>AB190942|1|G1|52693798|BAD51752.1|Helicobacter_pylori_OK144|+|1..3552|cagA|-|cytotoxin
Length = 3552
Score = 2584 bits (6668), Expect = 0.0
Identities = 1413/1535 (92%)
Strand = Plus / Plus
Query: 1058 cacaataacgctctgtcttctatgctaatggggagtcatagcagcatagaacctgaaaaa 1117
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 892 cacaataacgctctatcttctgtgctaatggggagtcatagcagcatagaacctgaaaaa 951
Query: 1118 gtttcattgttgtatggggataatggtggtcctgaagctaggcatgattggaacgccacc 1177
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 gtttcattattgtatggggataatggtggtcctgaagctaggcatgattggaacgccacc 1011
Query: 1178 gttggttataaaaaccaacaaggcaacaatgtggccacactcatcaatgcgcatcttaaa 1237
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1012 gttggttataaaaaccaacaaggcaacaatgtggccacactcattaatgcgcatcttaat 1071
Query: 1238 aacggcagcgggttagtcatagcgggtaatggaaatgggattaacaaccctagcttctat 1297
|||||||| |||||||||||||||||||||| |||||||||||| || ||||||||||||
Sbjct: 1072 aacggcagtgggttagtcatagcgggtaatgaaaatgggattaaaaatcctagcttctat 1131
Query: 1298 ctctacaaaacagaccaactcacaggcttggaacaagcgttgagtcaagaagagatccaa 1357
||||||||| |||||| |||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 1132 ctctacaaagaagaccagctcacaggtttgaaacaagcgttgagtcaagaagagatccaa 1191
Query: 1358 aacaaagtggatttcatggaacttcttgcacaaaacaacgctagattagataacttgagc 1417
||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||
Sbjct: 1192 aacaaagtggatttcatggaatttcttgcaaaaaacaacgctaaattagataacttgagc 1251
Query: 1418 gaggaagagaaagaaaagttccaaactgagattggaaatttccaaaaagaccctaaggct 1477
||| ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 1252 gagaaagagaaagaaaaattccaaactgagattgaaaatttccaaaaagaccgtaaggct 1311
Query: 1478 tatttagactccctagggaatgatcgcattgcttttgtttctaaaaaagaccaaaagcat 1537
||||| ||| ||||||||||||||| ||||||||||||||||||||||||| |||| |||
Sbjct: 1312 tatttggacgccctagggaatgatcacattgcttttgtttctaaaaaagacaaaaaacat 1371
Query: 1538 ttagctttggttactgagtttggtaatggggaattgagctatactctcaaagattatggg 1597
|||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1372 ttagctttagttgctgagtttggtaatggggaattgagctacactctcaaagattatggg 1431
Query: 1598 aaaaaacaagatagagctttagatagggagacaaaaaccactcttcaaggtaacctaaag 1657
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1432 aaaaaacaagataaagctttagatagggagacaaaaaccactcttcaaggtaacctaaaa 1491
Query: 1658 catgatggcgtgatgtttgtcaattattccaatttcaaatacaccaacgcctccaagagt 1717
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1492 catgatggcgtgatgtttgttaattattctaatttcaaatacaccaacgcctccaagagt 1551
Query: 1718 cctgatgagggtataggcgctacgaatggcgtttcccatttggaagcaaattttagcaag 1777
|||||| ||||| | || ||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 1552 cctgataagggtgtgggtgctacgaatggcgtttcccatttggaagcaaatcttagtaag 1611
Query: 1778 gtggctgtctttaatttgcctgatttaaatggtctcgctatctctagttttgcaaggcgg 1837
|| |||||||||||||||||| |||||||| |||||||||| |||||| | ||||||
Sbjct: 1612 gtagctgtctttaatttgcctaatttaaataatctcgctatcactagttatataaggcga 1671
Query: 1838 aatttagaggataaactgatcgctaaaggattgcccccaaaagacgctaataagatcatc 1897
| ||||| ||||||||| |||||||||||| ||||| |||| |||||||| |||||
Sbjct: 1672 gacttagaagataaactgtgggctaaaggattgtccccacaagaaactaataagctcatc 1731
Query: 1898 aaagactttttgaacagcaacaaggaattgcttgaaaaagctttagacttcaataaagct 1957
||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||| ||
Sbjct: 1732 aaagactttttgaacagcaacaaagaattggttgaaaaagctttaaacttcaataaaact 1791
Query: 1958 gtagctgaagctaaaaatacaggcaattatgacggagtgaaaaaagctcaaaaagatctt 2017
||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 1792 gtagctgaagctaaaaacacaggcaattatgacgaagtgaaaaaagctcagaaagatctt 1851
Query: 2018 gaaaaatctataaggaaacgagagcgtttagagcaagaaataacgaaaaaatttgagaac 2077
||||||||| ||||||||||||||| ||||||| ||||| ||||||||||||| ||||
Sbjct: 1852 gaaaaatctctaaggaaacgagagcatttagagaaagaagtaacgaaaaaattggagaga 1911
Query: 2078 aagagcggcaacaaaaataaaatggaagcgaaagttcaagctaacagccaaaaagatggg 2137
|| |||| |||||||||| ||||||||| |||| |||||||||||||||||||||| |
Sbjct: 1912 aaaagcgataacaaaaatagaatggaagcaaaagctcaagctaacagccaaaaagataag 1971
Query: 2138 atttttaagcttatcaatgaagaggctcataaggaagcaagaatcgccgcttacgctcag 2197
|||||| ||||||||||||||||| ||||||||||||| | ||||||| || ||||
Sbjct: 1972 atttttgcaattatcaatgaagaggctggtaaggaagcaagagtagccgcttgcgttcag 2031
Query: 2198 aatcttaaaggcatcaggagggaattgtttgataaagttaaaaatctcaacaagaatttg 2257
||||||||||||||||| | |||||||| |||||| || |||| ||||||||||||||
Sbjct: 2032 aatcttaaaggcatcagaatggaattgtctgataagcttgaaaacatcaacaagaatttg 2091
Query: 2258 aaagactttgataaatcttttgatgcgctcaaaagtggcaaaaataaggatttcagcaag 2317
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 2092 aaagactttgataaatcttttgatgaattcaaaaatggcaaaaataaggatttcagcaag 2151
Query: 2318 gcagaagaaacgctaaaagcccttgaaag-ctcggtgaaagatttgggtatcaatccaga 2376
||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||
Sbjct: 2152 acagaagaaacgctaaaagccctt-aaagactcggtgaaagatttaggtatcaatccaga 2210
Query: 2377 atggatttcaaaagttgaaaaccttaatgcagctttgaatgaattcaaaaatggcaaaaa 2436
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2211 atggatttcaaaagttgaaaaccttaatacagctttgaatgaattcaaaaatggcaaaaa 2270
Query: 2437 taaggatttcagcaaggtaacacaagcaaaaagcgaccttgaaaattccattaaggatgt 2496
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 2271 taaggatttcagcaaggtaacgcaagcaaaaagcgaccttgaaaattccattaaagatgt 2330
Query: 2497 gctcatcaatcaagagataacggataaagttgacaatctcaatcaggctgtattaagggc 2556
| ||||||||||| ||||||||||||||||||||||||||||||| ||||||| || ||
Sbjct: 2331 gatcatcaatcaaaagataacggataaagttgacaatctcaatcaagctgtatcaatagc 2390
Query: 2557 taaagcgataggcgattttagtggggtagagcaag 2591
|||||| | || ||||| ||| ||||||||||||
Sbjct: 2391 taaagcaacgggtgatttcagtagggtagagcaag 2425
Score = 898 bits (2318), Expect = e-261
Identities = 491/540 (91%)
Strand = Plus / Plus
Query: 37 gatcaaacaccaagccaaacggcttttaatccacaacaatttatcaataatcttcaagtg 96
|||||||| ||||||||||| |||||||| || || |||||||||||||||||||||||
Sbjct: 19 gatcaaaccccaagccaaacagcttttaacccgcagcaatttatcaataatcttcaagta 78
Query: 97 gcttttattaaacttgatagtgctgtcgcttcatttgatcccgatcaaaaaccaatcgtt 156
|||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 79 gcttttcttaaagttgataacgctgtcgcttcatttgatcctgatcaaaaaccaatcgtt 138
Query: 157 gataagaacgatagggataacaggcaagcttttaatgtaatctcgcaattaagggaagaa 216
|||||||| |||||||||||||||||||||||| | |||||||||| ||||||| |||
Sbjct: 139 gataagaatgatagggataacaggcaagcttttgagaaaatctcgcaactaagggaggaa 198
Query: 217 tacgccaataaagcgatcaaaaatcccaccaaaaagaatcagtatttttcagactttatc 276
| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 199 ttcgctaataaagcgatcaaaaatcctgccaaaaagaatcagtatttttcaaactttatc 258
Query: 277 gataaaagcaatgatttgatcaacaaaaacgatctcattgatacagattcttccacaaag 336
||| |||| |||||| ||||||||| || |||||||||||||| |||||||| ||||
Sbjct: 259 agtaagagcagtgatttaatcaacaaagacagtctcattgatacaggttcttccataaag 318
Query: 337 agctttgaaaaatttggggctcagcgttaccaaatttttatgaattgggtgtcccatcaa 396
|||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 agctttcagaaatttgggactcagcgttaccaaatttttatgaattgggtgtcccatcaa 378
Query: 397 aaagatccgtctaaaatcaacacccaaaaaatccgagattttatggaaaatatcatacaa 456
|||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 379 aaagatccatctaaaatcaacacccaaagaatccgaagttttatggaaaatatcatacaa 438
Query: 457 ccccctatctctgatgataaagaaaaagcggagtttttgaggtctgccaaacaatctttt 516
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 439 ccccctatctctgatgataaagaaaaagcggagtttttgaggtctgccaaacaagctttt 498
Query: 517 gcaggaattatcatagggaaccaaacccgatcggatgaaaaattcatgggcgtttttgga 576
||||||||||||||||| ||||| | || ||| ||| |||||||||||||||| |||| |
Sbjct: 499 gcaggaattatcataggaaaccagatccaatcagatcaaaaattcatgggcgtgtttgaa 558
Score = 506 bits (1306), Expect = e-143
Identities = 272/295 (92%)
Strand = Plus / Plus
Query: 3016 agcgaaattggacaattacgctactaacagccacacacgcattaatagcaatgtcaaaaa 3075
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3159 agcgaaattggacgattatgctactaacagccacacacgcattaatagcaatgtcaaaaa 3218
Query: 3076 tggaacaatcaatgaaaaagcgatcggcatgctaacgcaaaaaaaccctgagtggctcaa 3135
|||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 3219 tggagcaatcaatgaaaaagcgactggtatgctaacgcaaaaaaaccctgagtggctcaa 3278
Query: 3136 gcttgtgaatgataagatagttgcgcataatgtgggaagcgctcctttgtcaggttatga 3195
||| ||||||||||||||||||||||||||||||||||||| | ||||||||| |||||
Sbjct: 3279 gctcgtgaatgataagatagttgcgcataatgtgggaagcgtttctttgtcagagtatga 3338
Query: 3196 taaaattggattcaaccaaaagaatatgaaaggttattctgattcgttcaggttttccac 3255
||||||||| |||||||| ||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 3339 taaaattggcttcaaccagaagaatatgaaagattattctgattcgttcaagttttccac 3398
Query: 3256 caagttgagcaatgccgtaaaaaacattaagtctgactttaagcaacttttaacc 3310
|||||||| |||||| ||||| |||||||||||| |||| |||| ||||||||
Sbjct: 3399 caagttgaacaatgctataaaagacattaagtctggctttgtgcaatttttaacc 3453
Score = 377 bits (973), Expect = e-105
Identities = 206/221 (93%)
Strand = Plus / Plus
Query: 813 ctgttggggattggcttgatatttttttatcgtttgtatttaacaaagaacaatcttctg 872
||| ||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |
Sbjct: 617 ctggtggggattggcttgatatttttttatcatttgtgtttaacaaaaaacaatcttccg 676
Query: 873 atctcaaagaaacgctcaatcaagagccaaggcctcatgttgaacaaaatgtagcctcta 932
||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||
Sbjct: 677 atctcaaagaaacgctcaatcaagagccaaggcctgattttgaacaaaatttagccacta 736
Query: 933 cccccacccacatacaaggcttaccgcctgaagctagggatttgcttgatgaaaggggtg 992
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ccaccaccgacatacaaggcttaccgcctgaagctagggatttgcttgatgaaaggggta 796
Query: 993 atttttctaaattcactcttggtgatatggaaatgttggat 1033
|||||| ||||||||||||||||||| |||| |||||||||
Sbjct: 797 atttttttaaattcactcttggtgatgtggagatgttggat 837
Score = 372 bits (961), Expect = e-103
Identities = 210/241 (87%)
Strand = Plus / Plus
Query: 2766 atctcggcggatcttcccctttgaaaaggtatgctaaagttgatgatctcagtaaggtag 2825
||||||||||| ||| ||||||||||| | ||| |||||||| |||||||||||||||||
Sbjct: 2918 atctcggcggacctttccctttgaaaaagcatgataaagttggtgatctcagtaaggtag 2977
Query: 2826 ggctttcaagggagcaagaattgaatgagaaaattggcaatctcaatcaggcagtgtcag 2885
||||||||||||||||||||||||| | || |||| ||||||||||||||| || ||||
Sbjct: 2978 ggctttcaagggagcaagaattgaaacaaaagattgacaatctcaatcaggcggtatcag 3037
Query: 2886 aagctaaagcaggttcttttggcaacctagaacaaatgatggatggactcaaagattcta 2945
||||||||||| || ||||| ||||||||| |||||||| || |||||||||||||
Sbjct: 3038 aagctaaagcatgtcattttgacaacctagatcaaatgatagacaagctcaaagattcta 3097
Query: 2946 caaaaaagaatgttgtgaatctatggtttgaaggtgcaagaaaagtgcctattagtttgc 3005
|||||||||||||| ||||||||| ||||| |||||| ||||||||||| |||||||
Sbjct: 3098 caaaaaagaatgttatgaatctatatgttgaaagtgcaaaaaaagtgcctactagtttgt 3157
Query: 3006 c 3006
|
Sbjct: 3158 c 3158
Score = 115 bits (298), Expect = 5e-26
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 2691 ctttgaaaaggtatgctaaagttgatgatctcagtaaggtagggcaatcagatagccctg 2750
|||||||| || || ||||||||| |||||||||||||||||||| |||| || || ||
Sbjct: 2834 ctttgaaagggcatactaaagttggtgatctcagtaaggtagggctttcagctaaccatg 2893
Query: 2751 aacccatttacgcta 2765
|||||||||||||||
Sbjct: 2894 aacccatttacgcta 2908
Score = 72 bits (185), Expect = 7e-13
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 770 gaatctttgaaagagaggcaagaagcacaaaacaatggagagc 812
|||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 559 gaatctttgaaagaaaggcaagaagcagaaaaaaatggagagc 601
Score = 21 bits (54), Expect = 1e+03
Identities = 11/11 (100%)
Strand = Plus / Plus
Query: 1034 tacaagttcaa 1044
|||||||||||
Sbjct: 868 tacaagttcaa 878 |