>AB190945|1|G1|52693804|BAD51755.1|Helicobacter_pylori_OK159|+|1..3519|cagA|-|cytotoxin
Length = 3519
Score = 2476 bits (6390), Expect = 0.0
Identities = 1371/1494 (92%)
Strand = Plus / Plus
Query: 1058 cacaataacgctctgtcttctatgctaatggggagtcatagcagcatagaacctgaaaaa 1117
|||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 886 cacaataacgctttatcttctgtgctaatggggagtcatagcagcatagaacctgaaaaa 945
Query: 1118 gtttcattgttgtatggggataatggtggtcctgaagctaggcatgattggaacgccacc 1177
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 946 gtttcattattgtatggggataatggtggtcctgaagctaggcatgattggaacgctact 1005
Query: 1178 gttggttataaaaaccaacaaggcaacaatgtggccacactcatcaatgcgcatcttaaa 1237
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1006 gttggttataaaaaccaacaaggcaacaatgtggccacactcattaatgcgcatcttaat 1065
Query: 1238 aacggcagcgggttagtcatagcgggtaatggaaatgggattaacaaccctagcttctat 1297
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 1066 aacggcagcgggttagtcatagcgggtaatgaggatgggattaaaaaccctagcttctat 1125
Query: 1298 ctctacaaaacagaccaactcacaggcttggaacaagcgttgagtcaagaagagatccaa 1357
||||| ||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||
Sbjct: 1126 ctctataaagaagatcaactcacaggtttgaaacaagcaatgagtcaagaagagatccaa 1185
Query: 1358 aacaaagtggatttcatggaacttcttgcacaaaacaacgctagattagataacttgagc 1417
||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||
Sbjct: 1186 aacaaagtggatttcatggaatttcttgcaaaaaacaacgctaaattagataacttgagc 1245
Query: 1418 gaggaagagaaagaaaagttccaaactgagattggaaatttccaaaaagaccctaaggct 1477
||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1246 gagaaagagaaagaaaaattccaaactgagattggaaatttccaaaaagaccgtaaggct 1305
Query: 1478 tatttagactccctagggaatgatcgcattgcttttgtttctaaaaaagacc-aaaagca 1536
||||| ||| ||||||||||||||| |||||||||||||||||||||||| |||| ||
Sbjct: 1306 tatttggacgccctagggaatgatcatgttgcttttgtttctaaaaaagacccaaaa-ca 1364
Query: 1537 tttagctttggttactgagtttggtaatggggaattgagctatactctcaaagattatgg 1596
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1365 tttagctttggttactgagtttggtaatggggaagtgagctatactctcaaagattatgg 1424
Query: 1597 gaaaaaacaagatagagctttagatagggagacaaaaaccactcttcaaggtaacctaaa 1656
|||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 1425 gaaaaaacaagataaagctttagatggggagacaaaaaccactcttcaaggtagcctaaa 1484
Query: 1657 gcatgatggcgtgatgtttgtcaattattccaatttcaaatacaccaacgcctccaagag 1716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1485 atatgatggcgtgatgtttgtcaattattccaatttcaaatacaccaacgcctccaagag 1544
Query: 1717 tcctgatgagggtataggcgctacgaatggcgtttcccatttggaagcaaattttagcaa 1776
|||| || ||||| |||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1545 tcctaataagggtttaggtgctacgaatggcgtttcccatttggaggcaaattttagcaa 1604
Query: 1777 ggtggctgtctttaatttgcctgatttaaatggtctcgctatctctagttttgcaaggcg 1836
||| |||||||||||||| ||| |||||||| |||||||||| ||| || | ||||||
Sbjct: 1605 ggtagctgtctttaatttacctaatttaaataatctcgctatcactaattatataaggcg 1664
Query: 1837 gaatttagaggataaactgatcgctaaaggattgcccccaaaagacgctaataagatcat 1896
||||||| |||||| || | |||||||||||| ||||| |||| ||||||||| ||||
Sbjct: 1665 agatttagaagataaattgttggctaaaggattgtccccacaagaagctaataagctcat 1724
Query: 1897 caaagactttttgaacagcaacaaggaattgcttgaaaaagctttagacttcaataaagc 1956
|||||||||||||||||||||||| |||||||||| ||||| || | |||||||||||||
Sbjct: 1725 caaagactttttgaacagcaacaaagaattgcttggaaaagtttcaaacttcaataaagc 1784
Query: 1957 tgtagctgaagctaaaaatacaggcaattatgacggagtgaaaaaagctcaaaaagatct 2016
|||||||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||||
Sbjct: 1785 tgtagctgaagctaaaaacacaggcaattatgacgaagtgaaaaaggctcagaaagatct 1844
Query: 2017 tgaaaaatctataaggaaacgagagcgtttagagcaagaaataacgaaaaaatttgagaa 2076
|||||||||| ||||||||||||||| ||||||| ||||| || |||||||||| ||||
Sbjct: 1845 tgaaaaatctctaaggaaacgagagcatttagagaaagaagtagcgaaaaaattggagag 1904
Query: 2077 caagagcggcaacaaaaataaaatggaagcgaaagttcaagctaacagccaaaaagatgg 2136
|| | || ||||||||||| ||||||||| |||| ||||||||||||||||||||||
Sbjct: 1905 cagcaacgacaacaaaaatagaatggaagcaaaagctcaagctaacagccaaaaagataa 1964
Query: 2137 gatttttaagcttatcaatgaagaggctcataaggaagcaagaatcgccgcttacgctca 2196
||||||| | | |||||| |||||||| ||||||||||||| ||||||| || ||
Sbjct: 1965 gatttttgcgttgatcaatcaagaggctagtaaggaagcaagagcggccgctttcgatcc 2024
Query: 2197 gaatcttaaaggcatcaggagggaattgtttgataaagttaaaaatctcaacaagaattt 2256
|||||||||||||||||||| ||||||| ||||||| || ||||| |||||||||||||
Sbjct: 2025 gaatcttaaaggcatcaggaacgaattgtctgataaacttgaaaatatcaacaagaattt 2084
Query: 2257 gaaagactttgataaatcttttgatgcgctcaaaagtggcaaaaataaggatttcagcaa 2316
||||||||||| ||||||||||||| ||||||| |||||||||||| ||||||| |||
Sbjct: 2085 gaaagactttggcaaatcttttgatgaactcaaaaatggcaaaaataatgatttcaacaa 2144
Query: 2317 ggcagaagaaacgctaaaagcccttgaaag-ctcggtgaaagatttgggtatcaatccag 2375
||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||
Sbjct: 2145 ggcagaagaaacgctaaaagccctt-aaagactcggtgaaagatttaggtatcaatccag 2203
Query: 2376 aatggatttcaaaagttgaaaaccttaatgcagctttgaatgaattcaaaaatggcaaaa 2435
|||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2204 aatggatttcaaaaattgaaaaccttaatgcagctttgaatgatttcaaaaatggcaaaa 2263
Query: 2436 ataaggatttcagcaaggtaacacaagcaaaaagcgaccttgaaaattccattaaggatg 2495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2264 ataaggatttcagcaaggtaacacaagcaaaaagcgaccttgaaaattccattaaggatg 2323
Query: 2496 tgctcatcaatcaagagataacggataaagttgacaatctcaatcaggctgtat 2549
|| |||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2324 tgatcattaatcaaaagataacggataaagttgacaatctcaatcaggctgtat 2377
Score = 867 bits (2237), Expect = e-252
Identities = 469/504 (93%)
Strand = Plus / Plus
Query: 70 caacaatttatcaataatcttcaagtggcttttattaaacttgatagtgctgtcgcttca 129
|||| ||||||||||||||||||||| |||||||||||| |||||| ||||||||||||
Sbjct: 58 caacgatttatcaataatcttcaagtagcttttattaaagttgataacgctgtcgcttca 117
Query: 130 tttgatcccgatcaaaaaccaatcgttgataagaacgatagggataacaggcaagctttt 189
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 118 tttgatcccgatcaaaaaccaatcgttgataagaatgatagggataacaggcaagctttt 177
Query: 190 aatgtaatctcgcaattaagggaagaatacgccaataaagcgatcaaaaatcccaccaaa 249
| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 178 gagaaaatctcgcaactaagggaagaatacgccaataaagcgatcaaaaatcctaccaaa 237
Query: 250 aagaatcagtatttttcagactttatcgataaaagcaatgatttgatcaacaaaaacgat 309
||||||||||| ||||||||||||||| |||| ||||||||||||||||||||| || ||
Sbjct: 238 aagaatcagtacttttcagactttatcaataagagcaatgatttgatcaacaaagacaat 297
Query: 310 ctcattgatacagattcttccacaaagagctttgaaaaatttggggctcagcgttaccaa 369
||||||| | |||||||||| | |||||||| |||||||||| |||||||||||||
Sbjct: 298 ctcattgctgtagattcttccgtagagagctttcggaaatttggggatcagcgttaccaa 357
Query: 370 atttttatgaattgggtgtcccatcaaaaagatccgtctaaaatcaacacccaaaaaatc 429
||||||| || ||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 358 atttttacgagttgggtgtcccttcaaaaagatccgtctaaaatcaacacccaacaaatc 417
Query: 430 cgagattttatggaaaatatcatacaaccccctatctctgatgataaagaaaaagcggag 489
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 418 cgaaattttatggaaaatatcatacaaccccctatctctgatgataaggaaaaagcggag 477
Query: 490 tttttgaggtctgccaaacaatcttttgcaggaattatcatagggaaccaaacccgatcg 549
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 478 tttttgaggtctgccaaacaatcttttgcaggaattatcatagggaaccaaatccgatcg 537
Query: 550 gatgaaaaattcatgggcgttttt 573
|||||||||||||||||||| |||
Sbjct: 538 gatgaaaaattcatgggcgtgttt 561
Score = 492 bits (1270), Expect = e-139
Identities = 262/275 (95%)
Strand = Plus / Plus
Query: 3015 aagcgaaattggacaattacgctactaacagccacacacgcattaatagcaatgtcaaaa 3074
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 3131 aggcgaaattggacaattacgctactaacagccacacacgcattaatagcaatgtccaac 3190
Query: 3075 atggaacaatcaatgaaaaagcgatcggcatgctaacgcaaaaaaaccctgagtggctca 3134
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3191 atggaacaatcaatgaaaaagcgaccggcatgctaacgcaaaaaaaccctgagtggctca 3250
Query: 3135 agcttgtgaatgataagatagttgcgcataatgtgggaagcgctcctttgtcaggttatg 3194
|||| |||||||||||||||||||| ||||||||||||||||||| |||||||| ||||
Sbjct: 3251 agctcgtgaatgataagatagttgcacataatgtgggaagcgctcatttgtcagagtatg 3310
Query: 3195 ataaaattggattcaaccaaaagaatatgaaaggttattctgattcgttcaggttttcca 3254
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 3311 ataaaattggattcaaccaaaagaatatgaaagattattctgattcgttcaagttttcca 3370
Query: 3255 ccaagttgagcaatgccgtaaaaaacattaagtct 3289
||||||||| ||||||||||||| |||||||||||
Sbjct: 3371 ccaagttgaacaatgccgtaaaagacattaagtct 3405
Score = 373 bits (963), Expect = e-103
Identities = 203/217 (94%)
Strand = Plus / Plus
Query: 817 tggggattggcttgatatttttttatcgtttgtatttaacaaagaacaatcttctgatct 876
||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||
Sbjct: 615 tggggattggcttgatatttttttatcatttgtgtttaacaaaaaacaatcttccgatct 674
Query: 877 caaagaaacgctcaatcaagagccaaggcctcatgttgaacaaaatgtagcctctacccc 936
||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||| |
Sbjct: 675 caaagaaacgctcaatcaagagccaaggcctgattttgaacaaaatttagccactaccac 734
Query: 937 cacccacatacaaggcttaccgcctgaagctagggatttgcttgatgaaaggggtgattt 996
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 735 caccgacatacaaggcttaccgcctgaagctagagatttgcttgatgaaaggggtaattt 794
Query: 997 ttctaaattcactcttggtgatatggaaatgttggat 1033
|| ||||||||||||||||||| ||||||||||||||
Sbjct: 795 ttttaaattcactcttggtgatgtggaaatgttggat 831
Score = 242 bits (624), Expect = 4e-64
Identities = 136/155 (88%)
Strand = Plus / Plus
Query: 2803 agttgatgatctcagtaaggtagggctttcaagggagcaagaattgaatgagaaaattgg 2862
|||| ||||||||||||| ||||||||||||||||| |||||||||| | | ||||||
Sbjct: 2928 agttaatgatctcagtaaagtagggctttcaagggaacaagaattgactcgtagaattgg 2987
Query: 2863 caatctcaatcaggcagtgtcagaagctaaagcaggttcttttggcaacctagaacaaat 2922
| ||||||||||||| || |||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 2988 cgatctcaatcaggcggtatcagaagctaaaacaggtcattttgacaacctagaacaaaa 3047
Query: 2923 gatggatggactcaaagattctacaaaaaagaatg 2957
||| |||| ||||||||||||||| ||||||||||
Sbjct: 3048 gatagatgaactcaaagattctacgaaaaagaatg 3082
Score = 82 bits (211), Expect = 8e-16
Identities = 46/49 (94%)
Strand = Plus / Plus
Query: 767 gatgaatctttgaaagagaggcaagaagcacaaaacaatggagagcctg 815
|||||||||||||||||||||||||||||| |||| |||| ||||||||
Sbjct: 562 gatgaatctttgaaagagaggcaagaagcagaaaaaaatgcagagcctg 610
Score = 58 bits (149), Expect = 1e-08
Identities = 31/33 (94%)
Strand = Plus / Plus
Query: 2733 ggcaatcagatagccctgaacccatttacgcta 2765
||| ||||| |||||||||||||||||||||||
Sbjct: 2840 ggcgatcagctagccctgaacccatttacgcta 2872
Score = 49 bits (125), Expect = 7e-06
Identities = 26/28 (93%)
Strand = Plus / Plus
Query: 3373 tacaaaaagtggtttccagaaatcttaa 3400
||||||| |||||||||| |||||||||
Sbjct: 3492 tacaaaaggtggtttccaaaaatcttaa 3519
Score = 32 bits (83), Expect = 6e-01
Identities = 17/18 (94%)
Strand = Plus / Plus
Query: 3349 ggaacatggagttaaaaa 3366
|||||||||||| |||||
Sbjct: 3471 ggaacatggagtcaaaaa 3488
Score = 30 bits (77), Expect = 3e+00
Identities = 16/18 (89%)
Strand = Plus / Plus
Query: 2988 aagtgcctattagtttgc 3005
||||||||| | ||||||
Sbjct: 3113 aagtgcctactggtttgc 3130
Score = 23 bits (60), Expect = 3e+02
Identities = 12/12 (100%)
Strand = Plus / Plus
Query: 2721 tcagtaaggtag 2732
||||||||||||
Sbjct: 2402 tcagtaaggtag 2413
Score = 21 bits (54), Expect = 1e+03
Identities = 11/11 (100%)
Strand = Plus / Plus
Query: 1034 tacaagttcaa 1044
|||||||||||
Sbjct: 862 tacaagttcaa 872
Score = 13 bits (35), Expect = 3e+05
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 2972 tttgaag 2978
|||||||
Sbjct: 3084 tttgaag 3090 |