14)

5e-10

8) papI
( YP_006150449.1 )

PapI protein

NC_017651
(Escherichia coli clone D i2)

5e-10

9) papI_2
( NP_757037.1 )

PapI protein

NC_004431
(Escherichia coli CFT073)

7e-10

10) ECP_0291
( YP_668225.1 )

fimbrial transcription regulator protein FaeA

NC_008253
(Escherichia coli 536)

7e-10

11) sfaC
( YP_006105222.1 )

putative F1C and S fimbrial switch regulatory protein SfaC

NC_017631
(Escherichia coli ABU 83972)

8e-10

12) ECOK1_1096
( YP_006100304.1 )

hypothetical protein

NC_017628
(Escherichia coli IHE3034)

8e-10

13) ECOPMV1_01067
( YP_008570953.1 )

P fimbrial regulatory protein KS71A

NC_022370
(Escherichia coli PMV-1)

8e-10

14) UM146_12370
( YP_006111355.1 )

fimbrial transcription regulator protein FaeA

NC_017632
(Escherichia coli UM146)

8e-10

15) papI2
( YP_006146814.1 )

pap operon regulatory protein PapI

NC_017646
(Escherichia coli CE10)

8e-10

16) papI
( YP_002410448.1 )

pap operon regulatory protein PapI

NC_011750
(Escherichia coli IAI39)

8e-10

17) papI
( YP_006141865.1 )

Pap operon regulatory protein

NC_017644
(Escherichia coli NA114)

8e-10

18) papI
( YP_002392886.1 )

pap operon regulatory protein PapI

NC_011742
(Escherichia coli S88)

8e-10

19) papI
( NP_755468.1 )

PapI protein

NC_004431
(Escherichia coli CFT073)

9e-10

20) papI
( YP_002414019.1 )

pap operon regulatory protein PapI

NC_011751
(Escherichia coli UMN026)

9e-10

• Sequence Alignments

1) UM146_21695 in NC_017632


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 57.9 bits (200),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 30/58 (52%), Positives = 44/58 (76%), Gaps = 1/58 (1%)

Query  5   MKNEILEFLNRHNGG-KTAEIAEALAVTDYQARYYLLLLEKEGMVQRSPLRRGMATYW  61
           MK++IL FL   +   +T+EIA  ++++ YQARYYL+ LEKEG ++RSP+RRG +T W
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLW  58

2) papI in NC_007946


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 57.9 bits (200),  Expect = 3e-10, Method: Compositional matrix adjust.
 Identities = 30/58 (52%), Positives = 44/58 (76%), Gaps = 1/58 (1%)

Query  5   MKNEILEFLNRHNGG-KTAEIAEALAVTDYQARYYLLLLEKEGMVQRSPLRRGMATYW  61
           MK++IL FL   +   +T+EIA  ++++ YQARYYL+ LEKEG ++RSP+RRG +T W
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLW  58

3) ECABU_c32680 in NC_017631


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 57.4 bits (198),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 30/62 (49%), Positives = 47/62 (76%), Gaps = 1/62 (1%)

Query  1   MKNEILEFLNRHNGG-KTAEIAEALAVTDYQARYYLLLLEKEGVVQRSPLRRGMATYWLL  59
           MK++IL FL   +   +T+EIA  ++++ YQARYYL+ LEKEG ++RSP+RRG +T W +
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLWEM  60

Query  60  KG  61
           ++
Sbjct  61  NS  62

4) papI in NC_011750


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 57.4 bits (198),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 30/62 (49%), Positives = 47/62 (76%), Gaps = 1/62 (1%)

Query  5   MKNEILEFLNRHNGG-KTAEIAEALAVTDYQARYYLLLLEKEGVVQRSPLRRGMATYWLL  63
           MK++IL FL   +   +T+EIA  ++++ YQARYYL+ LEKEG ++RSP+RRG +T W +
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLWEM  60

Query  64  KG  65
           ++
Sbjct  61  NS  62

5) papI1 in NC_017646


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 57.4 bits (198),  Expect = 4e-10, Method: Compositional matrix adjust.
 Identities = 30/62 (49%), Positives = 47/62 (76%), Gaps = 1/62 (1%)

Query  1   MKNEILEFLNRHNGG-KTAEIAEALAVTDYQARYYLLLLEKEGVVQRSPLRRGMATYWLL  59
           MK++IL FL   +   +T+EIA  ++++ YQARYYL+ LEKEG ++RSP+RRG +T W +
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLWEM  60

Query  60  KG  61
           ++
Sbjct  61  NS  62

6) papI in NC_017631


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 57.4 bits (198),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 30/58 (52%), Positives = 44/58 (76%), Gaps = 1/58 (1%)

Query  1   MKNEILEFLNRHNGG-KTAEIAEALAVTDYQARYYLLLLEKEGVVQRSPLRRGMATYW  57
           MK++IL FL   +   +T+EIA  ++++ YQARYYL+ LEKEG ++RSP+RRG +T W
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLW  58

7) papI in NC_017652


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 57.4 bits (198),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 30/62 (49%), Positives = 47/62 (76%), Gaps = 1/62 (1%)

Query  5   MKNEILEFLNRHNGG-KTAEIAEALAVTDYQARYYLLLLEKEGVVQRSPLRRGMATYWLL  63
           MK++IL FL   +   +T+EIA  ++++ YQARYYL+ LEKEG ++RSP+RRG +T W +
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLWEM  60

Query  64  KG  65
           ++
Sbjct  61  NS  62

8) papI in NC_017651


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 57.4 bits (198),  Expect = 5e-10, Method: Compositional matrix adjust.
 Identities = 30/62 (49%), Positives = 47/62 (76%), Gaps = 1/62 (1%)

Query  5   MKNEILEFLNRHNGG-KTAEIAEALAVTDYQARYYLLLLEKEGVVQRSPLRRGMATYWLL  63
           MK++IL FL   +   +T+EIA  ++++ YQARYYL+ LEKEG ++RSP+RRG +T W +
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLWEM  60

Query  64  KG  65
           ++
Sbjct  61  NS  62

9) papI_2 in NC_004431


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 56.8 bits (196),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 43/58 (75%), Gaps = 1/58 (1%)

Query  1   MKNEILEFLNRHNGG-KTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMATYW  57
           MK++IL FL   +   +T+EIA  ++++ YQARYYL+ LEK G ++RSP+RRG +T W
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLW  58

10) ECP_0291 in NC_008253


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 56.6 bits (195),  Expect = 7e-10, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 45/58 (78%), Gaps = 1/58 (1%)

Query  1   MQNEIMGFLSRHNVG-KTAEIAEALAVTDYQARYYLLLLEKEGMVQRSPLRRGMATYW  57
           M+++I+ FL+  +   +T+EIA  ++++ YQARYYL+ LEKEG ++RSP+RRG +T W
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLW  58

11) sfaC in NC_017631


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 56.6 bits (195),  Expect = 8e-10, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 45/58 (78%), Gaps = 1/58 (1%)

Query  1   MQNEIMGFLSRHNGG-KTAEIAEALAVTDYQARYYLLLLEKEGMVQRSPLRRGMATYW  57
           M+++I+ FL+  +   +T+EIA  ++++ YQARYYL+ LEKEG ++RSP+RRG +T W
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLW  58

12) ECOK1_1096 in NC_017628


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 56.6 bits (195),  Expect = 8e-10, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 45/58 (78%), Gaps = 1/58 (1%)

Query  1   MQNEIMGFLSRHNGG-KTAEIAEALAVTDYQARYYLLLLEKEGMVQRSPLRRGMATYW  57
           M+++I+ FL+  +   +T+EIA  ++++ YQARYYL+ LEKEG ++RSP+RRG +T W
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLW  58

13) ECOPMV1_01067 in NC_022370


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 56.6 bits (195),  Expect = 8e-10, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 45/58 (78%), Gaps = 1/58 (1%)

Query  1   MQNEIMGFLSRHNGG-KTAEIAEALAVTDYQARYYLLLLEKEGMVQRSPLRRGMATYW  57
           M+++I+ FL+  +   +T+EIA  ++++ YQARYYL+ LEKEG ++RSP+RRG +T W
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLW  58

14) UM146_12370 in NC_017632


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 56.6 bits (195),  Expect = 8e-10, Method: Compositional matrix adjust.
 Identities = 28/58 (49%), Positives = 45/58 (78%), Gaps = 1/58 (1%)

Query  1   MQNEIMGFLSRHNGG-KTAEIAEALAVTDYQARYYLLLLEKEGMVQRSPLRRGMATYW  57
           M+++I+ FL+  +   +T+EIA  ++++ YQARYYL+ LEKEG ++RSP+RRG +T W
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLW  58

15) papI in NC_011750


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 56.6 bits (195),  Expect = 8e-10, Method: Compositional matrix adjust.
 Identities = 29/62 (47%), Positives = 45/62 (73%), Gaps = 1/62 (1%)

Query  5   MKNEILEFLNRHDGG-KTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMATYWLL  63
           MK++IL FL       +T+EIA  ++++ YQARYYL+ LEK G ++RSP+RRG +T W +
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLWEM  60

Query  64  KG  65
           ++
Sbjct  61  NS  62

16) papI in NC_017644


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 56.6 bits (195),  Expect = 8e-10, Method: Compositional matrix adjust.
 Identities = 29/62 (47%), Positives = 45/62 (73%), Gaps = 1/62 (1%)

Query  1   MKNEILEFLNRHDGG-KTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMATYWLL  59
           MK++IL FL       +T+EIA  ++++ YQARYYL+ LEK G ++RSP+RRG +T W +
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLWEM  60

Query  60  KG  61
           ++
Sbjct  61  NS  62

17) papI2 in NC_017646


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 56.6 bits (195),  Expect = 8e-10, Method: Compositional matrix adjust.
 Identities = 29/62 (47%), Positives = 45/62 (73%), Gaps = 1/62 (1%)

Query  1   MKNEILEFLNRHDGG-KTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMATYWLL  59
           MK++IL FL       +T+EIA  ++++ YQARYYL+ LEK G ++RSP+RRG +T W +
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLWEM  60

Query  60  KG  61
           ++
Sbjct  61  NS  62

18) papI in NC_011742


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 56.6 bits (195),  Expect = 8e-10, Method: Compositional matrix adjust.
 Identities = 29/62 (47%), Positives = 45/62 (73%), Gaps = 1/62 (1%)

Query  5   MKNEILEFLNRHDGG-KTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMATYWLL  63
           MK++IL FL       +T+EIA  ++++ YQARYYL+ LEK G ++RSP+RRG +T W +
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLWEM  60

Query  64  KG  65
           ++
Sbjct  61  NS  62

19) papI in NC_004431


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 56.3 bits (194),  Expect = 9e-10, Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 42/58 (73%), Gaps = 1/58 (1%)

Query  5   MKNEILEFLNRHDGG-KTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMATYW  61
           MK++IL FL       +T+EIA  ++++ YQARYYL+ LEK G ++RSP+RRG +T W
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLW  58

20) papI in NC_011751


> AF072900|1|G1|13236677|AAK16195.1|Escherichia_coli_AL862|-|37..225|afaF|-|AfaF
Length=62

 Score = 56.3 bits (194),  Expect = 9e-10, Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 42/58 (73%), Gaps = 1/58 (1%)

Query  5   MKNEILEFLNRHDGG-KTAEIAEALAVTDYQARYYLLLLEKAGMVQRSPLRRGMATYW  61
           MK++IL FL       +T+EIA  ++++ YQARYYL+ LEK G ++RSP+RRG +T W
Sbjct  1   MKDNILTFLTELKTPCRTTEIAIHFGLSAYQARYYLMNLEKEGKIKRSPVRRGASTLW  58