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Homologs of hrcJ gene of AF069651

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrcJ
( YP_273534.1 )

type III secretion component protein HrcJ

NC_005773
(Pseudomonas syringae 1448A)

3e-94

2) HrcJ
( YP_234287.1 )

type III secretion protein HrcJ

NC_007005
(Pseudomonas syringae B728a)

4e-94

3) hrcJ
( NP_791211.1 )

type III secretion protein HrcJ

NC_004578
(Pseudomonas syringae DC3000)

8e-92

4) Pmen_0028
( YP_001185535.1 )

YscJ/HrcJ family type III secretion apparatus lipoprotein

NC_009439
(Pseudomonas mendocina ymp)

2e-73

5) rscJ
( YP_006322242.1 )

type III secretion apparatus lipoprotein RscJ

NC_017911
(Pseudomonas fluorescens A506)

4e-65

6) rscJ
( YP_002870391.1 )

putative type III secretion protein

NC_012660
(Pseudomonas fluorescens SBW25)

1e-62

7) hrcJ
( YP_050190.1 )

type III secretion system protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

6e-58

8) Marme_1087
( YP_004312198.1 )

YscJ/HrcJ family type III secretion apparatus lipoprotein

NC_015276
(Marinomonas mediterranea MMB-1)

8e-58

9) PC1_2197
( YP_003017772.1 )

YscJ/HrcJ family type III secretion apparatus lipoprotein

NC_012917
(Pectobacterium carotovorum PC1)

1e-57

10) PCC21_022750
( YP_006646931.1 )

type III secretion protein

NC_018525
(Pectobacterium carotovorum PCC21)

1e-57

11) Ser39006_2905
( YP_008523287.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_022268
(Serratia sp. ATCC 39006)

2e-57

12) hrcJ
( YP_001906477.1 )

HrcJ protein

NC_010694
(Erwinia tasmaniensis Et1/99)

1e-56

13) Dd1591_1899
( YP_003004228.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_012912
(Dickeya zeae Ech1591)

2e-56

14) hrcJ
( YP_005804077.1 )

type III secretion innermembrane protein HrcJ

NC_017390
(Erwinia pyrifoliae DSM 12163)

3e-56

15) hrcJ
( YP_002650060.1 )

Hrp/hrc secretion/translocation pathway protein HrcJ

NC_012214
(Erwinia pyrifoliae Ep1/96)

3e-56

16) hrcJ
( YP_005818269.1 )

hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrcJ protein

NC_017445
(Erwinia sp. Ejp617)

6e-56

17) Dd586_1896
( YP_003333460.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_013592
(Dickeya dadantii Ech586)

6e-56

18) hrcJ
( YP_003539952.1 )

type III secretion system protein

NC_013971
(Erwinia amylovora ATCC 49946)

9e-56

19) hrcJ
( YP_003529902.1 )

type III secretion inner-membrane protein HrcJ

NC_013961
(Erwinia amylovora CFBP1430)

9e-56

20) D781_3927
( YP_007346302.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_020064
(Serratia marcescens FGI94)

2e-55

21) hrcJ
( YP_003883232.1 )

type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ)

NC_014500
(Dickeya dadantii 3937)

1e-54

22) yscJ
( YP_005082216.1 )

Yop proteins translocation J

NC_016642
(Pseudovibrio sp. FO-BEG1)

2e-34

23) nolT
( YP_006397497.1 )

nodulation protein NolT

NC_018000
(Sinorhizobium fredii USDA 257)

8e-30

24) G655_16560
( YP_007710152.1 )

pscJ type III export protein

NC_020912
(Pseudomonas aeruginosa B136-33)

4e-28

25) PADK2_17080
( YP_006483397.1 )

pscJ type III export protein

NC_018080
(Pseudomonas aeruginosa DK2)

4e-28

26) pscJ
( YP_002441191.1 )

type III export protein PscJ

NC_011770
(Pseudomonas aeruginosa LESB58)

4e-28

27) pscJ
( YP_005975908.1 )

type III export protein PscJ

NC_017548
(Pseudomonas aeruginosa M18)

4e-28

28) pscJ
( YP_005980865.1 )

pscJ type III export protein

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

4e-28

29) pscJ
( NP_250414.1 )

type III export protein PscJ

NC_002516
(Pseudomonas aeruginosa PAO1)

4e-28

30) pscJ
( YP_791522.1 )

pscJ type III export protein

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

4e-28

31) sctJ
( YP_003039868.1 )

type iii secretion component protein sctj

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

2e-27

32) sctJ
( NP_930991.1 )

Type III secretion component protein SctJ

NC_005126
(Photorhabdus luminescens TTO1)

8e-27

• Sequence Alignments

1) hrcJ in NC_005773


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  337 bits (1264),  Expect = 3e-94, Method: Compositional matrix adjust.
 Identities = 239/248 (97%), Positives = 242/248 (98%), Gaps = 0/248 (0%)

Query  21   DETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGLPR  80
            DETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGLPR
Sbjct  21   DETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGLPR  80

Query  81   QSRASLGDIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAPG  140
            QSRASLGDIFKKEGVISTPLEERARYIYALSQELEAT SQIDGVIVARVHVVLPERIAPG
Sbjct  81   QSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIAPG  140

Query  141  EPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEFQE  200
            EPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEFQE
Sbjct  141  EPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEFQE  200

Query  201  TTQWASFGPFKLDSEELPFWHLMlwlvpagvvvllliialllRSDWRAALLRRIGFGARS  260
            TTQWASFGPFKLDSEELPFWHLMLWLVPAGVV+LLLIIALLLR+DW AALL RI F A +
Sbjct  201  TTQWASFGPFKLDSEELPFWHLMLWLVPAGVVLLLLIIALLLRNDWGAALLPRIWFWAPN  260

Query  261  RSTVPARA  268
            RSTVPARA
Sbjct  261  RSTVPARA  268

2) HrcJ in NC_007005


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  337 bits (1264),  Expect = 4e-94, Method: Compositional matrix adjust.
 Identities = 244/268 (92%), Positives = 257/268 (96%), Gaps = 0/268 (0%)

Query  1    MKFLSAGLLLICMVLLGGCSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVT  60
            MKFLSAGLLL+ M+LLGGCSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVT
Sbjct  1    MKFLSAGLLLFGMLLLGGCSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVT  60

Query  61   VATSDMNRAVRVLNAAGLPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATLSQ  120
            VATSDMNRAVRVLNAAGLPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEAT SQ
Sbjct  61   VATSDMNRAVRVLNAAGLPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQ  120

Query  121  IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMST  180
            IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMS+
Sbjct  121  IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSA  180

Query  181  QSAESKKFSIVFVPATEFQETTQWVSFGPFKLDSANLPFWNLMlwlvpvglavllliial  240
            QSAESKKFSIVFVPATEFQETTQW SFGPFKLDS +LPFW+LMLWLVP G+ +LLLIIAL
Sbjct  181  QSAESKKFSIVFVPATEFQETTQWASFGPFKLDSEELPFWHLMLWLVPAGVVLLLLIIAL  240

Query  241  llRSDWRASVLGRIGLAGRSRSTVPARA  268
            LLR+DW A++L RI + + +RSTVPARA
Sbjct  241  LLRNDWGAALLPRIWFWAPNRSTVPARA  268

3) hrcJ in NC_004578


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  329 bits (1234),  Expect = 8e-92, Method: Compositional matrix adjust.
 Identities = 232/268 (87%), Positives = 253/268 (95%), Gaps = 0/268 (0%)

Query  1    MNFLSAgllllcmlllggcSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVT  60
            M+FLSAGLLL+ MLLLGGCSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVT
Sbjct  1    MKFLSAGLLLFGMLLLGGCSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVT  60

Query  61   VATSEMNRAVRVLDAAGLPRRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQ  120
            VATS+MNRAVRVL+AAGLPR+SR++LG+IFKKEGVISTPLEERARYIYALSQELEAT SQ
Sbjct  61   VATSDMNRAVRVLNAAGLPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQ  120

Query  121  IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMST  180
            IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMS+
Sbjct  121  IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSA  180

Query  181  QSVDSKKFSIVFVPAAEFQETTQWVSFGPFKLDSTNLPFWNLMlwvapvglalvlligal  240
            QS +SKKFSIVFVPA+EFQETTQW SFGPFKLDS +LPFW+LMLW+ P G+ L+LLI AL
Sbjct  181  QSAESKKFSIVFVPATEFQETTQWASFGPFKLDSEELPFWHLMLWLVPAGVVLLLLIIAL  240

Query  241  lvRSDWRASLLRRIGFGSRGRSTLPARA  268
            L+R+DW A+LL RI F +  RST+PARA
Sbjct  241  LLRNDWGAALLPRIWFWAPNRSTVPARA  268

4) Pmen_0028 in NC_009439


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  268 bits (1002),  Expect = 2e-73, Method: Compositional matrix adjust.
 Identities = 168/249 (68%), Positives = 216/249 (87%), Gaps = 1/249 (0%)

Query  18   CSDRTDLFSGLSELDANEVIASLGEHRISARKRAEKAGVVVTVDTAEINRAVRVLEAAGL  77
            CSD TDLF+GLSE D+NEV+A L++++I ARKR EK+GVVVTV T+++NRAVRVL+AAGL
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGL  78

Query  78   PRRARTSLGEIFKKEGVISTPLEERARYIYALSQELESTLSQIDGVIVARVHVVLPERIA  137
            PR++R+SLG+IFKKEGVISTPLEERARYIYALSQELE+T SQIDGVIVARVHVVLPERIA
Sbjct  79   PRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIA  138

Query  138  PGEPVQPASAAVFIKHAASLEPDAVQRRIQQMVVSSIPGLASTGVESSEKFSIVFVPAAE  197
            PGEPVQPASAAVFIKH+A+L+PD+V+ RIQQMV SSIPG+++ + ES  KFSIVFVPA+E
Sbjct  139  PGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESK-KFSIVFVPATE  197

Query  198  LQDADTLVPFGPFLIESQKLGFWQlmswliplggllllavltllVRQDWRSVLLRRVRPR  257
            +Q++    +FGPF ++S+ L FW+LM WL+P G +LLL +++LL+R+DW + LL R++ +
Sbjct  198  FQETTQWASFGPFKLDSEELPFWHLMLWLVPAGVVLLLLIIALLLRNDWGAALLPRIWFW  257

Query  258  QPASHNVST  266
             P    V++
Sbjct  258  APNRSTVPA  266

5) rscJ in NC_017911


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  240 bits (896),  Expect = 4e-65, Method: Compositional matrix adjust.
 Identities = 132/203 (66%), Positives = 172/203 (85%), Gaps = 0/203 (0%)

Query  20   CGDRVELHRQLSEQEANEVVAELADKHIRAQKTPAKDGVVVTVNTNDIGRAVRTLEAAGL  79
            C+D  +L   LSEQ++NEVVA LAD+HI A+K   K GVVVTV T+D+ RAVR L+AAGL
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGL  78

Query  80   PRLARTTMGDTFRKEGVISTPLEERARYIYALSQELETTLSKIDGVIVARVHVVLPERIA  139
            PR +R+++GD F+KEGVISTPLEERARYIYALSQELE+T S+IDGVIVARVHVVLPERIA
Sbjct  79   PRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIA  138

Query  140  PGEPVQPASASVFIKHDPRLDPDNIRARVRRMVASSIPGMTTAVDNPQKLTVVFVPASTY  199
            PGEPVQPASA+VFIKH + LDPD++R+R+++MVASSIPGM++   +++K+++VFVPA+ +
Sbjct  139  PGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEF  198

Query  200  QEQQRLVYFGPFLVPGDDLGFWR  222
            QE  +   FGPF + +++L FW+
Sbjct  199  QETTQWASFGPFKLDSEELPFWH  221

6) rscJ in NC_012660


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  232 bits (865),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 129/202 (64%), Positives = 168/202 (84%), Gaps = 0/202 (0%)

Query  27   CGDRVELHRQLSEQEANEVIAELADKHIRARKIPTKDGVTVSVDTNDIGRAVRTLEAVGL  86
            C+D  +L   LSEQ++NEV+A LAD+HI ARK   K GV V+V T+D+ RAVR L+A GL
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGL  78

Query  87   PKLARATLGDTFRKEGVISTPLEERARYIYALSQELEATLSNIDGVIVARVHVVLPERIA  146
            P+ +RA+LGD F+KEGVISTPLEERARYIYALSQELEAT S+IDGVIVARVHVVLPERIA
Sbjct  79   PRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIA  138

Query  147  PGEPVQPASASVFIKHDPRLDPDNIRARVRRMVASSIPGMTTAVDNPQKLTVIFVPAVAY  206
            PGEPVQPASA+VFIKH + LDPD++R+R+++MVASSIPGM++   +++K++++FVPA  +
Sbjct  139  PGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEF  198

Query  207  QEQKRLVYFGPFLIPADDRSFW  228
            QE  +   FGPF + +++ +FW
Sbjct  199  QETTQWASFGPFKLDSEELPFW  220

7) hrcJ in NC_004547


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  216 bits (805),  Expect = 6e-58, Method: Compositional matrix adjust.
 Identities = 123/203 (61%), Positives = 168/203 (83%), Gaps = 2/203 (0%)

Query  18   CGEPIELNRGLSENDANEAISMLGRYQIGAEKRVEKTGVTLVIDAKNMERAVNILNAAGL  77
            C++  +L  GLSE+D+NE ++ L+  +I+A KR+EKTGV + + + +M+RAV +LNAAGL
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGL  78

Query  78   PKQSRTNLGEVFQKSGVISTPLEERARYIYALSQEVEATLAQIDGVMVARVHVVLPERIA  137
            P+QSR++LG++F+K GVISTPLEERARYIYALSQE+EAT +QIDGV+VARVHVVLPERIA
Sbjct  79   PRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIA  138

Query  138  PGEPVQPASAAVFIKYRAELEPDGMEPRIRRMVASSIPGLSGK--DDKELAIVFVPAEPY  195
            PGEPVQPASAAVFIK  A L+PD++  RI++MVASSIPG+S++  + K ++IVFVPA  +
Sbjct  139  PGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEF  198

Query  196  QDTIPVVTLGPFTLTPDEMRRWQ  218
            Q+T    ++GPF L ++E+  W+
Sbjct  199  QETTQWASFGPFKLDSEELPFWH  221

8) Marme_1087 in NC_015276


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  216 bits (804),  Expect = 8e-58, Method: Compositional matrix adjust.
 Identities = 120/199 (61%), Positives = 161/199 (81%), Gaps = 3/199 (1%)

Query  20   CQQDIELHKKLSEEDANEVIAELASRHIEAEKKATKEGVTVLVEASSMARAVRILEAAGL  79
            C ++ +L   LSE+D+NEV+A LA +HI+A K+  K GV V V +S M RAVR+L+AAGL
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGL  78

Query  80   PRKPRANFGEVFKKEGVISSPLEERARYIYALSQELESTISQIDGILIARVHVVLPERIA  139
            PR++RA++G++FKKEGVIS+PLEERARYIYALSQELE+T SQIDG+++ARVHVVLPERIA
Sbjct  79   PRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIA  138

Query  140  PGEAVQPASSAVFIKHRPDLDPDVIRPRIERLVRTSIPGLSEKPD---KLSVVFVVTKAY  196
            PGE+VQPAS+AVFIKH + LDPD +R RI+++V +SIPG+S ++    K+S+VFV +  +
Sbjct  139  PGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEF  198

Query  197  QEQQQLVRVGPFLMDASDL  215
            QE  Q    GPF +D+ +L
Sbjct  199  QETTQWASFGPFKLDSEEL  217

9) PC1_2197 in NC_012917


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  215 bits (802),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 122/203 (61%), Positives = 168/203 (83%), Gaps = 2/203 (0%)

Query  18   CGEPIELNRGLSENDANEAISMLGRYQIGAEKRVDKTGVTLVIDAKNMERAVNILNAAGL  77
            C++  +L  GLSE+D+NE ++ L+  +I+A KR++KTGV + + + +M+RAV +LNAAGL
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGL  78

Query  78   PKQSRTNLGEVFQKSGVISTPLEERARYIYALSQEVEATLAQIDGVLVARVHVVLPERIA  137
            P+QSR++LG++F+K GVISTPLEERARYIYALSQE+EAT +QIDGV+VARVHVVLPERIA
Sbjct  79   PRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIA  138

Query  138  PGEPVQPASAAVFIKYRAELEPDGMEPRIRRMVASSIPGLSGK--DDKELAIVFVPAEPY  195
            PGEPVQPASAAVFIK  A L+PD++  RI++MVASSIPG+S++  + K ++IVFVPA  +
Sbjct  139  PGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEF  198

Query  196  QDTIPVVTLGPFTLTPDEMRRWQ  218
            Q+T    ++GPF L ++E+  W+
Sbjct  199  QETTQWASFGPFKLDSEELPFWH  221

10) PCC21_022750 in NC_018525


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  215 bits (801),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 122/203 (61%), Positives = 168/203 (83%), Gaps = 2/203 (0%)

Query  18   CGEPIELNRGLSENDANEAISMLGRYQIGAEKRVDKTGVTLVIDAKNMERAVNILNAAGL  77
            C++  +L  GLSE+D+NE ++ L+  +I+A KR++KTGV + + + +M+RAV +LNAAGL
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGL  78

Query  78   PKQSRTNLGEVFQKSGVISTPLEERARYIYALSQEVEATLAQIDGVLVARVHVVLPERIA  137
            P+QSR++LG++F+K GVISTPLEERARYIYALSQE+EAT +QIDGV+VARVHVVLPERIA
Sbjct  79   PRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIA  138

Query  138  PGEPVQPASAAVFIKYRAELEPDGMEQRIRRMVASSIPGLSGK--DDKELAIVFVPAEPY  195
            PGEPVQPASAAVFIK  A L+PD++  RI++MVASSIPG+S++  + K ++IVFVPA  +
Sbjct  139  PGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEF  198

Query  196  QDTIPVVTLGPFTLTPDEMRRWQ  218
            Q+T    ++GPF L ++E+  W+
Sbjct  199  QETTQWASFGPFKLDSEELPFWH  221

11) Ser39006_2905 in NC_022268


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  215 bits (799),  Expect = 2e-57, Method: Compositional matrix adjust.
 Identities = 121/200 (61%), Positives = 168/200 (84%), Gaps = 2/200 (1%)

Query  21   CGDQVELHRGLSENDANEVIAALGGYHIEAEKRLDKTGVTILLDKKDIDRAVNILSAAGL  80
            C+D+ +L  GLSE+D+NEV+A L++ HI+A KRL+KTGV + +   D++RAV +L+AAGL
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGL  78

Query  81   PRQARTNLGEVFQKSGVISTPLEERARYIYALSQEVESTLTQIDGVLVARVHVVLPERIA  140
            PRQ+R++LG++F+K GVISTPLEERARYIYALSQE+E+T +QIDGV+VARVHVVLPERIA
Sbjct  79   PRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIA  138

Query  141  PGEPIQPASAAVFIKYRPELEPDSIEPRIRRMVASSIPGLAGKS--DKDLAIVFVPAEPY  198
            PGEP+QPASAAVFIK  + L+PDS+  RI++MVASSIPG++++S   K ++IVFVPA  +
Sbjct  139  PGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEF  198

Query  199  IDHIPMISLGPFQFTPQEMA  218
             +     S+GPF++ ++E++
Sbjct  199  QETTQWASFGPFKLDSEELP  218

12) hrcJ in NC_010694


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  212 bits (790),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 122/197 (62%), Positives = 161/197 (82%), Gaps = 2/197 (1%)

Query  20   CDDRVELNHGLTENDANEVAAELGRYHIQAEKRNNKDGITVLVNAEELNRAVHILDAAGL  79
            C D  +L  GL+E+D+NEV A L+  HI+A KR +K G+ V V + ++NRAV++L+AAGL
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGL  78

Query  80   PRPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIA  139
            PR +R++LG++F+K+GVISTPLEERARYIYALSQE+E+T SQIDGVIVARVHVVLPERIA
Sbjct  79   PRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIA  138

Query  140  PGEPVQPASAAVFIKYRPDLDPDVIEPRIRRMVASSLPGLAARS--DKDLAIVFVPAETY  197
            PGEPVQPASAAVFIK  + LDPD +  RI++MVASS+PG++A+S   K ++IVFVPA  +
Sbjct  139  PGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEF  198

Query  198  QDKPTEVSFGPFRVTPQ  214
            Q+     SFGPF++ ++
Sbjct  199  QETTQWASFGPFKLDSE  215

13) Dd1591_1899 in NC_012912


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  212 bits (787),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 121/199 (61%), Positives = 165/199 (83%), Gaps = 2/199 (1%)

Query  22   CGDRVELHRGLSENDANEVIAALGGYHIGAEKRTDKAGVSILIDVKDMERAVNILNAAGL  81
            C+D  +L  GLSE+D+NEV+A L++ HI+A KR +K+GV + +   DM+RAV +LNAAGL
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGL  78

Query  82   PRQARTNLGQVFQKTGVISTPLEERARYIYALSQEVESTLTQIDGVLVARVHVVLPERIA  141
            PRQ+R++LG++F+K GVISTPLEERARYIYALSQE+E+T +QIDGV+VARVHVVLPERIA
Sbjct  79   PRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIA  138

Query  142  PGEPIQPASAAVFIKYRPELEPDSIEPRIRRMVASSIPGLAGKS--DKDLAIVFVPAEPY  199
            PGEP+QPASAAVFIK  + L+PDS+  RI++MVASSIPG++++S   K ++IVFVPA  +
Sbjct  139  PGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEF  198

Query  200  KDHIPKVSLGPFQLTPQTM  218
            ++     S+GPF+L ++ +
Sbjct  199  QETTQWASFGPFKLDSEEL  217

14) hrcJ in NC_017390


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  210 bits (783),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 121/198 (62%), Positives = 163/198 (83%), Gaps = 2/198 (1%)

Query  20   CNDQVELNHGLTENDANEVAAELGRYHIQAEKLANKDGITVMVDAAELNRAVHILDAAGL  79
            C+D+ +L  GL+E+D+NEV A L+  HI+A K  +K G+ V V ++++NRAV++L+AAGL
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGL  78

Query  80   PRPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIA  139
            PR +R++LG++F+K+GVISTPLEERARYIYALSQE+E+T SQIDGVIVARVHVVLPERIA
Sbjct  79   PRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIA  138

Query  140  PGEPVQPASAAVFIKYRPDLDPDIIEPRIRRMVASSLPGLAGRS--DKDLAIVFVPAESY  197
            PGEPVQPASAAVFIK  + LDPD +  RI++MVASS+PG++++S   K ++IVFVPA  +
Sbjct  139  PGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEF  198

Query  198  QDKPPKVSFGPFLVTPEQ  215
            Q+     SFGPF + +E+
Sbjct  199  QETTQWASFGPFKLDSEE  216

15) hrcJ in NC_012214


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  210 bits (783),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 121/198 (62%), Positives = 163/198 (83%), Gaps = 2/198 (1%)

Query  20   CNDQVELNHGLTENDANEVAAELGRYHIQAEKLANKDGITVMVDAAELNRAVHILDAAGL  79
            C+D+ +L  GL+E+D+NEV A L+  HI+A K  +K G+ V V ++++NRAV++L+AAGL
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGL  78

Query  80   PRPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIA  139
            PR +R++LG++F+K+GVISTPLEERARYIYALSQE+E+T SQIDGVIVARVHVVLPERIA
Sbjct  79   PRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIA  138

Query  140  PGEPVQPASAAVFIKYRPDLDPDIIEPRIRRMVASSLPGLAGRS--DKDLAIVFVPAESY  197
            PGEPVQPASAAVFIK  + LDPD +  RI++MVASS+PG++++S   K ++IVFVPA  +
Sbjct  139  PGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEF  198

Query  198  QDKPPKVSFGPFLVTPEQ  215
            Q+     SFGPF + +E+
Sbjct  199  QETTQWASFGPFKLDSEE  216

16) hrcJ in NC_017445


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  210 bits (780),  Expect = 6e-56, Method: Compositional matrix adjust.
 Identities = 121/198 (62%), Positives = 163/198 (83%), Gaps = 2/198 (1%)

Query  20   CNDQVELNHGLTENDANEVAAELGRYHIQAEKLANKDGITVMVDAAELNRAVHILDAAGL  79
            C+D+ +L  GL+E+D+NEV A L+  HI+A K  +K G+ V V ++++NRAV++L+AAGL
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGL  78

Query  80   PRPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIA  139
            PR +R++LG++F+K+GVISTPLEERARYIYALSQE+E+T SQIDGVIVARVHVVLPERIA
Sbjct  79   PRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIA  138

Query  140  PGEPVQPASAAVFIKYRPDLDPDIIEPRIRRMVASSLPGLAGRS--DKDLAIVFVPAESY  197
            PGEPVQPASAAVFIK  + LDPD +  RI++MVASS+PG++++S   K ++IVFVPA  +
Sbjct  139  PGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEF  198

Query  198  QDKPPKVSFGPFLVTPEQ  215
            Q+     SFGPF + +E+
Sbjct  199  QETTQWASFGPFKLDSEE  216

17) Dd586_1896 in NC_013592


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  210 bits (780),  Expect = 6e-56, Method: Compositional matrix adjust.
 Identities = 120/199 (61%), Positives = 165/199 (83%), Gaps = 2/199 (1%)

Query  22   CGDRVELHRGLSENDANEVIAALGGYHIGAEKRTDKAGVSILIDVKDMERSVNILNAAGL  81
            C+D  +L  GLSE+D+NEV+A L++ HI+A KR +K+GV + +   DM+R+V +LNAAGL
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGL  78

Query  82   PRQARTNLGQVFQKTGVISTPLEERARYIYALSQEVESTLTQIDGVLVARVHVVLPERIA  141
            PRQ+R++LG++F+K GVISTPLEERARYIYALSQE+E+T +QIDGV+VARVHVVLPERIA
Sbjct  79   PRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIA  138

Query  142  PGEPIQPASAAVFIKYRPELEPDSIEPRIRRMVASSIPGLAGKSE--KDLAIVFVPAEPY  199
            PGEP+QPASAAVFIK  + L+PDS+  RI++MVASSIPG++++S   K ++IVFVPA  +
Sbjct  139  PGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEF  198

Query  200  KDHIPTVSLGPFQLMPQTM  218
            ++     S+GPF+L ++ +
Sbjct  199  QETTQWASFGPFKLDSEEL  217

18) hrcJ in NC_013971


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  209 bits (778),  Expect = 9e-56, Method: Compositional matrix adjust.
 Identities = 121/197 (62%), Positives = 162/197 (83%), Gaps = 2/197 (1%)

Query  20   CNDQVELNHGLTENDANEVAAELGRYHIQAEKLTNKEGITVLVDAAELNRAVHILDAAGL  79
            C+D+ +L  GL+E+D+NEV A L+  HI+A K  +K G+ V V ++++NRAV++L+AAGL
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGL  78

Query  80   PRPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIA  139
            PR +R++LG++F+K+GVISTPLEERARYIYALSQE+E+T SQIDGVIVARVHVVLPERIA
Sbjct  79   PRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIA  138

Query  140  PGEPVQPASAAVFIKYRPDLDPDVIEPRIRRMVASSLPGLAGRS--DKDLAIVFVPAESY  197
            PGEPVQPASAAVFIK  + LDPD +  RI++MVASS+PG++++S   K ++IVFVPA  +
Sbjct  139  PGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEF  198

Query  198  QDKPPQVSFGPFLVTPE  214
            Q+     SFGPF + +E
Sbjct  199  QETTQWASFGPFKLDSE  215

19) hrcJ in NC_013961


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  209 bits (778),  Expect = 9e-56, Method: Compositional matrix adjust.
 Identities = 121/197 (62%), Positives = 162/197 (83%), Gaps = 2/197 (1%)

Query  20   CNDQVELNHGLTENDANEVAAELGRYHIQAEKLTNKEGITVLVDAAELNRAVHILDAAGL  79
            C+D+ +L  GL+E+D+NEV A L+  HI+A K  +K G+ V V ++++NRAV++L+AAGL
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGL  78

Query  80   PRPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIA  139
            PR +R++LG++F+K+GVISTPLEERARYIYALSQE+E+T SQIDGVIVARVHVVLPERIA
Sbjct  79   PRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIA  138

Query  140  PGEPVQPASAAVFIKYRPDLDPDVIEPRIRRMVASSLPGLAGRS--DKDLAIVFVPAESY  197
            PGEPVQPASAAVFIK  + LDPD +  RI++MVASS+PG++++S   K ++IVFVPA  +
Sbjct  139  PGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEF  198

Query  198  QDKPPQVSFGPFLVTPE  214
            Q+     SFGPF + +E
Sbjct  199  QETTQWASFGPFKLDSE  215

20) D781_3927 in NC_020064


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  208 bits (774),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 119/198 (61%), Positives = 165/198 (84%), Gaps = 2/198 (1%)

Query  21   CGDETVLNSNLSESDANDIVAALNHYHIAADKRVEKSGVSVLVAAADIERSVNILDAAGL  80
            C+DET L + LSE D+N++VA L + HI A KR+EK+GV V VA++D++R+V +L+AAGL
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGL  78

Query  81   PRKARTNLGEVFQKSGVISSPMEERARYIYALSQEVESTLSQIDGVVVARVHVVLPERIA  140
            PR++R++LG++F+K GVIS+P+EERARYIYALSQE+E+T SQIDGV+VARVHVVLPERIA
Sbjct  79   PRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIA  138

Query  141  PGEPVQPASASVFIKYADSLDPDSIEPRIRRLVATSIPGLVGR--EDKDLAIVFVPAKAW  198
            PGEPVQPASA+VFIK + +LDPDS+  RI+++VA+SIPG+ ++  E K ++IVFVPA   
Sbjct  139  PGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEF  198

Query  199  RDQTPVVNLGPFALTPGQ  216
            ++ T   ++GPF L + +
Sbjct  199  QETTQWASFGPFKLDSEE  216

21) hrcJ in NC_014500


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  205 bits (761),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 121/194 (63%), Positives = 162/194 (84%), Gaps = 2/194 (1%)

Query  2    ELHRGLSENDANEVIAALGGYHIGAEKRTEKTGVSILIDVKDMERAVNILNAAGLPRQAR  61
            +L  GLSE+D+NEV+A L++ HI+A KR EKTGV + +   DM+RAV +LNAAGLPRQ+R
Sbjct  24   DLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGLPRQSR  83

Query  62   TNLGQVFQKTGVISTPLEERARYIYALSQEVESTLTQIDGVLVARVHVVLPERIAPGEPI  121
            ++LG++F+K GVISTPLEERARYIYALSQE+E+T +QIDGV+VARVHVVLPERIAPGEP+
Sbjct  84   ASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERIAPGEPV  143

Query  122  QPASAAVFIKYRPELEPDSIEPRIRRMVASSIPGLAGKS--DKDLAIVFVPAEPYKDHIP  179
            QPASAAVFIK  + L+PDS+  RI++MVASSIPG++++S   K ++IVFVPA  +++   
Sbjct  144  QPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEFQETTQ  203

Query  180  TVSLGPFQLTPQTM  193
              S+GPF+L ++ +
Sbjct  204  WASFGPFKLDSEEL  217

22) yscJ in NC_016642


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  139 bits (509),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 80/189 (43%), Positives = 137/189 (73%), Gaps = 8/189 (4%)

Query  8    C--NTDLYTNLSEQEANTMLSLLLENGVSAQKVGLGDGLVTLQVDDDDIQRAVTILNANG  65
            C  +TDL+T LSEQ++N +++ L ++ + A+K  L    V + V   D++RAV +LNA G
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARK-RLEKTGVVVTVATSDMNRAVRVLNAAG  77

Query  66   LPKRARDTLGQVFQKSGIISSPFEERIRFIYALSEEVSETITEIDGIVSARVHIVLPEKA  125
            LP+++R +LG++F+K G+IS+P+EER R+IYALS+E+  T ++IDG++ ARVH+VLPE+ 
Sbjct  78   LPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERI  137

Query  126  DLGEEVKPSSAAIFIKHRPEFDIEFLIPQIKRLVSNAIEGVEYASV-----SVALVPARE  180
              GE V+P+SAA+FIKH + +D + +  +I+++V+++I G+   S      S+ +VPA E
Sbjct  138  APGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATE  197

Query  181  LKPVSQRTA  189
            ++  +Q+++
Sbjct  198  FQETTQWAS  206

23) nolT in NC_018000


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  123 bits (450),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 89/214 (42%), Positives = 141/214 (66%), Gaps = 19/214 (8%)

Query  26   CS--VDLYTNLDEREANEMVATLLAKGIAAGRVVQKDGKLTVTVDEDQFSQAVTVLNMAG  83
            CS   DL+T L E+++NE+VA L  + I A + ++K G + VTV   + ++AV VLN AG
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTG-VVVTVATSDMNRAVRVLNAAG  77

Query  84   LPKEKFATLGTVFRQEGLVASPVQERAQMIYALSEELSRTVSEIDGVLSARVHVVLPDND  143
            LP++  A+LG +F++EG++++P++ERA+ IYALS+EL  T S+IDGV+ ARVHVVLP+  
Sbjct  78   LPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERI  137

Query  144  PLQRNAIPASASVFIRHEAELDVNPLIPRIKTLVANSISGLTYE-----KVSVVPVASQR  198
            +      PASA+VFI+H A LD +++  RI+ +VA+SI+G++ +     K S+V V++  
Sbjct  138  APGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATE  197

Query  199  TSEPVAAAELTSF-----------LGIWMLPASV  221
              E    A + +F           L +W++PA+V
Sbjct  198  FQETTQWASFGPFKLDSEELPFWHLMLWLVPAGV  231

24) G655_16560 in NC_020912


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  117 bits (428),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 137/201 (69%), Gaps = 10/201 (4%)

Query  19   CK--VELYTGISQKEGNEMLALLRSEGVSADKQADKDGTVRLLVEESDIAEAVEVLKRKG  76
            C    +L+TG+S++++NE++A L  + + A K+ +K G V + V  SD+  AV VL+  G
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSDMNRAVRVLNAAG  77

Query  77   YPRENFSTLKDVFPKDGLISSPIEERARLNYAKAQEISHTLSEIDGVLVARVHVVLPEER  136
             PR++ ++L D+F K+G+IS+P+EERAR  YA +QE+  T S+IDGV+VARVHVVLP ER
Sbjct  78   LPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLP-ER  136

Query  137  DGLGRKSSPASASVFIKHAADVQLDAYVPQIKQLVNNGIEGLSYD-----RISVVLVPSA  191
             + G    PASA+VFIKH+A ++ D+   +I+Q+V ++I G+S +     ++S+V+VP++
Sbjct  137  IAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPAT  196

Query  192  GVRQVPLAPRFESVFSIQVAE  212
              ++    + F + F ++  E
Sbjct  197  EFQETTQWASFGP-FKLDSEE  216

25) PADK2_17080 in NC_018080


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  117 bits (428),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 137/201 (69%), Gaps = 10/201 (4%)

Query  19   CK--VELYTGISQKEGNEMLALLRSEGVSADKQADKDGTVRLLVEESDIAEAVEVLKRKG  76
            C    +L+TG+S++++NE++A L  + + A K+ +K G V + V  SD+  AV VL+  G
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSDMNRAVRVLNAAG  77

Query  77   YPRENFSTLKDVFPKDGLISSPIEERARLNYAKAQEISHTLSEIDGVLVARVHVVLPEER  136
             PR++ ++L D+F K+G+IS+P+EERAR  YA +QE+  T S+IDGV+VARVHVVLP ER
Sbjct  78   LPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLP-ER  136

Query  137  DGLGRKSSPASASVFIKHAADVQLDAYVPQIKQLVNNGIEGLSYD-----RISVVLVPSA  191
             + G    PASA+VFIKH+A ++ D+   +I+Q+V ++I G+S +     ++S+V+VP++
Sbjct  137  IAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPAT  196

Query  192  GVRQVPLAPRFESVFSIQVAE  212
              ++    + F + F ++  E
Sbjct  197  EFQETTQWASFGP-FKLDSEE  216

26) pscJ in NC_011770


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  117 bits (428),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 137/201 (69%), Gaps = 10/201 (4%)

Query  23   CK--VELYTGISQKEGNEMLALLRSEGVSADKQADKDGTVRLLVEESDIAEAVEVLKRKG  80
            C    +L+TG+S++++NE++A L  + + A K+ +K G V + V  SD+  AV VL+  G
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSDMNRAVRVLNAAG  77

Query  81   YPRENFSTLKDVFPKDGLISSPIEERARLNYAKAQEISHTLSEIDGVLVARVHVVLPEER  140
             PR++ ++L D+F K+G+IS+P+EERAR  YA +QE+  T S+IDGV+VARVHVVLP ER
Sbjct  78   LPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLP-ER  136

Query  141  DGLGRKSSPASASVFIKHAADVQLDAYVPQIKQLVNNGIEGLSYD-----RISVVLVPSA  195
             + G    PASA+VFIKH+A ++ D+   +I+Q+V ++I G+S +     ++S+V+VP++
Sbjct  137  IAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPAT  196

Query  196  GVRQVPLAPRFESVFSIQVAE  216
              ++    + F + F ++  E
Sbjct  197  EFQETTQWASFGP-FKLDSEE  216

27) pscJ in NC_017548


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  117 bits (428),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 137/201 (69%), Gaps = 10/201 (4%)

Query  19   CK--VELYTGISQKEGNEMLALLRSEGVSADKQADKDGTVRLLVEESDIAEAVEVLKRKG  76
            C    +L+TG+S++++NE++A L  + + A K+ +K G V + V  SD+  AV VL+  G
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSDMNRAVRVLNAAG  77

Query  77   YPRENFSTLKDVFPKDGLISSPIEERARLNYAKAQEISHTLSEIDGVLVARVHVVLPEER  136
             PR++ ++L D+F K+G+IS+P+EERAR  YA +QE+  T S+IDGV+VARVHVVLP ER
Sbjct  78   LPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLP-ER  136

Query  137  DGLGRKSSPASASVFIKHAADVQLDAYVPQIKQLVNNGIEGLSYD-----RISVVLVPSA  191
             + G    PASA+VFIKH+A ++ D+   +I+Q+V ++I G+S +     ++S+V+VP++
Sbjct  137  IAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPAT  196

Query  192  GVRQVPLAPRFESVFSIQVAE  212
              ++    + F + F ++  E
Sbjct  197  EFQETTQWASFGP-FKLDSEE  216

28) pscJ in NC_017549


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  117 bits (428),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 137/201 (69%), Gaps = 10/201 (4%)

Query  19   CK--VELYTGISQKEGNEMLALLRSEGVSADKQADKDGTVRLLVEESDIAEAVEVLKRKG  76
            C    +L+TG+S++++NE++A L  + + A K+ +K G V + V  SD+  AV VL+  G
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSDMNRAVRVLNAAG  77

Query  77   YPRENFSTLKDVFPKDGLISSPIEERARLNYAKAQEISHTLSEIDGVLVARVHVVLPEER  136
             PR++ ++L D+F K+G+IS+P+EERAR  YA +QE+  T S+IDGV+VARVHVVLP ER
Sbjct  78   LPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLP-ER  136

Query  137  DGLGRKSSPASASVFIKHAADVQLDAYVPQIKQLVNNGIEGLSYD-----RISVVLVPSA  191
             + G    PASA+VFIKH+A ++ D+   +I+Q+V ++I G+S +     ++S+V+VP++
Sbjct  137  IAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPAT  196

Query  192  GVRQVPLAPRFESVFSIQVAE  212
              ++    + F + F ++  E
Sbjct  197  EFQETTQWASFGP-FKLDSEE  216

29) pscJ in NC_002516


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  117 bits (428),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 137/201 (69%), Gaps = 10/201 (4%)

Query  23   CK--VELYTGISQKEGNEMLALLRSEGVSADKQADKDGTVRLLVEESDIAEAVEVLKRKG  80
            C    +L+TG+S++++NE++A L  + + A K+ +K G V + V  SD+  AV VL+  G
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSDMNRAVRVLNAAG  77

Query  81   YPRENFSTLKDVFPKDGLISSPIEERARLNYAKAQEISHTLSEIDGVLVARVHVVLPEER  140
             PR++ ++L D+F K+G+IS+P+EERAR  YA +QE+  T S+IDGV+VARVHVVLP ER
Sbjct  78   LPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLP-ER  136

Query  141  DGLGRKSSPASASVFIKHAADVQLDAYVPQIKQLVNNGIEGLSYD-----RISVVLVPSA  195
             + G    PASA+VFIKH+A ++ D+   +I+Q+V ++I G+S +     ++S+V+VP++
Sbjct  137  IAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPAT  196

Query  196  GVRQVPLAPRFESVFSIQVAE  216
              ++    + F + F ++  E
Sbjct  197  EFQETTQWASFGP-FKLDSEE  216

30) pscJ in NC_008463


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  117 bits (428),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 83/201 (42%), Positives = 137/201 (69%), Gaps = 10/201 (4%)

Query  23   CK--VELYTGISQKEGNEMLALLRSEGVSADKQADKDGTVRLLVEESDIAEAVEVLKRKG  80
            C    +L+TG+S++++NE++A L  + + A K+ +K G V + V  SD+  AV VL+  G
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSDMNRAVRVLNAAG  77

Query  81   YPRENFSTLKDVFPKDGLISSPIEERARLNYAKAQEISHTLSEIDGVLVARVHVVLPEER  140
             PR++ ++L D+F K+G+IS+P+EERAR  YA +QE+  T S+IDGV+VARVHVVLP ER
Sbjct  78   LPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLP-ER  136

Query  141  DGLGRKSSPASASVFIKHAADVQLDAYVPQIKQLVNNGIEGLSYD-----RISVVLVPSA  195
             + G    PASA+VFIKH+A ++ D+   +I+Q+V ++I G+S +     ++S+V+VP++
Sbjct  137  IAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPAT  196

Query  196  GVRQVPLAPRFESVFSIQVAE  216
              ++    + F + F ++  E
Sbjct  197  EFQETTQWASFGP-FKLDSEE  216

31) M892_04620 in NC_022269


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  116 bits (425),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 81/194 (42%), Positives = 133/194 (69%), Gaps = 9/194 (4%)

Query  15   C--QTELYTGVSQKEGNEMLSILLSEGVVATKEPDKDNTVKLMVDNAQIAFAVDALKRKG  72
            C  +T+L+TG+S++++NE+++ L  + + A K  +K   V + V  +++  AV  L+  G
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSDMNRAVRVLNAAG  77

Query  73   YPREQFSTLKEVFPKDDLISSPLAERARLIYAKSQELSSTLSQIDGVLVARVHVVLEDQN  132
             PR+  ++L ++F K+++IS+PL ERAR IYA SQEL +T SQIDGV+VARVHVVL ++ 
Sbjct  78   LPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPER-  136

Query  133  LRPGERPTPASASVFIKHAADVALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSS  187
            + PGE   PASA+VFIKH+A +  DS   +I+ +V +SI G++ +     ++S+V VP++
Sbjct  137  IAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPAT  196

Query  188  EVRVTSQGNQFESI  201
            E + T+Q   F ++
Sbjct  197  EFQETTQWASFGPF  210

32) VIBHAR_01707 in NC_009783


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  116 bits (425),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 81/194 (42%), Positives = 133/194 (69%), Gaps = 9/194 (4%)

Query  24   C--QTELYTGVSQKEGNEMLSILLSEGVVATKEPDKDNTVKLMVDNAQIAFAVDALKRKG  81
            C  +T+L+TG+S++++NE+++ L  + + A K  +K   V + V  +++  AV  L+  G
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSDMNRAVRVLNAAG  77

Query  82   YPREQFSTLKEVFPKDDLISSPLAERARLIYAKSQELSSTLSQIDGVLVARVHVVLEDQN  141
             PR+  ++L ++F K+++IS+PL ERAR IYA SQEL +T SQIDGV+VARVHVVL ++ 
Sbjct  78   LPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPER-  136

Query  142  LRPGERPTPASASVFIKHAADVALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSS  196
            + PGE   PASA+VFIKH+A +  DS   +I+ +V +SI G++ +     ++S+V VP++
Sbjct  137  IAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPAT  196

Query  197  EVRVTSQGNQFESI  210
            E + T+Q   F ++
Sbjct  197  EFQETTQWASFGPF  210

33) VPBB_1548 in NC_019955


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  116 bits (423),  Expect = 9e-28, Method: Compositional matrix adjust.
 Identities = 81/191 (43%), Positives = 131/191 (69%), Gaps = 9/191 (4%)

Query  20   C--QTELYTNVSQKEGNEMLSILLSEGVVATKEPDKDNKVKLMVDSSQIAFAVDALKRKG  77
            C  +T+L+T +S++++NE+++ L  + + A K  +K   V + V +S++  AV  L+  G
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSDMNRAVRVLNAAG  77

Query  78   YPREQFSTLKEVFPKDDLISSPLAERARLVYAKSQELSSTLSQIDGVLVARVHVVLEDQD  137
             PR+  ++L ++F K+++IS+PL ERAR +YA SQEL +T SQIDGV+VARVHVVL ++ 
Sbjct  78   LPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPER-  136

Query  138  LRPGERPTPASASVFIKHAADVALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSS  192
            + PGE   PASA+VFIKH+A +  DS   +I+ +V +SI G++ +     ++S+V VP++
Sbjct  137  IAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPAT  196

Query  193  EVRVTTQSNQF  203
            E + TTQ   F
Sbjct  197  EFQETTQWASF  207

34) N646_0755 in NC_022349


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  116 bits (423),  Expect = 9e-28, Method: Compositional matrix adjust.
 Identities = 79/191 (42%), Positives = 131/191 (69%), Gaps = 9/191 (4%)

Query  19   C--QTELYTNVTQKEGNEMLSILLSEGVVATKEPDKDNTVKLMVDSSQIAFAVDALKRKG  76
            C  +T+L+T ++++++NE+++ L  + + A K  +K   V + V +S++  AV  L+  G
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSDMNRAVRVLNAAG  77

Query  77   YPREQFSTLKEVFPKDDLISSPLAERARLVYAKSQELSSTLSQIDGVLVARVHVVLEDQD  136
             PR+  ++L ++F K+++IS+PL ERAR +YA SQEL +T SQIDGV+VARVHVVL ++ 
Sbjct  78   LPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPER-  136

Query  137  LRPGERPTPASASVFIKHAADIALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSS  191
            + PGE   PASA+VFIKH+A +  DS   +I+ +V +SI G++ +     ++S+V VP++
Sbjct  137  IAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPAT  196

Query  192  EVRVATQNNQF  202
            E + +TQ   F
Sbjct  197  EFQETTQWASF  207

35) VEA_003344 in NC_013456


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  116 bits (423),  Expect = 9e-28, Method: Compositional matrix adjust.
 Identities = 79/191 (42%), Positives = 131/191 (69%), Gaps = 9/191 (4%)

Query  19   C--QTELYTNVTQKEGNEMLSILLSEGVVATKEPDKDNTVKLMVDSSQIAFAVDALKRKG  76
            C  +T+L+T ++++++NE+++ L  + + A K  +K   V + V +S++  AV  L+  G
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSDMNRAVRVLNAAG  77

Query  77   YPREQFSTLKEVFPKDDLISSPLAERARLVYAKSQELSSTLSQIDGVLVARVHVVLEDQD  136
             PR+  ++L ++F K+++IS+PL ERAR +YA SQEL +T SQIDGV+VARVHVVL ++ 
Sbjct  78   LPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPER-  136

Query  137  LRPGERPTPASASVFIKHAADIALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSS  191
            + PGE   PASA+VFIKH+A +  DS   +I+ +V +SI G++ +     ++S+V VP++
Sbjct  137  IAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPAT  196

Query  192  EVRIATQNNQF  202
            E + +TQ   F
Sbjct  197  EFQETTQWASF  207

36) VP1690 in NC_004603


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  115 bits (421),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 131/191 (69%), Gaps = 9/191 (4%)

Query  20   C--QTELYTNVSQKEGNEMLSILLSEGVVATKEPDKDNKVKLMVDSSQIAFAVDALKRKG  77
            C  +T+L+T +S++++NE+++ L  + + A K  +K   V + V +S++  AV  L+  G
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSDMNRAVRVLNAAG  77

Query  78   YPREQFSTLKEVFPKDDLISSPLAERARLVYAKSQELSSTLSQIDGVLVARVHVVLEDQD  137
             PR+  ++L ++F K+++IS+PL ERAR +YA SQEL +T SQIDGV+VARVHVVL ++ 
Sbjct  78   LPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPER-  136

Query  138  LRPGERPTPASASVFIKHAADVALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSS  192
            + PGE   PASA+VFIKH+A +  DS   +I+ +V +SI G++ +     ++S+V VP++
Sbjct  137  IAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPAT  196

Query  193  EVRVATQSNQF  203
            E + +TQ   F
Sbjct  197  EFQETTQWASF  207

37) sctJ in NC_012962


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  115 bits (418),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 81/201 (41%), Positives = 137/201 (69%), Gaps = 10/201 (4%)

Query  19   CK--IELYTGVSQKEGNEMLALLREAGISSDKQPDKDGNIKLLVEESDVAQAVEVLKSKG  76
            C    +L+TG+S++++NE++A L +  I + K+ +K G + + V  SD+ +AV VL++ G
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSDMNRAVRVLNAAG  77

Query  77   YPRENFSSLQDVFPKDGLISSPVEERARLNFAKAQEIARTLSEIDGVLVARVHVVLPEEQ  136
             PR++ +SL D+F K+G+IS+P+EERAR  +A +QE+  T S+IDGV+VARVHVVLPE  
Sbjct  78   LPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERI  137

Query  137  DRLGKKLLPASSSVFIKHAADVQLDTYIPQIKQLVNNSIEGLSYD-----RISVVLVPAA  191
               G  + PAS++VFIKH+A ++ D+   +I+Q+V +SI G+S +     ++S+V+VPA+
Sbjct  138  AP-GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPAT  196

Query  192  GVRQVPLAPRYTTLFSIQVTE  212
              ++    + +   F ++  E
Sbjct  197  EFQETTQWASFGP-FKLDSEE  216

38) sctJ in NC_005126


> AF069651|1|G1|3603315|AAC35801.1|Pseudomonas_syringae_Race_4|+|27..833|hrcJ|-|putative 
hrp type III secretion pathway protein
Length=268

 Score =  113 bits (411),  Expect = 8e-27, Method: Compositional matrix adjust.
 Identities = 78/194 (41%), Positives = 134/194 (70%), Gaps = 9/194 (4%)

Query  19   CK--IELYTDVSQKEGNEMLALLREAGISSDKQPDKDGNIKLLVEESDVAQAVEVLKRKG  76
            C    +L+T++S++++NE++A L +  I + K+ +K G + + V  SD+ +AV VL+  G
Sbjct  19   CSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVV-VTVATSDMNRAVRVLNAAG  77

Query  77   YPRENFSSLQDVFPKDGLISSPIEERARLNFAKAQEIARTLSEIDGVLVARVHVVLPEEQ  136
             PR++ +SL D+F K+G+IS+P+EERAR  +A +QE+  T S+IDGV+VARVHVVLPE  
Sbjct  78   LPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATWSQIDGVIVARVHVVLPERI  137

Query  137  DRLGKKLSPASSSVFIKHAADVQLDTYIPQIKQLVNNSIEGLSYD-----RISVVLVPAA  191
               G  + PAS++VFIKH+A ++ D+   +I+Q+V +SI G+S +     ++S+V+VPA+
Sbjct  138  AP-GEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPAT  196

Query  192  GVRQVPLAPRYSTL  205
              ++    + ++ +
Sbjct  197  EFQETTQWASFGPF  210