Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
type III transcriptional regulator HrpR |
NC_005773 (Pseudomonas syringae 1448A) |
5e-139 |
98 |
|
type III transcriptional regulator HrpR |
NC_004578 (Pseudomonas syringae DC3000) |
2e-130 |
90 |
|
type III transcriptional regulator HrpR |
NC_007005 (Pseudomonas syringae B728a) |
1e-126 |
89 |
|
sigma-54 dependent trancsriptional regulator |
NC_009439 (Pseudomonas mendocina ymp) |
3e-89 |
64 |
|
sigma-54 dependent trancsriptional regulator |
NC_009439 (Pseudomonas mendocina ymp) |
3e-81 |
60 |
|
type III transcriptional regulator HrpS |
NC_004578 (Pseudomonas syringae DC3000) |
2e-80 |
64 |
|
type III transcriptional regulator HrpS |
NC_007005 (Pseudomonas syringae B728a) |
2e-79 |
64 |
|
HrpS type III protein secretion system regulatory protein |
NC_014500 (Dickeya dadantii 3937) |
4e-77 |
56 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_013592 (Dickeya dadantii Ech586) |
1e-76 |
56 |
|
type III secretion system transcriptional regulator RspS |
NC_017911 (Pseudomonas fluorescens A506) |
9e-77 |
59 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_012912 (Dickeya zeae Ech1591) |
3e-76 |
55 |
|
HrpS |
NC_018525 (Pectobacterium carotovorum PCC21) |
7e-75 |
57 |
|
type III transcriptional regulator HrpS |
NC_005773 (Pseudomonas syringae 1448A) |
6e-74 |
63 |
|
sigma-54-dependent enhancer-binding protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
9e-74 |
56 |
|
Fis family sigma-54 specific transcriptional regulator |
NC_012917 (Pectobacterium carotovorum PC1) |
2e-73 |
57 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_022268 (Serratia sp. ATCC 39006) |
3e-72 |
56 |
|
putative type III secretion system, regulatory protein |
NC_012660 (Pseudomonas fluorescens SBW25) |
9e-72 |
56 |
|
Fis family transcriptional regulator |
NC_015379 (Pseudomonas brassicacearum NFM421) |
2e-71 |
56 |
|
protein HrpS |
NC_016830 (Pseudomonas fluorescens F113) |
2e-71 |
56 |
|
Sigma-54-dependent enhancer-binding protein HrpS |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
2e-69 |
54 |
|
Hrp/hrc secretion/translocation pathway protein HrpS |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
2e-69 |
54 |
|
hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrpS protein |
NC_017445 (Erwinia sp. Ejp617) |
5e-69 |
54 |
|
Sigma-54-dependent enhancer-binding protein HrpS (hrp cluster) |
NC_010694 (Erwinia tasmaniensis Et1/99) |
1e-68 |
55 |
|
sigma-54-dependent enhancer-binding protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
8e-67 |
54 |
|
sigma-54-dependent enhancer-binding protein HrpS |
NC_013961 (Erwinia amylovora CFBP1430) |
8e-67 |
54 |
|
sigma-54 interacting regulator |
NC_020064 (Serratia marcescens FGI94) |
2e-64 |
56 |
|
type III secretion system transcriptional regulator RspS |
NC_020209 (Pseudomonas poae RE*1-1-14) |
2e-61 |
58 |
|
sigma-54 factor, interaction region |
NC_007954 (Shewanella denitrificans OS217) |
2e-45 |
41 |
|
sigma-54 dependent trancsriptional regulator |
NC_009831 (Shewanella sediminis HAW-EB3) |
4e-45 |
43 |
|
acetoacetate metabolism regulatory protein atoc |
NC_012962 (Photorhabdus asymbiotica ATCC 43949) |
2e-42 |
41 |
|
sigma-54 dependent trancsriptional regulator |
NC_009438 (Shewanella putrefaciens CN-32) |
4e-42 |
42 |
|
sigma-54 dependent trancsriptional regulator |
NC_008750 (Shewanella sp. W3-18-1) |
4e-42 |
42 |
|
Fis family sigma-54 specific transcriptional regulator |
NC_017571 (Shewanella baltica BA175) |
1e-40 |
42 |
|
Fis family sigma-54 specific transcriptional regulator |
NC_017579 (Shewanella baltica OS117) |
1e-40 |
42 |
|
sigma-54 dependent trancsriptional regulator |
NC_009052 (Shewanella baltica OS155) |
1e-40 |
42 |
|
Fis family transcriptional regulator |
NC_013960 (Nitrosococcus halophilus Nc 4) |
4e-39 |
44 |
|
Fis family transcriptional regulator |
NC_008340 (Alkalilimnicola ehrlichii MLHE-1) |
7e-39 |
42 |
|
Helix-turn-helix, Fis-type |
NC_011566 (Shewanella piezotolerans WP3) |
8e-38 |
42 |
|
sigma-54 dependent DNA-binding response regulator |
NC_002977 (Methylococcus capsulatus Bath) |
2e-37 |
41 |
|
Fis family transcriptional regulator |
NC_021491 (Pseudomonas putida H8234) |
1e-36 |
42 |
|
putative sigma-54 specific transcriptional regulator |
NC_010501 (Pseudomonas putida W619) |
1e-36 |
41 |
|
hypothetical protein |
NC_021505 (Pseudomonas putida NBRC 14164) |
2e-36 |
41 |
|
putative sigma-54 specific transcriptional regulator |
NC_010322 (Pseudomonas putida GB-1) |
3e-36 |
41 |
|
Sigma-54 dependent transcriptional regulator |
NC_017530 (Pseudomonas putida BIRD-1) |
4e-36 |
42 |
|
Fis family transcriptional regulator |
NC_002947 (Pseudomonas putida KT2440) |
4e-36 |
42 |
|
hypothetical protein |
NC_021658 (Sorangium cellulosum So0157-2) |
1e-33 |
41 |
|
flagellar regulatory protein fleQ |
NC_015850 (Acidithiobacillus caldus SM-1) |
3e-33 |
41 |
|
hypothetical protein |
NC_021499 (Pseudomonas resinovorans NBRC 106553) |
5e-29 |
43 |
|
response regulator receiver protein |
NC_018649 (Leptospirillum ferriphilum ML-04) |
9e-29 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AF069650' AND ph.id_pai_orf='1' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc