>AB190937|1|G1|52693788|BAD51747.1|Helicobacter_pylori_OK111|+|1..3645|cagA|-|cytotoxin
Length = 3645
Score = 1544 bits (3984), Expect = 0.0
Identities = 854/956 (89%)
Strand = Plus / Plus
Query: 1636 cactcttcaaggtaacctaaagcatgatggcgtgatgtttgtcaattattccaatttcaa 1695
|||||||||||||| |||||| |||||||||||||||||||| ||||||| ||||||||
Sbjct: 1461 cactcttcaaggtagcctaaaacatgatggcgtgatgtttgttgattattctaatttcaa 1520
Query: 1696 atacaccaacgcctccaagagtcctgatgagggtataggcgctacgaatggcgtttccca 1755
|||||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||
Sbjct: 1521 atacaccaacgcctccaagagtcccaataagggtgtaggcgttacgaatggcgtttccca 1580
Query: 1756 tttggaagcaaattttagcaaggtggctgtctttaatttgcctgatttaaatggtctcgc 1815
||| |||||| |||| |||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 1581 tttagaagcaggctttaacaaggtagctgtctttaatttgcctgatttaaataatctcgc 1640
Query: 1816 tatctctagttttgcaaggcggaatttagaggataaactgatcgctaaaggattgccccc 1875
|||| ||||||| | |||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 1641 tatcactagtttcgtaaggcggaatttagaggataaactagtcgctaaaggattgtcccc 1700
Query: 1876 aaaagacgctaataagatcatcaaagactttttgaacagcaacaaggaattgcttgaaaa 1935
| |||| ||||||||| |||||||||| ||||||| ||||||||| |||||| ||| |||
Sbjct: 1701 acaagaagctaataagctcatcaaagattttttgagcagcaacaaagaattggttggaaa 1760
Query: 1936 agctttagacttcaataaagctgtagctgaagctaaaaatacaggcaattatgacggagt 1995
||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| | |||
Sbjct: 1761 agctttaaacttcaataaagctgtagctgaagctaaaaacacaggcaactatgatgaagt 1820
Query: 1996 gaaaaaagctcaaaaagatcttgaaaaatctataaggaaacgagagcgtttagagcaaga 2055
|||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| ||||
Sbjct: 1821 gaaaaaagctcagaaagatcttgaaaaatctctaaggaaacgagagcatttagagaaaga 1880
Query: 2056 aataacgaaaaaatttgagaacaagagcggcaacaaaaataaaatggaagcgaaagttca 2115
| || ||||||||| |||| ||| ||||| |||||||| ||||||||||| ||| |||
Sbjct: 1881 agtagagaaaaaattggagagcaaaagcggtaacaaaaacaaaatggaagcaaaatctca 1940
Query: 2116 agctaacagccaaaaagatgggatttttaagcttatcaatgaagaggctcataaggaagc 2175
||||||||||||||||||||||||||||| | | |||||| |||||||| ||| || ||
Sbjct: 1941 agctaacagccaaaaagatgggatttttatgttgatcaataaagaggctaatagagacgc 2000
Query: 2176 aagaatcgccgcttacgctcagaatcttaaaggcatcaggagggaattgtttgataaagt 2235
|||| ||||||||||||||||||||||||||||| |||||||||| ||||||| |
Sbjct: 2001 aagagcaatcgcttacgctcagaatcttaaaggcatcaaaagggaattgtctgataaact 2060
Query: 2236 taaaaatctcaacaagaatttgaaagactttgataaatcttttgatgcgctcaaaagtgg 2295
| ||||| ||||||||||||||||||||||| |||||||||||||| |||||| |||
Sbjct: 2061 tgaaaatgtcaacaagaatttgaaagactttagtaaatcttttgatgaattcaaaaatgg 2120
Query: 2296 caaaaataaggatttcagcaaggcagaagaaacgctaaaagcccttgaaagctcggtgaa 2355
||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||
Sbjct: 2121 caaaaataaggatttcagcaaggcagaagaaacactaaaagcccttaaaggctcggtgaa 2180
Query: 2356 agatttgggtatcaatccagaatggatttcaaaagttgaaaaccttaatgcagctttgaa 2415
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2181 agatttaggtatcaatccagaatggatttcaaaagttgaaaatcttaatgcagctttgaa 2240
Query: 2416 tgaattcaaaaatggcaaaaataaggatttcagcaaggtaacacaagcaaaaagcgacct 2475
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2241 tgacttcaaaaatggcaaaaataaggatttcagcaaggtaacgcaagcaaaaagcgacct 2300
Query: 2476 tgaaaattccattaaggatgtgctcatcaatcaagagataacggataaagttgacaatct 2535
||||||||||||||| |||| | || |||||||| ||||||||||||||||||| ||||
Sbjct: 2301 tgaaaattccattaaagatgcgatcttcaatcaaaagataacggataaagttgatgatct 2360
Query: 2536 caatcaggctgtattaagggctaaagcgataggcgattttagtggggtagagcaag 2591
|||||| || |||| | ||||||||| | || ||||| ||| ||||||||||||
Sbjct: 2361 caatcaagcggtatcagtggctaaagcaacgggtgatttcagtagggtagagcaag 2416
Score = 909 bits (2346), Expect = e-265
Identities = 522/601 (87%)
Strand = Plus / Plus
Query: 1034 tacaagttcaaccagttaccgattcacaataacgctctgtcttctatgctaatggggagt 1093
||||||||||| || ||| |||||||||||||| |||||||||| || |||| ||||||
Sbjct: 859 tacaagttcaatcaattattgattcacaataacgttctgtcttctgtgttaatagggagt 918
Query: 1094 catagcagcatagaacctgaaaaagtttcattgttgtatggggataatggtggtcctgaa 1153
|||| ||||||||||||||||||||||||| ||||||| || ||||||||| || |
Sbjct: 919 cataatggcatagaacctgaaaaagtttcattattgtatgcgggcaatggtggttttgga 978
Query: 1154 gctaggcatgattggaacgccaccgttggttataaaaaccaacaaggcaacaatgtggcc 1213
|| | || ||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 979 gccaaacacgattggaacgccaccgttggttataaagaccaacaaggtaacaatgtggct 1038
Query: 1214 acactcatcaatgcgcatcttaaaaacggcagcgggttagtcatagcgggtaatggaaat 1273
||| | || |||| |||| | ||||||||||| || ||||||||||| ||| || ||
Sbjct: 1039 acaataattaatgtgcatatgaaaaacggcagtggcttagtcatagcaggtggtgagaaa 1098
Query: 1274 gggattaacaaccctagcttctatctctacaaaacagaccaactcacaggcttggaacaa 1333
|||||||| || ||||| || |||||||||||| ||||||||||||||||| ||| |
Sbjct: 1099 gggattaataatcctagtttttatctctacaaagaagaccaactcacaggctcacaacga 1158
Query: 1334 gcgttgagtcaagaagagatccaaaacaaagtggatttcatggaacttcttgcacaaaac 1393
|| ||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||
Sbjct: 1159 gcattgagtcaagaagagatccgaaacaaagtagatttcatggaatttcttgcacaaaat 1218
Query: 1394 aacgctagattagataacttgagcgaggaagagaaagaaaagttccaaactgagattgga 1453
|| |||| |||||| |||||||||||| ||||||||||||| |||| ||||||||||
Sbjct: 1219 aatgctaaattagacaacttgagcgagaaagagaaagaaaaattccgaactgagattaag 1278
Query: 1454 aatttccaaaaagaccctaaggcttatttagactccctagggaatgatcgcattgctttt 1513
|||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 1279 gatttccaaaaagactctaaggcttatttagacgccctagggaatgatcgtattgctttt 1338
Query: 1514 gtttctaaaaaagacc-aaaagcatttagctttggttactgagtttggtaatggggaatt 1572
|||||||||||||||| |||| |||| |||||| |||||||||||||||||||||| ||
Sbjct: 1339 gtttctaaaaaagacccaaaa-cattcagctttaattactgagtttggtaatggggattt 1397
Query: 1573 gagctatactctcaaagattatgggaaaaaacaagatagagctttagatagggagacaaa 1632
||||| |||||||||||||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 1398 tagctacactctcaaagattatgggaaaaaagcagataaagctttagatagggaga-aaa 1456
Query: 1633 a 1633
|
Sbjct: 1457 a 1457
Score = 770 bits (1986), Expect = e-223
Identities = 424/470 (90%)
Strand = Plus / Plus
Query: 104 ttaaacttgatagtgctgtcgcttcatttgatcccgatcaaaaaccaatcgttgataaga 163
|||| ||||||| |||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 89 ttaagcttgataacgctgtcgcttcatttgatcctgatcaaaaaccaattgttgataaga 148
Query: 164 acgatagggataacaggcaagcttttaatgtaatctcgcaattaagggaagaatacgcca 223
| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||
Sbjct: 149 atgatagggataacaggcaagcttttgatggaatctcgcaattaagggaagaatactcca 208
Query: 224 ataaagcgatcaaaaatcccaccaaaaagaatcagtatttttcagactttatcgataaaa 283
||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |
Sbjct: 209 ataaagcgatcaaaaatcctaccaaaaagaatcagtatttttcagactttatcaataaga 268
Query: 284 gcaatgatttgatcaacaaaaacgatctcattgatacagattcttccacaaagagctttg 343
|||||||| | ||||||||| || ||||||||||| ||| ||||||||||||||||||
Sbjct: 269 gcaatgatctaatcaacaaagacaatctcattgatgtagaatcttccacaaagagctttc 328
Query: 344 aaaaatttggggctcagcgttaccaaatttttatgaattgggtgtcccatcaaaaagatc 403
| |||||||||| ||||||||||| |||||| | | |||||||||||||||||| ||||
Sbjct: 329 agaaatttggggatcagcgttaccgaattttcacaagttgggtgtcccatcaaaacgatc 388
Query: 404 cgtctaaaatcaacacccaaaaaatccgagattttatggaaaatatcatacaacccccta 463
|||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||
Sbjct: 389 cgtctaaaatcaacacccgatcgatccgaaattttatggaaaatatcatacaacccccta 448
Query: 464 tctctgatgataaagaaaaagcggagtttttgaggtctgccaaacaatcttttgcaggaa 523
|| ||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 449 tccctgatgacaaagaaaaagcagagtttttgaaatctgccaaacaatcttttgcaggaa 508
Query: 524 ttatcatagggaaccaaacccgatcggatgaaaaattcatgggcgttttt 573
| || |||||||| |||| |||| ||||| |||| ||||||||||| |||
Sbjct: 509 tcattatagggaatcaaatccgaacggatcaaaagttcatgggcgtgttt 558
Score = 504 bits (1301), Expect = e-143
Identities = 271/292 (93%)
Strand = Plus / Plus
Query: 3016 agcgaaattggacaattacgctactaacagccacacacgcattaatagcaatgtcaaaaa 3075
||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3255 agcgaaactagacaattacgctactaacagccacacacgcattaatagcaatgtccaaaa 3314
Query: 3076 tggaacaatcaatgaaaaagcgatcggcatgctaacgcaaaaaaaccctgagtggctcaa 3135
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3315 tggagcaatcaatgaaaaagcgaccggcatgctaacgcaaaaaaaccctgagtggctcaa 3374
Query: 3136 gcttgtgaatgataagatagttgcgcataatgtgggaagcgctcctttgtcaggttatga 3195
||| |||||||||||||||||||| |||||||||||||||| ||||||||||| |||||
Sbjct: 3375 gctcgtgaatgataagatagttgcacataatgtgggaagcgttcctttgtcagagtatga 3434
Query: 3196 taaaattggattcaaccaaaagaatatgaaaggttattctgattcgttcaggttttccac 3255
||||||||| |||||||| ||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 3435 taaaattggcttcaaccagaagaatatgaaagattattctgattcgttcaagttttccac 3494
Query: 3256 caagttgagcaatgccgtaaaaaacattaagtctgactttaagcaactttta 3307
|||||||| |||||| |||||| || ||||||||| ||||| |||| |||||
Sbjct: 3495 caagttgaacaatgctgtaaaagacgttaagtctggctttacgcaattttta 3546
Score = 400 bits (1032), Expect = e-111
Identities = 235/270 (87%)
Strand = Plus / Plus
Query: 767 gatgaatctttgaaagagaggcaagaagcacaaaacaatggagagcc---tgttggggat 823
|||||||| |||||||| |||||||||||| |||| ||||||| ||| || |||||||
Sbjct: 559 gatgaatccttgaaagaaaggcaagaagcagaaaaaaatggagggcctactggtggggat 618
Query: 824 tggcttgatatttttttatcgtttgtatttaacaaagaacaatcttctgatctcaaagaa 883
||| | ||||||||| | |||||| ||||| ||||| |||||||||||||| ||||||||
Sbjct: 619 tggttggatatttttctctcgtttatatttgacaaaaaacaatcttctgatgtcaaagaa 678
Query: 884 acgctcaatcaagagccaaggcctcatgttgaacaaaatgtagcctctacccccacccac 943
| |||||||||||||| || ||||| ||| | || ||||| ||||| ||||| ||
Sbjct: 679 gcaatcaatcaagagccagttccccatgtccaaccagatatagccactaccaccaccgac 738
Query: 944 atacaaggcttaccgcctgaagctagggatttgcttgatgaaaggggtgatttttctaaa 1003
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 739 atacaaggcttaccgcctgaagctagggatttgcttgatgaaaggggtaatttttctaaa 798
Query: 1004 ttcactcttggtgatatggaaatgttggat 1033
||||||||||| |||||||||||||| |||
Sbjct: 799 ttcactcttggcgatatggaaatgttagat 828
Score = 346 bits (892), Expect = 3e-95
Identities = 206/242 (85%)
Strand = Plus / Plus
Query: 2766 atctcggcggatcttcccctttgaaaaggtatgctaaagttgatgatctcagtaaggtag 2825
||||||||||| ||| ||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 3014 atctcggcggacctttccctttgaaaaggcatgataaagttgatgatctcagtaaggtag 3073
Query: 2826 ggctttcaagggagcaagaattgaatgagaaaattggcaatctcaatcaggcagtgtcag 2885
||||||||||| | ||||||||| | ||||||||| |||||||| ||| || |||||||
Sbjct: 3074 ggctttcaaggaatcaagaattggctcagaaaattgacaatctcagtcaagcggtgtcag 3133
Query: 2886 aagctaaagcaggtt-cttttggcaacctagaacaaatgatggatggactcaaagattct 2944
||||||||||||||| |||| ||||| ||||| |||| ||| || ||||||||||||
Sbjct: 3134 aagctaaagcaggtttcttt-ggcaatctagagcaaacgatagacaagctcaaagattct 3192
Query: 2945 acaaaaaagaatgttgtgaatctatggtttgaaggtgcaagaaaagtgcctattagtttg 3004
|||||| | ||| ||||||||||| |||| |||||| |||||||||| |||||||
Sbjct: 3193 acaaaacacaatcccatgaatctatgggctgaaagtgcaaaaaaagtgcctgctagtttg 3252
Query: 3005 cc 3006
|
Sbjct: 3253 tc 3254
Score = 190 bits (490), Expect = 2e-48
Identities = 102/110 (93%)
Strand = Plus / Plus
Query: 2656 ttatgctacgattgatgatctcggcggatcttcccctttgaaaaggtatgctaaagttga 2715
|||||||||||||||||||||||||||| ||| ||||||||||||| ||| |||||||||
Sbjct: 2895 ttatgctacgattgatgatctcggcggacctttccctttgaaaaggcatgataaagttga 2954
Query: 2716 tgatctcagtaaggtagggcaatcagatagccctgaacccatttacgcta 2765
|||||||||||||||||||| ||| | |||||||||||||||||| ||||
Sbjct: 2955 tgatctcagtaaggtagggcgatcggttagccctgaacccatttatgcta 3004
Score = 37 bits (97), Expect = 2e-02
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 2635 tcaaaaaaatgaaagtttcaa 2655
|||||||||||||||| ||||
Sbjct: 2466 tcaaaaaaatgaaagtctcaa 2486
Score = 23 bits (60), Expect = 3e+02
Identities = 12/12 (100%)
Strand = Plus / Plus
Query: 92 aagtggctttta 103
||||||||||||
Sbjct: 38 aagtggctttta 49
Score = 13 bits (35), Expect = 3e+05
Identities = 7/7 (100%)
Strand = Plus / Plus
Query: 3314 tgcattt 3320
|||||||
Sbjct: 3552 tgcattt 3558 |