>AB190946|1|G1|52693806|BAD51756.1|Helicobacter_pylori_OK160|+|1..3552|cagA|-|cytotoxin
Length = 3552
Score = 1403 bits (3620), Expect = 0.0
Identities = 760/837 (91%)
Strand = Plus / Plus
Query: 1034 tacaagttcaaccagttaccgattcacaataacgctctgtcttctatgctaatggggagt 1093
|||||||||||||| ||| ||||||||||||||||||||||||| || |||||||||||
Sbjct: 868 tacaagttcaaccaattattgattcacaataacgctctgtcttctgtgttaatggggagt 927
Query: 1094 catagcagcatagaacctgaaaaagtttcattgttgtatggggataatggtggtcctgaa 1153
|||| ||||||||||||||||||||||||| |||||||||| |||||||| ||||||
Sbjct: 928 cataatggcatagaacctgaaaaagtttcattattgtatgggggcaatggtggccctgaa 987
Query: 1154 gctaggcatgattggaacgccaccgttggttataaaaaccaacaaggcaacaatgtggcc 1213
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 988 gctaggcatgattggaacgccaccgttggttataaaaaccaacaaggcgacaatgtggct 1047
Query: 1214 acactcatcaatgcgcatcttaaaaacggcagcgggttagtcatagcgggtaatggaaat 1273
|||||||| |||| |||| | ||||||||||| |||||||||||||| ||| || ||
Sbjct: 1048 acactcattaatgtgcatatgaaaaacggcagtgggttagtcatagcaggtggtgagaaa 1107
Query: 1274 gggattaacaaccctagcttctatctctacaaaacagaccaactcacaggcttggaacaa 1333
||| ||||||||||||| || |||||||||||| |||||| |||||||||||| |||||
Sbjct: 1108 ggggttaacaaccctagtttttatctctacaaagaagaccagctcacaggcttgaaacaa 1167
Query: 1334 gcgttgagtcaagaagagatccaaaacaaagtggatttcatggaacttcttgcacaaaac 1393
|| ||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 1168 gcattgagccaagaagagatccaaaacaaagtagatttcatggaatttcttgcacaaaac 1227
Query: 1394 aacgctagattagataacttgagcgaggaagagaaagaaaagttccaaactgagattgga 1453
|| |||| |||||||||||||||| || ||||||||||||| ||||||| |||||||| |
Sbjct: 1228 aatgctaaattagataacttgagcaagaaagagaaagaaaaattccaaaatgagattgaa 1287
Query: 1454 aatttccaaaaagaccctaaggcttatttagactccctagggaatgatcgcattgctttt 1513
|||| ||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 1288 gattttcaaaaagactctaaggcttatttagacgccctagggaatgatcacattgctttt 1347
Query: 1514 gtttctaaaaaagaccaaaagcatttagctttggttactgagtttggtaatggggaattg 1573
||||||||||||||| |||| ||||||||||| ||| |||||||||||||||||||||||
Sbjct: 1348 gtttctaaaaaagacaaaaaacatttagctttagttgctgagtttggtaatggggaattg 1407
Query: 1574 agctatactctcaaagattatgggaaaaaacaagatagagctttagatagggagacaaaa 1633
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1408 agctacactctcaaagattatgggaaaaaacaagataaagctttagatagggagacaaaa 1467
Query: 1634 accactcttcaaggtaacctaaagcatgatggcgtgatgtttgtcaattattccaatttc 1693
||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 1468 accactcttcaaggtaacctaaaacatgatggcgtgatgtttgttaattattctaatttc 1527
Query: 1694 aaatacaccaacgcctccaagagtcctgatgagggtataggcgctacgaatggcgtttcc 1753
|||||||||||||||||||||||||||||| ||||| | || ||||||||||||||||||
Sbjct: 1528 aaatacaccaacgcctccaagagtcctgataagggtgtgggtgctacgaatggcgtttcc 1587
Query: 1754 catttggaagcaaattttagcaaggtggctgtctttaatttgcctgatttaaatggtctc 1813
||||||||||||||| |||| ||||| |||||||||||||||||| |||||||| ||||
Sbjct: 1588 catttggaagcaaatcttagtaaggtagctgtctttaatttgcctaatttaaataatctc 1647
Query: 1814 gctatctctagttttgcaaggcggaatttagaggataaactgatcgctaaaggattg 1870
|||||| ||||| | |||||| | ||||| ||||||||||| ||||||||||||
Sbjct: 1648 gctatcaatagttatataaggcgagacttagaagataaactgatggctaaaggattg 1704
Score = 1181 bits (3047), Expect = 0.0
Identities = 656/728 (90%)
Strand = Plus / Plus
Query: 1873 cccaa-aagacgctaataagatcatcaaagactttttgaacagcaacaaggaattgcttg 1931
||||| |||| ||||||||| |||||||||||||||||||||||||||| |||||| |||
Sbjct: 1706 cccaacaagaagctaataagctcatcaaagactttttgaacagcaacaaagaattggttg 1765
Query: 1932 aaaaagctttagacttcaataaagctgtagctgaagctaaaaatacaggcaattatgacg 1991
||| ||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 1766 aaatagctttaaacttcaataaaactgtagctgaagctaaaaacacaggcaattatgacg 1825
Query: 1992 gagtgaaaaaagctcaaaaagatcttgaaaaatctataaggaaacgagagcgtttagagc 2051
||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 1826 aagtgaaaaaagctcagaaagatcttgaaaaatctataagaaaacgagagcatttagaga 1885
Query: 2052 aagaaataacgaaaaaatttgagaacaagagcggcaacaaaaataaaatggaagcgaaag 2111
||||| ||||||||||||| ||||||| | ||||||||||||| ||||||||| ||||
Sbjct: 1886 aagaagtaacgaaaaaattggagaacagaaatggcaacaaaaatagaatggaagcaaaag 1945
Query: 2112 ttcaagctaacagccaaaaagatgggatttttaagcttatcaatgaagaggctcataagg 2171
|||||||||||||||||||||| ||||||| ||||||| ||||||||| |||||
Sbjct: 1946 ctcaagctaacagccaaaaagataagatttttgcaattatcaacgaagaggctggtaagg 2005
Query: 2172 aagcaagaatcgccgcttacgctcagaatcttaaaggcatcaggagggaattgtttgata 2231
|||||||| | ||||| || ||||||||||||||||||||| | |||||||| |||||
Sbjct: 2006 aagcaagagcggtcgcttgcgttcagaatcttaaaggcatcagaatggaattgtctgata 2065
Query: 2232 aagttaaaaatctcaacaagaatttgaaagactttgataaatcttttgatgcgctcaaaa 2291
| || |||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2066 agcttgaaaacatcaacaagaatttgaaagactttgataaatcttttgatgaattcaaaa 2125
Query: 2292 gtggcaaaaataaggatttcagcaaggcagaagaaacgctaaaagcccttgaaagctcgg 2351
||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||
Sbjct: 2126 atggcaaaaataaggatttcagcaagacagaagaaacgctaaaagcccttaaaagcttgg 2185
Query: 2352 tgaaagatttgggtatcaatccagaatggatttcaaaagttgaaaaccttaatgcagctt 2411
||||||||| || |||| || ||||||||||||||||||||||||||||||| ||||||
Sbjct: 2186 tgaaagattcaggcatcagtctagaatggatttcaaaagttgaaaaccttaatacagctt 2245
Query: 2412 tgaatgaattcaaaaatggcaaaaataaggatttcagcaaggtaacacaagcaaaaagcg 2471
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2246 tgaatgaattcaaaaatggcaaaaataaggatttcagcaaggtaatacaagcaaaaagcg 2305
Query: 2472 accttgaaaattccattaaggatgtgctcatcaatcaagagataacggataaagttgaca 2531
||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||
Sbjct: 2306 accttgaaaattccattaaagatgtgatcatcaatcaaaagataacggataaagttgaca 2365
Query: 2532 atctcaatcaggctgtattaagggctaaagcgataggcgattttagtggggtagagcaag 2591
|||||||||| ||||||| || |||| || ||||||||||| ||||||||||||||||
Sbjct: 2366 atctcaatcaagctgtatcaatagctagggcaataggcgatttcagtggggtagagcaag 2425
Query: 2592 agctagcc 2599
|||||||
Sbjct: 2426 cgctagcc 2433
Score = 901 bits (2325), Expect = e-262
Identities = 490/537 (91%)
Strand = Plus / Plus
Query: 37 gatcaaacaccaagccaaacggcttttaatccacaacaatttatcaataatcttcaagtg 96
|||||||||||||||||||| |||||||| || || |||||||||||||||||||||||
Sbjct: 19 gatcaaacaccaagccaaacagcttttaacccgcagcaatttatcaataatcttcaagta 78
Query: 97 gcttttattaaacttgatagtgctgtcgcttcatttgatcccgatcaaaaaccaatcgtt 156
|||||| || || |||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 79 gcttttcttgaagttgataacgctgtcgcttcatttgatcctgatcaaaaaccaatcgtt 138
Query: 157 gataagaacgatagggataacaggcaagcttttaatgtaatctcgcaattaagggaagaa 216
|||||||| |||||||||||||||||||||||| | |||||||||| ||||||| |||
Sbjct: 139 gataagaatgatagggataacaggcaagcttttgagaaaatctcgcaactaagggaggaa 198
Query: 217 tacgccaataaagcgatcaaaaatcccaccaaaaagaatcagtatttttcagactttatc 276
| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 199 ttcgctaataaagcgatcaaaaatcctgccaaaaagaatcagtatttttcaaactttatc 258
Query: 277 gataaaagcaatgatttgatcaacaaaaacgatctcattgatacagattcttccacaaag 336
||| ||||||||||| ||||||||| || ||||||||||| || |||||||||||||
Sbjct: 259 agtaagagcaatgatttaatcaacaaagacagtctcattgatataggttcttccacaaag 318
Query: 337 agctttgaaaaatttggggctcagcgttaccaaatttttatgaattgggtgtcccatcaa 396
|||||| | ||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 319 agctttcagaaatttgggactcagcgttaccaaatttttatggattgggtgtcccatcaa 378
Query: 397 aaagatccgtctaaaatcaacacccaaaaaatccgagattttatggaaaatatcatacaa 456
|||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 379 aaagatccatctaaaatcaacacccaaagaatccgaagttttatggaaaatatcatacaa 438
Query: 457 ccccctatctctgatgataaagaaaaagcggagtttttgaggtctgccaaacaatctttt 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ccccctatctctgatgataaagaaaaagcggagtttttgaggtctgccaaacaatctttt 498
Query: 517 gcaggaattatcatagggaaccaaacccgatcggatgaaaaattcatgggcgttttt 573
||||||||||||||||| ||||| | || ||| ||| |||||||||||||||| |||
Sbjct: 499 gcaggaattatcataggaaaccagatccaatcagatcaaaaattcatgggcgtgttt 555
Score = 572 bits (1477), Expect = e-163
Identities = 326/360 (91%)
Strand = Plus / Plus
Query: 3016 agcgaaattggacaattacgctactaacagccacacacgcattaatagcaatgtcaaaaa 3075
||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3165 agcgaaactagacaattacgctactaacagccacacacgcattaatagcaatgtccgaaa 3224
Query: 3076 tggaacaatcaatgaaaaagcgatcggcatgctaacgcaaaaaaaccctgagtggctcaa 3135
||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 3225 tggaacaatcaatgaaaaagcgactggtatgctaacgcaaaaaaaccctgagtggctcaa 3284
Query: 3136 gcttgtgaatgataagatagttgcgcataatgtgggaagcgctcctttgtcaggttatga 3195
||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 3285 gctcgtgaatgataagatagttgcgcataatgtgggaagtgctcctttgtcagcgtatga 3344
Query: 3196 taaaattggattcaaccaaaagaatatgaaaggttattctgattcgttcaggttttccac 3255
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 3345 taaaattggattcaaccaaaagaatatgaaagattattctgattcgttcaagttttccac 3404
Query: 3256 caagttgagcaatgccgtaaaaaacattaagtctgactttaagcaacttttaaccgattg 3315
|| ||||||||||||||||||| |||||||||||| |||| |||| |||||||| | ||
Sbjct: 3405 caggttgagcaatgccgtaaaagacattaagtctggctttgtgcaatttttaacc-aatg 3463
Query: 3316 cattt-ctgcaggaacttacagcccgaagaaagc------ggaacatggagttaaaaata 3368
||||| || ||||| |||||||| || |||||| |||||||||||| |||||||
Sbjct: 3464 cattttctacaggatcttacagcttgatgaaagcaaatgtggaacatggagtcaaaaata 3523
Score = 370 bits (954), Expect = e-102
Identities = 209/241 (87%)
Strand = Plus / Plus
Query: 2766 atctcggcggatcttcccctttgaaaaggtatgctaaagttgatgatctcagtaaggtag 2825
||||||||||| ||| |||||||| |||| || |||||||||||||||||||||||||||
Sbjct: 2924 atctcggcggacctttccctttgacaaggcatactaaagttgatgatctcagtaaggtag 2983
Query: 2826 ggctttcaagggagcaagaattgaatgagaaaattggcaatctcaatcaggcagtgtcag 2885
|||||||||||||||||||||||| | ||||||||| ||||||||| |||| | ||||
Sbjct: 2984 ggctttcaagggagcaagaattgactcagaaaattgacaatctcaaccaggtgctatcag 3043
Query: 2886 aagctaaagcaggttcttttggcaacctagaacaaatgatggatggactcaaagattcta 2945
||||||||||| || | ||| ||||||||| |||||||| || |||||||||||||
Sbjct: 3044 aagctaaagcatgtcatcttgacaacctagagcaaatgatagacaagctcaaagattcta 3103
Query: 2946 caaaaaagaatgttgtgaatctatggtttgaaggtgcaagaaaagtgcctattagtttgc 3005
|||||||||||||| ||||||||| ||||| |||||| ||||||||||| |||||||
Sbjct: 3104 caaaaaagaatgttatgaatctatatgttgaaagtgcaaaaaaagtgcctactagtttgt 3163
Query: 3006 c 3006
|
Sbjct: 3164 c 3164
Score = 351 bits (906), Expect = 6e-97
Identities = 202/227 (89%)
Strand = Plus / Plus
Query: 810 agcct---gttggggattggcttgatatttttttatcgtttgtatttaacaaagaacaat 866
||||| | ||||||||||||||||||||||||||| ||||| ||||||||| ||||||
Sbjct: 611 agcctactggtggggattggcttgatatttttttatcatttgtgtttaacaaaaaacaat 670
Query: 867 cttctgatctcaaagaaacgctcaatcaagagccaaggcctcatgttgaacaaaatgtag 926
|||| |||||||||||||||||| ||||||| ||| ||||||| ||| | || |||
Sbjct: 671 cttccgatctcaaagaaacgctcgatcaagaaccagtttctcatgtccaaccagatatag 730
Query: 927 cctctacccccacccacatacaaggcttaccgcctgaagctagggatttgcttgatgaaa 986
|| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 731 ccactaccaccaccgacatacaaggcttaccgcctgaatctagggatttgcttgatgaaa 790
Query: 987 ggggtgatttttctaaattcactcttggtgatatggaaatgttggat 1033
||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 791 ggggtaatttttctaaattcactcttggtgatatggaaatgttagat 837
Score = 122 bits (314), Expect = 6e-28
Identities = 69/77 (90%)
Strand = Plus / Plus
Query: 2689 ccctttgaaaaggtatgctaaagttgatgatctcagtaaggtagggcaatcagatagccc 2748
||||||||||||| || |||||||||||||||||||||||||||||| |||| || |
Sbjct: 2838 ccctttgaaaaggcatactaaagttgatgatctcagtaaggtagggctttcagctaatca 2897
Query: 2749 tgaacccatttacgcta 2765
|||||||||||||||||
Sbjct: 2898 tgaacccatttacgcta 2914
Score = 72 bits (185), Expect = 8e-13
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 767 gatgaatctttgaaagagaggcaagaagcacaaaacaatggag 809
||||||||||||||||| |||||||||||| |||| |||||||
Sbjct: 556 gatgaatctttgaaagaaaggcaagaagcagaaaaaaatggag 598
Score = 36 bits (93), Expect = 5e-02
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 3381 gtggtttccagaaatcttaa 3400
|||||||||| |||||||||
Sbjct: 3533 gtggtttccaaaaatcttaa 3552
Score = 25 bits (63), Expect = 1e+02
Identities = 13/14 (93%)
Strand = Plus / Plus
Query: 1 atggctaacgaaac 14
||| ||||||||||
Sbjct: 1 atgactaacgaaac 14
Score = 15 bits (40), Expect = 7e+04
Identities = 8/8 (100%)
Strand = Plus / Plus
Query: 2603 ctcaaaag 2610
||||||||
Sbjct: 2448 ctcaaaag 2455 |