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PAthogenisity Island DataBase (PAI DB)

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Homologs of unnamed gene of AF041810

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) NT01EI_2533
( YP_002933937.1 )

hypothetical protein

NC_012779
(Edwardsiella ictaluri 93-146)

4e-53

2) NT01EI_1977
( YP_002933388.1 )

hypothetical protein

NC_012779
(Edwardsiella ictaluri 93-146)

7e-53

3) NT01EI_3687
( YP_002935050.1 )

hypothetical protein

NC_012779
(Edwardsiella ictaluri 93-146)

1e-49

4) G2583_3640
( YP_003501117.1 )

transposase

NC_013941
(Escherichia coli CB9615)

5e-44

5) NT01EI_1121
( YP_002932567.1 )

hypothetical protein

NC_012779
(Edwardsiella ictaluri 93-146)

4e-39

6) MYSTI_04899
( YP_007361872.1 )

IS630 family transposase

NC_020126
(Myxococcus stipitatus DSM 14675)

5e-24

7) COCOR_04800
( YP_005370764.1 )

insertion element IS630 protein

NC_017030
(Corallococcus coralloides DSM 2259)

6e-23

8) MYSTI_06614
( YP_007363571.1 )

IS630 family transposase

NC_020126
(Myxococcus stipitatus DSM 14675)

4e-18

• Sequence Alignments

1) NT01EI_2533 in NC_012779


> AF041810|1|G1|3015631|AAC28570.1|Escherichia_coli_172|+|1..405|-|-|unknown 
protein
Length=134

 Score =  200 bits (743),  Expect = 4e-53, Method: Compositional matrix adjust.
 Identities = 118/134 (89%), Positives = 124/134 (93%), Gaps = 0/134 (0%)

Query  24   DIHLNPKIGADWQLRGQQKRVVTPGQNEKYSLAGALHCGTGKVSYVGGNRKSSLLFIKLL  83
            DIH NPKIGA+WQLRGQQK+VVTPGQNEKY LAGALH GTGKVSYVGGN KSS LFI LL
Sbjct  1    DIHPNPKIGAGWQLRGQQKHVVTPGQNEKYYLAGALHSGTGKVSYVGGNSKSSTLFISLL  60

Query  84   KQLKAMYRRAKTITLIVDNYIIHKSRETQRWLKQNPKFRVIYPPVYSPWVNHVERLWQAL  143
            K+LK+ YRR+KTI LIVDNYIIHKSRETQRWLKQNPKFRVIY  VYSPWVNHVERLWQAL
Sbjct  61   KHLKSTYRRSKTIMLIVDNYIIHKSRETQRWLKQNPKFRVIYQLVYSPWVNHVERLWQAL  120

Query  144  HDTITRNHQCRSMW  157
            HDTIT+NHQCRSMW
Sbjct  121  HDTITHNHQCRSMW  134

2) NT01EI_1977 in NC_012779


> AF041810|1|G1|3015631|AAC28570.1|Escherichia_coli_172|+|1..405|-|-|unknown 
protein
Length=134

 Score =  199 bits (740),  Expect = 7e-53, Method: Compositional matrix adjust.
 Identities = 117/134 (88%), Positives = 125/134 (94%), Gaps = 0/134 (0%)

Query  24   DIHLNPKIGADWQLRGQQKRVVTPGQNEKYSLAGALHCGAGKVSYVGGNSKSSVLFIKLL  83
            DIH NPKIGA+WQLRGQQK+VVTPGQNEKY LAGALH G+GKVSYVGGNSKSS LFI LL
Sbjct  1    DIHPNPKIGAGWQLRGQQKHVVTPGQNEKYYLAGALHSGTGKVSYVGGNSKSSTLFISLL  60

Query  84   KQLKATYRRAKTITLIVDNDIIHKSRETQRWLKQNPKFRVIYPPVYSPWVNHVDRLWQAL  143
            K+LK+TYRR+KTI LIVDN IIHKSRETQRWLKQNPKFRVIY  VYSPWVNHV+RLWQAL
Sbjct  61   KHLKSTYRRSKTIMLIVDNYIIHKSRETQRWLKQNPKFRVIYQLVYSPWVNHVERLWQAL  120

Query  144  HDTITRNHQCRSMW  157
            HDTIT+NHQCRSMW
Sbjct  121  HDTITHNHQCRSMW  134

3) NT01EI_3687 in NC_012779


> AF041810|1|G1|3015631|AAC28570.1|Escherichia_coli_172|+|1..405|-|-|unknown 
protein
Length=134

 Score =  188 bits (698),  Expect = 1e-49, Method: Compositional matrix adjust.
 Identities = 108/134 (81%), Positives = 123/134 (92%), Gaps = 0/134 (0%)

Query  24   DIHLNPKIGADWQLRGQQKRIVTPGQDEKYSLAGALHSGTGKVSYVSGNSKYSSLFIKQL  83
            DIH NPKIGA+WQLRGQQK++VTPGQ+EKY LAGALHSGTGKVSYV+GNSK S+LFI  L
Sbjct  1    DIHPNPKIGAGWQLRGQQKHVVTPGQNEKYYLAGALHSGTGKVSYVGGNSKSSTLFISLL  60

Query  84   KNLKATCRRAKTIMLIVDNYIIHKSCETLRWLKANPTFKVIYQPIYSPWVNHIEQLWQAL  143
            K+LK+T RR+KTIMLIVDNYIIHKS ET RWLK NP F+VIYQ +YSPWVNH+E+LWQAL
Sbjct  61   KHLKSTYRRSKTIMLIVDNYIIHKSRETQRWLKQNPKFRVIYQLVYSPWVNHVERLWQAL  120

Query  144  HETITRNHQCRSMW  157
            H+TIT+NHQCRSMW
Sbjct  121  HDTITHNHQCRSMW  134

4) G2583_3640 in NC_013941


> AF041810|1|G1|3015631|AAC28570.1|Escherichia_coli_172|+|1..405|-|-|unknown 
protein
Length=134

 Score =  170 bits (628),  Expect = 5e-44, Method: Compositional matrix adjust.
 Identities = 102/112 (92%), Positives = 105/112 (94%), Gaps = 0/112 (0%)

Query  43   NPKTGADWQLRRQQKHVVTPGQNEKYYLAGALHSGTGKVSYVGGNSKSSALFISLLKHLK  102
            NPK GA+WQLR QQKHVVTPGQNEKYYLAGALHSGTGKVSYVGGNSKSS+LFISLLKHLK
Sbjct  5    NPKIGAGWQLRGQQKHVVTPGQNEKYYLAGALHSGTGKVSYVGGNSKSSTLFISLLKHLK  64

Query  103  LTYRRDKPITLIVDNYIIHKSRETQRWLKENPKFRVIYQPVYSPWVNHVERL  154
             TYRR K I LIVDNYIIHKSRETQRWLK+NPKFRVIYQ VYSPWVNHVERL
Sbjct  65   STYRRSKTIMLIVDNYIIHKSRETQRWLKQNPKFRVIYQLVYSPWVNHVERL  116

5) NT01EI_1121 in NC_012779


> AF041810|1|G1|3015631|AAC28570.1|Escherichia_coli_172|+|1..405|-|-|unknown 
protein
Length=134

 Score =  154 bits (567),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 90/114 (79%), Positives = 102/114 (90%), Gaps = 0/114 (0%)

Query  1    MVTPGQNEKYSLAEALHCGTGKVSYMGGNGKILSLFISILNYIKAMFWRAETITLIVDND  60
            +VTPGQNEKY LA ALH GTGKVSY+GGN+K  +LFIS+L+ +K+ ++R+ TI LIVDN 
Sbjct  21   VVTPGQNEKYYLAGALHSGTGKVSYVGGNSKSSTLFISLLKHLKSTYRRSKTIMLIVDNY  80

Query  61   IIHKSRETQRWLKQNPKFRVIYPPVYSPWVNHVERLWQALHDTITRNHQCRSMW  114
            IIHKSRETQRWLKQNPKFRVIY  VYSPWVNHVERLWQALHDTIT+NHQCRSMW
Sbjct  81   IIHKSRETQRWLKQNPKFRVIYQLVYSPWVNHVERLWQALHDTITHNHQCRSMW  134

6) MYSTI_04899 in NC_020126


> AF041810|1|G1|3015631|AAC28570.1|Escherichia_coli_172|+|1..405|-|-|unknown 
protein
Length=134

 Score =  103 bits (375),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 64/134 (48%), Positives = 95/134 (71%), Gaps = 1/134 (0%)

Query  5    DIHLNPKVGRDWCLPGYRRVVVTPGNNQKRYLAGALNVRTGRLTWVEGRSKASALFIQLL  64
            DIH NPK+G +W L G ++ VVTPG+N+K YLAGAL+  TG+++ V G SK+S+LFI LL
Sbjct  1    DIHPNPKIGAGWQLRGQQKHVVTPGQNEKYYLAGALHSGTGKVSYVGGNSKSSTLFISLL  60

Query  65   WRLASAYPRARRIHLVLDNAAVHSSRKTRKVLAQLGRRFVLHFLPPYCPQGNRIERVWLD  124
             +L S+Y R++ I L++DN  +H SR T++ L Q   +F + +   Y P  N++ER+W  
Sbjct  61   KHLKSTYRRSKTIMLIVDNYIIHKSRETQRWLKQ-NPKFRVIYQLVYSPWVNHVERLWQA  119

Query  125  LHANVTRNHRCRTM  138
            LH  +T+NH+CR+M
Sbjct  120  LHDTITHNHQCRSM  133

7) COCOR_04800 in NC_017030


> AF041810|1|G1|3015631|AAC28570.1|Escherichia_coli_172|+|1..405|-|-|unknown 
protein
Length=134

 Score =  100 bits (361),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 56/134 (42%), Positives = 96/134 (72%), Gaps = 1/134 (0%)

Query  2    DVHLNPKIGPDWTLPGQRREVVTPGNNQKRFVAGALDARTARVTWVQGEKKTSALFIDLV  61
            D+H NPKIG++W L GQ+++VVTPG+N+K ++AGAL++ T++V+ V G+ K+S+LFI L+
Sbjct  1    DIHPNPKIGAGWQLRGQQKHVVTPGQNEKYYLAGALHSGTGKVSYVGGNSKSSTLFISLL  60

Query  62   RAVDAAYPRAKRLHFILDNAATHSSKKTQKALEALGERLVLHFLPPYCPEGNRIERLWWD  121
            + + ++Y R+K + +I+DN   H S+ TQ+ L     ++ + +   Y P  N++ERLW  
Sbjct  61   KHLKSTYRRSKTIMLIVDNYIIHKSRETQRWLKQ-NPKFRVIYQLVYSPWVNHVERLWQA  119

Query  122  VHANVTRNHRCKKM  135
            +H  +T+NH+C+ M
Sbjct  120  LHDTITHNHQCRSM  133

8) MYSTI_06614 in NC_020126


> AF041810|1|G1|3015631|AAC28570.1|Escherichia_coli_172|+|1..405|-|-|unknown 
protein
Length=134

 Score = 84.2 bits (300),  Expect = 4e-18, Method: Compositional matrix adjust.
 Identities = 52/114 (46%), Positives = 81/114 (72%), Gaps = 1/114 (0%)

Query  2    VVTPGNNQNRYLAGALNVRTGKLTWIEGRSKASALFIQLLWRLASAYRWARRIHLVLDNA  61
            VVTPG+N++ YLAGAL+  TGK++ + G SK+S+LFI LL +L S+YR+++ I L++DN 
Sbjct  21   VVTPGQNEKYYLAGALHSGTGKVSYVGGNSKSSTLFISLLKHLKSTYRRSKTIMLIVDNY  80

Query  62   SVHSSKKTLTALAQLHGRFVLHFLPPYCPQGNRIERVWLDLHANVTRNHRCRTM  115
             +H S+ T   L Q + +F + +   Y P  N++ER+W  LH  +T+NH+CR+M
Sbjct  81   IIHKSRETQRWLKQ-NPKFRVIYQLVYSPWVNHVERLWQALHDTITHNHQCRSM  133