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Homologs of hrpF gene of AB045312

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrpF
( YP_005630689.1 )

type III secretion translocon protein HrpF

NC_017267
(Xanthomonas oryzae BLS256)

0.0

2) hrpF
( YP_362142.1 )

HrpF protein

NC_007508
(Xanthomonas campestris 85-10)

0.0

3) XOO_0109
( YP_449138.1 )

HrpF protein

NC_007705
(Xanthomonas oryzae MAFF 311018)

0.0

100

4) hrpF
( YP_001911263.1 )

HrpF/NolX/HrpK

NC_010717
(Xanthomonas oryzae PXO99A)

0.0

5) hrpF
( YP_198705.1 )

HrpF protein

NC_006834
(Xanthomonas oryzae KACC10331)

0.0

6) hrpF
( YP_004849989.1 )

HrpF protein

NC_016010
(Xanthomonas axonopodis F1)

0.0

7) hrpF
( YP_007648817.1 )

HrpF protein

NC_020815
(Xanthomonas citri Aw12879)

0.0

8) hrpF
( NP_640749.1 )

HrpF protein

NC_003919
(Xanthomonas axonopodis 306)

0.0

9) XAC29_02025
( YP_007634898.1 )

HrpF protein

NC_020800
(Xanthomonas axonopodis Xac29-1)

0.0

10) hrpF
( YP_001904493.1 )

type III secretion system host membrane insertion protein

NC_010688
(Xanthomonas campestris B100)

0.0

11) XC_3025
( YP_244093.1 )

HrpF protein

NC_007086
(Xanthomonas campestris 8004)

0.0

12) hrpF
( NP_636591.1 )

HrpF protein

NC_003902
(Xanthomonas campestris ATCC 33913)

0.0

13) XCR_1459
( YP_005636476.1 )

type III secretion translocon protein HrpF

NC_017271
(Xanthomonas campestris 756C)

0.0

14) popF2
( YP_006032712.1 )

secreted protein popf2

NC_017575
(Ralstonia solanacearum Po82)

1e-113

15) popF1
( NP_523114.1 )

hypothetical protein

NC_003296
(Ralstonia solanacearum GMI1000)

4e-110

16) F504_5021
( YP_008238746.1 )

Type III secretion translocator of effector proteins (HrpF, NolX)

NC_021745
(Ralstonia solanacearum FQY_4)

1e-109

• Sequence Alignments

1) hrpF in NC_017267


> AB045312|1|G1|9711604|BAB07869.1|Xanthomonas_oryzae_pv._oryzae_MAFF_311018|+|593..2965|hrpF|-|HrpF
Length=790

 Score = 1069 bits (4053),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 758/789 (97%), Positives = 769/789 (98%), Gaps = 12/789 (1%)

Query  1    MSLNMLSTGSNPsqllgtssnessssdlfgsdssrdgFDLPSTMDTLFQQIYLVLAALQA  60
            MSLNMLSTGSNPSQLLGTSSNESSSS+LFGSDSS DG DLPSTMDT+FQQIYL+LAALQA
Sbjct  1    MSLNMLSTGSNPSQLLGTSSNESSSSELFGSDSSNDGSDLPSTMDTIFQQIYLLLAALQA  60

Query  61   NTQTGASGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLDYDFDPKNIKGKDAPPA  120
            NTQT+ASGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSL+YDFDPKNIKGKDAPPA
Sbjct  61   NTQTSASGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPPA  120

Query  121  LEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPPDLKAALQGLKQ  180
            LEGSTVTWNDGTLTKSELQIVSTLNAHKDQMP+EYKNLDDKINDPSTPPDLKAALQGLKQ
Sbjct  121  LEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLKQ  180

Query  181  DPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAE  240
            DPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAE
Sbjct  181  DPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAE  240

Query  241  GSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKEALKGLQKD  300
            GSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLK ALKGLQKD
Sbjct  241  GSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQKD  300

Query  301  PRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKA  360
            PRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKA
Sbjct  301  PRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKA  360

Query  361  SVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWK  420
            SVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWK
Sbjct  361  SVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWK  420

Query  421  EFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISKD  480
            EFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISKD
Sbjct  421  EFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISKD  480

Query  481  DKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQFYDH  540
            +KADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQFYDH
Sbjct  481  NKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQFYDH  540

Query  541  MSAANKTVNTPATHEASSPDQQKAVADMLMGkddppaikkpkkdVGTFQQGLHEFLKWDS  600
            MSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIKKPKKDVGTFQQGLHEFLKWDS
Sbjct  541  MSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIKKPKKDVGTFQQGLHEFLKWDS  600

Query  601  KILDWMSVGLSALNGIPVIGEIADAASIALESEAQAAQVVDTAIQGGDMSLALKLAGINM  660
            KILDWMSVGLSALNGIPVIGEIADAA+IALESEAQAAQVVDTAIQGGDMSLALKLAGINM
Sbjct  601  KILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQVVDTAIQGGDMSLALKLAGINM  660

Query  661  agavvgavggPTARIgakgaakgvaevaakeaaegaakgtakgaakgagktaaeRPSAAE  720
            AGAVVGAVGGPTARI            +AKEAAEGAAKGTAKGAAKGAGKTAAERPSAA 
Sbjct  661  AGAVVGAVGGPTARI------------GAKEAAEGAAKGTAKGAAKGAGKTAAERPSAAA  708

Query  721  FAKGYVAGSNISKSTEILKTPVMAGLHYEEYQLDKQKDGEIHQKLEHAGGVPVGKQIIPK  780
            FAKGYVAGS ISKSTEILK PVMAGLHYEEYQLDKQKDGEIHQKL++AGG PVGKQIIP 
Sbjct  709  FAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDNAGGAPVGKQIIPT  768

Query  781  GIADNFEGD  789
            GIADNFEGD
Sbjct  769  GIADNFEGD  777

2) hrpF in NC_007508


> AB045312|1|G1|9711604|BAB07869.1|Xanthomonas_oryzae_pv._oryzae_MAFF_311018|+|593..2965|hrpF|-|HrpF
Length=790

 Score = 1042 bits (3949),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 723/793 (92%), Positives = 761/793 (96%), Gaps = 16/793 (2%)

Query  1    MSLNTLSTGSNPSQllgtsfnessssellgsdsskdgsdlpsTMDNIFQRIYLLLEALQA  60
            MSLN LSTGSNPSQLLGTS NESSSSEL+GSDSS+DGSDLPSTMD IFQ+IYLLL ALQA
Sbjct  1    MSLNMLSTGSNPSQLLGTSSNESSSSELFGSDSSNDGSDLPSTMDTIFQQIYLLLAALQA  60

Query  61   NTPNSASGNAPANTASGDADTQLSASDWQATQPIEKRTSWPSLGYDFDPKHIKGKDAPPA  120
            NT  SASG++PANTASGDADTQ+SASDWQATQPIEKRTSWPSLGYDFDPK+IKGKDAPPA
Sbjct  61   NTQTSASGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPPA  120

Query  121  LEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQGLKQ  180
            LEGSTVTWNDGTLTKSELQIVSTLNAHKDQMP+EYKNLDDKINDPSTP+DLKAALQGLKQ
Sbjct  121  LEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLKQ  180

Query  181  DPRLFFAIGSQGDGKCGGKISAQDLWDFSDSHPQVKELGGKNDEFNPKNIKGSNPPPAAE  240
            DPRLFFAIGSQGDGKCGGK+SAQDLWDFSDSHPQVK+LGGKNDEFNPK+IKGSNPP AAE
Sbjct  181  DPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAE  240

Query  241  GSTVTWNEGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALQGLQKD  300
            GSTVTWN+GQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKAL+GLQKD
Sbjct  241  GSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQKD  300

Query  301  PRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKQAKSYTQNYIASDSPDKTKA  360
            PRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDK+AKSYTQNYIASDSPDKTKA
Sbjct  301  PRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKA  360

Query  361  SVMTKSDALRELYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQVIAAAQYFRDHPDEWK  420
            SVMTKSDALRE+YRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQ+IAAAQYFRDHPDEWK
Sbjct  361  SVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWK  420

Query  421  EFAGDSGSMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKEITRDKLDAISKD  480
            EF+GD+G+MSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKE+TRDKLDAISKD
Sbjct  421  EFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISKD  480

Query  481  DKADPAVKQAATQLLADPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQDDFRQFYDH  540
            +KADPAVK+AATQL +DPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQ+DFRQFYDH
Sbjct  481  NKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQFYDH  540

Query  541  MSAANKTVDTPATHEASSPDQQKAVADMLVGkddppaikkpkkdVGTFQQGLHEFLKWDS  600
            MSAANKTV+TPATHEASSPDQQKAVADML+GKDDPPAIKKPKKDVGTFQQGLHEFLKWDS
Sbjct  541  MSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIKKPKKDVGTFQQGLHEFLKWDS  600

Query  601  KILDWMSVGLSALNGIPIIGEIADAASIALESEAQAAQVVDTAIQGGDMSLALKLAGINM  660
            KILDWMSVGLSALNGIP+IGEIADAA+IALESEAQAAQVVDTAIQGGDMSLALKLAGINM
Sbjct  601  KILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQVVDTAIQGGDMSLALKLAGINM  660

Query  661  agavvgavggPTARIgakgvakgvaeaaakeaaegaakgaakgtaksvakgggktaaERP  720
            AGAVVGAVGGPTARI                +A  AA GAAKGTAK+ AKG+GKTAAERP
Sbjct  661  AGAVVGAVGGPTARI----------------GAKEAAEGAAKGTAKGAAKGAGKTAAERP  704

Query  721  SAAEFAKGYVGGTAISKSTEILKTPVLAGLHYEEYQLDKQKDGEIHQKMENAGGVPVGKQ  780
            SAA FAKGYV+G++ISKSTEILK PV+AGLHYEEYQLDKQKDGEIHQK++NAGG PVGKQ
Sbjct  705  SAAAFAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDNAGGAPVGKQ  764

Query  781  IIPKGIADNFEGD  793
            IIP GIADNFEGD
Sbjct  765  IIPTGIADNFEGD  777

3) XOO_0109 in NC_007705


> AB045312|1|G1|9711604|BAB07869.1|Xanthomonas_oryzae_pv._oryzae_MAFF_311018|+|593..2965|hrpF|-|HrpF
Length=790

 Score = 1038 bits (3935),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 777/777 (100%), Positives = 777/777 (100%), Gaps = 0/777 (0%)

Query  1    MSLNMLSTGSNPSQLlgtssnesssselfgsdssndGSDLPSTMDTIFqqiylllaalqa  60
            MSLNMLSTGSNPSQLLGTSSNESSSSELFGSDSSNDGSDLPSTMDTIFQQIYLLLAALQA
Sbjct  1    MSLNMLSTGSNPSQLLGTSSNESSSSELFGSDSSNDGSDLPSTMDTIFQQIYLLLAALQA  60

Query  61   ntqtsasGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPPA  120
            NTQTSASGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPPA
Sbjct  61   NTQTSASGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPPA  120

Query  121  LEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLKQ  180
            LEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLKQ
Sbjct  121  LEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLKQ  180

Query  181  DPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAE  240
            DPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAE
Sbjct  181  DPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAE  240

Query  241  GSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQKD  300
            GSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQKD
Sbjct  241  GSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQKD  300

Query  301  PRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKA  360
            PRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKA
Sbjct  301  PRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKA  360

Query  361  SVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWK  420
            SVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWK
Sbjct  361  SVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWK  420

Query  421  EFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISKD  480
            EFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISKD
Sbjct  421  EFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISKD  480

Query  481  NKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQFYDH  540
            NKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQFYDH
Sbjct  481  NKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQFYDH  540

Query  541  MSAANKTVNTPATHEASSPDQQKAVADMLMGkddppaikkpkkdVGTFQQGLHEFLKWDS  600
            MSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIKKPKKDVGTFQQGLHEFLKWDS
Sbjct  541  MSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIKKPKKDVGTFQQGLHEFLKWDS  600

Query  601  KILDWMSVGLSALNGIPVigeiadaaaialeseaqaaQVVDTAIQGGDMSLALKLAGINM  660
            KILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQVVDTAIQGGDMSLALKLAGINM
Sbjct  601  KILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQVVDTAIQGGDMSLALKLAGINM  660

Query  661  agavvgavggPTARIgakeaaegaakgtakgaakgagktaaeRPSAAAFAKGYVAGSTIS  720
            AGAVVGAVGGPTARIGAKEAAEGAAKGTAKGAAKGAGKTAAERPSAAAFAKGYVAGSTIS
Sbjct  661  AGAVVGAVGGPTARIGAKEAAEGAAKGTAKGAAKGAGKTAAERPSAAAFAKGYVAGSTIS  720

Query  721  KSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDNAGGAPVGKQIIPTGIADNFEGD  777
            KSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDNAGGAPVGKQIIPTGIADNFEGD
Sbjct  721  KSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDNAGGAPVGKQIIPTGIADNFEGD  777

4) hrpF in NC_010717


> AB045312|1|G1|9711604|BAB07869.1|Xanthomonas_oryzae_pv._oryzae_MAFF_311018|+|593..2965|hrpF|-|HrpF
Length=790

 Score = 1028 bits (3897),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 775/789 (99%), Positives = 777/789 (99%), Gaps = 12/789 (1%)

Query  1    MSLNMLSTGSNPSQLlgtssnesssselfgsdssndGSDLPSTMDTIFqqiylllaalqa  60
            MSLNMLSTGSNPSQLLGTSSNESSSSELFGSDSSNDGSDLPSTMDTIFQQIYLLLAALQA
Sbjct  1    MSLNMLSTGSNPSQLLGTSSNESSSSELFGSDSSNDGSDLPSTMDTIFQQIYLLLAALQA  60

Query  61   ntqtsasGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPPA  120
            NTQTSASGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPPA
Sbjct  61   NTQTSASGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPPA  120

Query  121  LEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLKQ  180
            LEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLKQ
Sbjct  121  LEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLKQ  180

Query  181  DPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAE  240
            DPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAE
Sbjct  181  DPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAE  240

Query  241  GSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQKD  300
            GSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQKD
Sbjct  241  GSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQKD  300

Query  301  PRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKA  360
            PRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKA
Sbjct  301  PRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKA  360

Query  361  SVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWK  420
            SVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWK
Sbjct  361  SVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWK  420

Query  421  EFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISKD  480
            EFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISKD
Sbjct  421  EFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISKD  480

Query  481  NKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQFYDH  540
            NKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQFYDH
Sbjct  481  NKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQFYDH  540

Query  541  MSAANKTVNTPATHEASSPDQQKAVADMLMGkddppaikkpkkdVGTFQQGLHEFLKWDS  600
            MSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIKKPKKDVGTFQQGLHEFLKWDS
Sbjct  541  MSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIKKPKKDVGTFQQGLHEFLKWDS  600

Query  601  KILDWMSVGLSALNGIPVigeiadaaaialeseaqaaQVVDTAIQGGDMSLALKLAGINM  660
            KILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQVVDTAIQGGDMSLALKLAGINM
Sbjct  601  KILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQVVDTAIQGGDMSLALKLAGINM  660

Query  661  agavvgavggPTARIgakgaakgvaevaakeaaegaakgtakgsakgagktaaeRPSAAA  720
            AGAVVGAVGGPTARI            +AKEAAEGAAKGTAKG+AKGAGKTAAERPSAAA
Sbjct  661  AGAVVGAVGGPTARI------------GAKEAAEGAAKGTAKGAAKGAGKTAAERPSAAA  708

Query  721  FAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDNAGGAPVGKQIIPT  780
            FAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDNAGGAPVGKQIIPT
Sbjct  709  FAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDNAGGAPVGKQIIPT  768

Query  781  GIADNFEGD  789
            GIADNFEGD
Sbjct  769  GIADNFEGD  777

5) hrpF in NC_006834


> AB045312|1|G1|9711604|BAB07869.1|Xanthomonas_oryzae_pv._oryzae_MAFF_311018|+|593..2965|hrpF|-|HrpF
Length=790

 Score = 1027 bits (3893),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 775/789 (99%), Positives = 777/789 (99%), Gaps = 12/789 (1%)

Query  53   MSLNMLSTGSNPSQLlgtssnesssselfgsdssndGSDLPSTMDTIFqqiylllaalqa  112
            MSLNMLSTGSNPSQLLGTSSNESSSSELFGSDSSNDGSDLPSTMDTIFQQIYLLLAALQA
Sbjct  1    MSLNMLSTGSNPSQLLGTSSNESSSSELFGSDSSNDGSDLPSTMDTIFQQIYLLLAALQA  60

Query  113  ntqtsasGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPPA  172
            NTQTSASGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPPA
Sbjct  61   NTQTSASGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPPA  120

Query  173  LEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLKQ  232
            LEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLKQ
Sbjct  121  LEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLKQ  180

Query  233  DPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAE  292
            DPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAE
Sbjct  181  DPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAE  240

Query  293  GSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQKD  352
            GSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQKD
Sbjct  241  GSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQKD  300

Query  353  PRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKA  412
            PRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKA
Sbjct  301  PRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKA  360

Query  413  SVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWK  472
            SVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWK
Sbjct  361  SVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWK  420

Query  473  EFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISKD  532
            EFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISKD
Sbjct  421  EFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISKD  480

Query  533  NKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQFYDH  592
            NKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQFYDH
Sbjct  481  NKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQFYDH  540

Query  593  MSAANKTVNTPATHEASSPDQQKAVADMLMGkddppaikkpkkdVGTFQQGLHEFLKWDS  652
            MSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIKKPKKDVGTFQQGLHEFLKWDS
Sbjct  541  MSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIKKPKKDVGTFQQGLHEFLKWDS  600

Query  653  KILDWMSVGLSALNGIPVigeiadaaaialeseaqaaQVVDTAIQGGDMSLALKLAGINM  712
            KILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQVVDTAIQGGDMSLALKLAGINM
Sbjct  601  KILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQVVDTAIQGGDMSLALKLAGINM  660

Query  713  agavvgavggPTARIgakgaakgvaevaakeaaegaakgtakgaakgagktaaeRPSAAA  772
            AGAVVGAVGGPTARI            +AKEAAEGAAKGTAKGAAKGAGKTAAERPSAAA
Sbjct  661  AGAVVGAVGGPTARI------------GAKEAAEGAAKGTAKGAAKGAGKTAAERPSAAA  708

Query  773  FAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDNAGGAPVGRQIIPT  832
            FAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDNAGGAPVG+QIIPT
Sbjct  709  FAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDNAGGAPVGKQIIPT  768

Query  833  GIADNFEGD  841
            GIADNFEGD
Sbjct  769  GIADNFEGD  777

6) hrpF in NC_016010


> AB045312|1|G1|9711604|BAB07869.1|Xanthomonas_oryzae_pv._oryzae_MAFF_311018|+|593..2965|hrpF|-|HrpF
Length=790

 Score =  962 bits (3646),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 712/797 (90%), Positives = 756/797 (95%), Gaps = 20/797 (2%)

Query  1    MSLNTLSTGSNPSQllgtsfnessssellgsdsskdgsdlpsTMDDIFLLIYQLLAALQt  60
            MSLN LSTGSNPSQLLGTS NESSSSEL+GSDSS+DGSDLPSTMD IF  IY LLAALQ+
Sbjct  1    MSLNMLSTGSNPSQLLGTSSNESSSSELFGSDSSNDGSDLPSTMDTIFQQIYLLLAALQA  60

Query  61   ntptstssnasadapantpsGDASTPSSASDDQATQPIEKRTSWPSLGYDFDPKHIKGKD  120
            NT TS+S++++A++++    GDA T  SASD QATQPIEKRTSWPSLGYDFDPK+IKGKD
Sbjct  61   NTQTSASGDTPANTAS----GDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKD  116

Query  121  APPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQ  180
            APPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMP+EYKNLDDKINDPSTP+DLKAALQ
Sbjct  117  APPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQ  176

Query  181  GLKQDPRLFFAIGSQGDGKCGGKISAQDLWDFSDSHPQVKELGGKNDEFNPKNIKGSNPP  240
            GLKQDPRLFFAIGSQGDGKCGGK+SAQDLWDFSDSHPQVK+LGGKNDEFNPK+IKGSNPP
Sbjct  177  GLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPP  236

Query  241  PAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALQG  300
             AAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKAL+G
Sbjct  237  QAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKG  296

Query  301  LQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKQAKSYTQNYIASDSPD  360
            LQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDK+AKSYTQNYIASDSPD
Sbjct  297  LQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPD  356

Query  361  KTKASVMTKSDALRELYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQVIAAAQYFRDHP  420
            KTKASVMTKSDALRE+YRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQ+IAAAQYFRDHP
Sbjct  357  KTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHP  416

Query  421  DEWKEFAGDSGSMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKEITRdklda  480
            DEWKEF+GD+G+MSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKE+TRDKLDA
Sbjct  417  DEWKEFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDA  476

Query  481  iakddkadpavkqaaTQLLADPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQDDFRQ  540
            I+KD+KADPAVK+AATQL +DPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQ+DFRQ
Sbjct  477  ISKDNKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQ  536

Query  541  FYDHMSAANKTVDTPATHEASSPDQQKAVADMLVGkddppaikkpkkdVGTFQQGLHEFL  600
            FYDHMSAANKTV+TPATHEASSPDQQKAVADML+GKDDPPAIKKPKKDVGTFQQGLHEFL
Sbjct  537  FYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIKKPKKDVGTFQQGLHEFL  596

Query  601  KWDSKILDWMSVGLSALNGIPIIGEIADAASIALESEAQAAQVVDTAIQGGDMSLALKLA  660
            KWDSKILDWMSVGLSALNGIP+IGEIADAA+IALESEAQAAQVVDTAIQGGDMSLALKLA
Sbjct  597  KWDSKILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQVVDTAIQGGDMSLALKLA  656

Query  661  GINMagavvgavggPTARIGARIgakgvaeaaakgaaegaakgtakgtakgvakgggkta  720
            GINMAGAVVGAVGGPTARIGA+                 AA G+AKGTAKG AKG+GKTA
Sbjct  657  GINMAGAVVGAVGGPTARIGAKE----------------AAEGAAKGTAKGAAKGAGKTA  700

Query  721  aeRPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYQLDKQKDGQIHQKLENAGGVP  780
            AERPSAA FAKGYV+G++ISKS EILK PV+AGLHYEEYQLDKQKDG+IHQKL+NAGG P
Sbjct  701  AERPSAAAFAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDNAGGAP  760

Query  781  VGKQIIPKGIADNFEGD  797
            VGKQIIP GIADNFEGD
Sbjct  761  VGKQIIPTGIADNFEGD  777

7) hrpF in NC_020815


> AB045312|1|G1|9711604|BAB07869.1|Xanthomonas_oryzae_pv._oryzae_MAFF_311018|+|593..2965|hrpF|-|HrpF
Length=790

 Score =  884 bits (3347),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 635/785 (81%), Positives = 716/785 (92%), Gaps = 9/785 (1%)

Query  1    MSLNTLSTGSNPSQLLGTPLNEsdssellgsdsskddsdlpsTMDDIFLLIYQLLAALQT  60
            MSLN LSTGSNPSQLLGT+ NES SSEL+GSDSS+D+SDLPSTMD IF  IY LLAALQ+
Sbjct  1    MSLNMLSTGSNPSQLLGTSSNESSSSELFGSDSSNDGSDLPSTMDTIFQQIYLLLAALQA  60

Query  61   NAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKGKD  120
            N+ TS+SG    D+P++++SGDA T  SASD QA QPIEKRTSWPSLGYDFDPK+IKGKD
Sbjct  61   NTQTSASG----DTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKD  116

Query  121  APPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQ  180
            APPALEGSTVTWN+GTLT SELQIVSTLNAHKDQMP+EYKNLDDKINDPSTP+DLKAALQ
Sbjct  117  APPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQ  176

Query  181  GLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGSTPP  240
            GLKQDPRLFFAIGSQGDGKCGGK+ AQDLWDFSDSHPQVK +GGKND+FNPKDIKGS PP
Sbjct  177  GLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPP  236

Query  241  PAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQC-PLKWSDLDAKINDPSTPPDLKKALTD  299
             A +GS+VTW++G L Q+ELEIVS L+RHKDQ  +L   +LDAKINDPST PDLKKAL +
Sbjct  237  QAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKG  296

Query  300  LQSDPRLFFAIGSQgdgkcggkikdgdlgkFVSHHAQVAEYADKQAKNYTQNYVASDSPD  359
            LQ DPRLFFAIGSQ DGKCGGKIK  DL  F   H+Q+AEY DK+AK+YTQNY+ASDSPD
Sbjct  297  LQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPD  356

Query  360  KTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTKKCPPQVIAAAQYFRDHP  419
            KTKASVM  SDA+RE+YRYSDYLP++L++D F  +VDG+S T KCPPQ+IAAAQYFRDHP
Sbjct  357  KTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHP  416

Query  420  DQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQDAFYGDGKEVTRDKLDS  479
            D+WK ++GD+G+MS PDFLQK++SE+HLTADEQKTLDTINSHQDAFYGDGKE+TRDKLD+
Sbjct  417  DEWKEFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDA  476

Query  480  ISKDDKADPAVKEAATQllndpllfgllnnSITGYKKPHRFFGGGHVVDSGKISQDDFRR  539
            ISKD+KADPAVKEAATQL +DPLLFGLLNNSITGYKKPH+FFGGGHVVDSGKISQ+DFR+
Sbjct  477  ISKDNKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQ  536

Query  540  FYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGkddppaikkpkkdVGVFQEGLHEFL  599
            FYD+MSAANKTV+ P TH+ASS++QQKAV+DMLMGKDDPPAIKKPKKDVG FQ+GLHEFL
Sbjct  537  FYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIKKPKKDVGTFQQGLHEFL  596

Query  600  KWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQVVDTAIQGGDMSLALKLA  659
            KWDSKILDWMSVGLSALNGIP+IGEI+DAA+IALESEAQAAQVVDTAIQGGDMSLALKLA
Sbjct  597  KWDSKILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQVVDTAIQGGDMSLALKLA  656

Query  660  GINMagavvgavggPTARIgakavakgvaeaaakgtakgvakgagrtaaERPSAAEFAKG  719
            GINMAGAVVGAVGGPTARI     AK  AE+AAKGTAKG AKGAG+TAAERPSAA FAKG
Sbjct  657  GINMAGAVVGAVGGPTARI----GAKEAAEGAAKGTAKGAAKGAGKTAAERPSAAAFAKG  712

Query  720  YVGGTAISKSVEILKTPVLAGLHYEEYRLDKQKEGEIHQKMENAGGIPMGKQIVPTNVAN  779
            YV+G++ISKS EILK PV+AGLHYEEY+LDKQK+GEIHQK++NAGG P+GKQI+PT +A+
Sbjct  713  YVAGSTISKSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDNAGGAPVGKQIIPTGIAD  772

Query  780  NFEGD  784
            NFEGD
Sbjct  773  NFEGD  777

8) hrpF in NC_003919


> AB045312|1|G1|9711604|BAB07869.1|Xanthomonas_oryzae_pv._oryzae_MAFF_311018|+|593..2965|hrpF|-|HrpF
Length=790

 Score =  880 bits (3332),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 635/785 (81%), Positives = 716/785 (92%), Gaps = 9/785 (1%)

Query  28   MSLNTLSTGSNPSQLLGTPLNEsdssellgsdsskddsdlpsTMDDIFLLIYQLLAALQT  87
            MSLN LSTGSNPSQLLGT+ NES SSEL+GSDSS+D+SDLPSTMD IF  IY LLAALQ+
Sbjct  1    MSLNMLSTGSNPSQLLGTSSNESSSSELFGSDSSNDGSDLPSTMDTIFQQIYLLLAALQA  60

Query  88   NAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKGKD  147
            N+ TS+SG    D+P++++SGDA T  SASD QA QPIEKRTSWPSLGYDFDPK+IKGKD
Sbjct  61   NTQTSASG----DTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKD  116

Query  148  APPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQ  207
            APPALEGSTVTWN+GTLT SELQIVSTLNAHKDQMP+EYKNLDDKINDPSTP+DLKAALQ
Sbjct  117  APPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQ  176

Query  208  GLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGSTPP  267
            GLKQDPRLFFAIGSQGDGKCGGK+ AQDLWDFSDSHPQVK +GGKND+FNPKDIKGS PP
Sbjct  177  GLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPP  236

Query  268  PAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQC-PLKWSDLDAKINDPSTPPDLKKALTD  326
             A +GS+VTW++G L Q+ELEIVS L+RHKDQ  +L   +LDAKINDPST PDLKKAL +
Sbjct  237  QAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKG  296

Query  327  LQSDPRLFFAIGSQgdgkcggkikdgdlgkFVSHHAQVAEYADKQAKNYTQNYVASDSPD  386
            LQ DPRLFFAIGSQ DGKCGGKIK  DL  F   H+Q+AEY DK+AK+YTQNY+ASDSPD
Sbjct  297  LQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPD  356

Query  387  KTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTKKCPPQVIAAAQYFRDHP  446
            KTKASVM  SDA+RE+YRYSDYLP++L++D F  +VDG+S T KCPPQ+IAAAQYFRDHP
Sbjct  357  KTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHP  416

Query  447  DQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQDAFYGDGKEVTRDKLDS  506
            D+WK ++GD+G+MS PDFLQK++SE+HLTADEQKTLDTINSHQDAFYGDGKE+TRDKLD+
Sbjct  417  DEWKEFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDA  476

Query  507  ISKDDKADPAVKEAATQllndpllfgllnnSITGYKKPHRFFGGGHVVDSGKISQDDFRR  566
            ISKD+KADPAVKEAATQL +DPLLFGLLNNSITGYKKPH+FFGGGHVVDSGKISQ+DFR+
Sbjct  477  ISKDNKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQ  536

Query  567  FYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGkddppaikkpkkdVGVFQEGLHEFL  626
            FYD+MSAANKTV+ P TH+ASS++QQKAV+DMLMGKDDPPAIKKPKKDVG FQ+GLHEFL
Sbjct  537  FYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIKKPKKDVGTFQQGLHEFL  596

Query  627  KWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQVVDTAIQGGDMSLALKLA  686
            KWDSKILDWMSVGLSALNGIP+IGEI+DAA+IALESEAQAAQVVDTAIQGGDMSLALKLA
Sbjct  597  KWDSKILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQVVDTAIQGGDMSLALKLA  656

Query  687  GINMagavvgavggPTARIgakavakgvaeaaakgtakgvakgagrtaaERPSAAEFAKG  746
            GINMAGAVVGAVGGPTARI     AK  AE+AAKGTAKG AKGAG+TAAERPSAA FAKG
Sbjct  657  GINMAGAVVGAVGGPTARI----GAKEAAEGAAKGTAKGAAKGAGKTAAERPSAAAFAKG  712

Query  747  YVGGTAISKSVEILKTPVLAGLHYEEYRLDKQKEGEIHQKMENAGGIPMGKQIVPTNVAN  806
            YV+G++ISKS EILK PV+AGLHYEEY+LDKQK+GEIHQK++NAGG P+GKQI+PT +A+
Sbjct  713  YVAGSTISKSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDNAGGAPVGKQIIPTGIAD  772

Query  807  NFEGD  811
            NFEGD
Sbjct  773  NFEGD  777

9) XAC29_02025 in NC_020800


> AB045312|1|G1|9711604|BAB07869.1|Xanthomonas_oryzae_pv._oryzae_MAFF_311018|+|593..2965|hrpF|-|HrpF
Length=790

 Score =  867 bits (3282),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 598/742 (81%), Positives = 676/742 (92%), Gaps = 9/742 (1%)

Query  1    MDDIFLLIYQLLAALQTNAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTS  60
            MD IF  IY LLAALQ+N+ TS+SG    D+P++++SGDA T  SASD QA QPIEKRTS
Sbjct  44   MDTIFQQIYLLLAALQANTQTSASG----DTPANTASGDADTQMSASDWQATQPIEKRTS  99

Query  61   WPSLGYDFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLD  120
            WPSLGYDFDPK+IKGKDAPPALEGSTVTWN+GTLT SELQIVSTLNAHKDQMP+EYKNLD
Sbjct  100  WPSLGYDFDPKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLD  159

Query  121  DKINDPSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMG  180
            DKINDPSTP+DLKAALQGLKQDPRLFFAIGSQGDGKCGGK+ AQDLWDFSDSHPQVK +G
Sbjct  160  DKINDPSTPPDLKAALQGLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLG  219

Query  181  GKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQC-PLKWSDLDA  239
            GKND+FNPKDIKGS PP A +GS+VTW++G L Q+ELEIVS L+RHKDQ  +L   +LDA
Sbjct  220  GKNDEFNPKDIKGSNPPQAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDA  279

Query  240  KINDPSTPPDLKKALTDLQSDPRLFFAIGSQgdgkcggkikdgdlgkFVSHHAQVAEYAD  299
            KINDPST PDLKKAL +LQ DPRLFFAIGSQ DGKCGGKIK  DL  F   H+Q+AEY D
Sbjct  280  KINDPSTQPDLKKALKGLQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYND  339

Query  300  KQAKNYTQNYVASDSPDKTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTK  359
            K+AK+YTQNY+ASDSPDKTKASVM  SDA+RE+YRYSDYLP++L++D F  +VDG+S T 
Sbjct  340  KKAKSYTQNYIASDSPDKTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTG  399

Query  360  KCPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQ  419
            KCPPQ+IAAAQYFRDHPD+WK ++GD+G+MS PDFLQK++SE+HLTADEQKTLDTINSHQ
Sbjct  400  KCPPQLIAAAQYFRDHPDEWKEFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQ  459

Query  420  DAFYGDGKEVTRDKLDSISKDDKADPAVKEAATQllndpllfgllnnSITGYKKPHRFFG  479
            DAFYGDGKE+TRDKLD+ISKD+KADPAVKEAATQL +DPLLFGLLNNSITGYKKPH+FFG
Sbjct  460  DAFYGDGKELTRDKLDAISKDNKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFG  519

Query  480  GGHVVDSGKISKDDFRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGkddppaik  539
            GGHVVDSGKIS++DFR+FYD+MSAANKTV+ P TH+ASS++QQKAV+DMLMGKDDPPAIK
Sbjct  520  GGHVVDSGKISQNDFRQFYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIK  579

Query  540  kpkkdVGVFQEGLHEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQV  599
            KPKKDVG FQ+GLHEFLKWDSKILDWMSVGLSALNGIP+IGEI+DAA+IALESEAQAAQV
Sbjct  580  KPKKDVGTFQQGLHEFLKWDSKILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQV  639

Query  600  VDTAIQGGDMSLALKLAGINMagavvgavggPTARIgakavakgvaeaaakgtakgvakg  659
            VDTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARI     AK  AE+AAKGTAKG AKG
Sbjct  640  VDTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARI----GAKEAAEGAAKGTAKGAAKG  695

Query  660  agrtaaERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQKEGEIHQKMEN  719
            AG+TAAERPSAA FAKGYV+G++ISKS EILK PV+AGLHYEEY+LDKQK+GEIHQK++N
Sbjct  696  AGKTAAERPSAAAFAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDN  755

Query  720  AGGIPMGKQIVPTNVANNFEGD  741
            AGG P+GKQI+PT +A+NFEGD
Sbjct  756  AGGAPVGKQIIPTGIADNFEGD  777

10) hrpF in NC_010688


> AB045312|1|G1|9711604|BAB07869.1|Xanthomonas_oryzae_pv._oryzae_MAFF_311018|+|593..2965|hrpF|-|HrpF
Length=790

 Score =  668 bits (2527),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 461/705 (66%), Positives = 593/705 (85%), Gaps = 21/705 (2%)

Query  218  EFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDP  277
            +F+PKNIKG  +PPA EGS+VTW++GTLT+S+L+IVSTLN H+D MPIE+ +LD+KINDP
Sbjct  106  DFDPKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDP  165

Query  278  ATPPDLKKALQGLQQDPGLFFAMASqghgkhhhddqgkCNGKLIADNLYDFADRHPQVTA  337
            +TPPDLK ALQGL+QDP LFFA++SQG+GK        C GK+ A++L DF+D HPQV  
Sbjct  166  STPPDLKAALQGLKQDPRLFFAIGSQGDGK--------CGGKVSAQDLWDFSDSHPQVKD  217

Query  338  QGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKC-PVKWTDL  396
             GGKN  +NP  +KG + P + +GS+VTW++G L Q+ELEIV+ L+RHKD+  ++   +L
Sbjct  218  LGGKNDEFNPKDIKGSNPPQAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQL  277

Query  397  DAKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQI  456
            DAK +DP+  PDL+KA+ +LQ+DP LF AIG+Q   G C+GK+  +DLT FS    H+QI
Sbjct  278  DAKINDPSTQPDLKKALKGLQKDPRLFFAIGSQ-KDGKCGGKIKAQDLTDFSY--YHPQI  334

Query  457  AQYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEG  516
            A+Y +++AK+YTQNY+ASDSPDKT ++VMT SDA+RE+YRYSDYLP +L++D F ++V+G
Sbjct  335  AEYNDKKAKSYTQNYIASDSPDKTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDG  394

Query  517  DSTTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDT  576
            DS T K PPQ+IAAAQYFR+HPD+WK ++GD  +MST+DFLQKSTSEMHLTA E KTLDT
Sbjct  395  DSKTGKCPPQLIAAAQYFRDHPDEWKEFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDT  454

Query  577  INSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQllgdpllfgllNNAITGYKKP  636
            INSHQ+AF+GDGKE+TRDKLD+I KD+KADPAV++AA QL +DPLLFGLLNN+ITGYKKP
Sbjct  455  INSHQDAFYGDGKELTRDKLDAISKDNKADPAVKEAATQLASDPLLFGLLNNSITGYKKP  514

Query  637  HSFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKAD  696
            H FFGGGHVVDSGKIS++DF+QFY+HM+A NKT++TP+TH A+SP+Q+KAVADMLMGK D
Sbjct  515  HHFFGGGHVVDSGKISQNDFRQFYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGKDD  574

Query  697  QPEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGevadaaalafesea  756
             P IK+ K DVGTF +GLHEFLKWDSKILD +SV+LSA+NGIP+IGE+ADAAA+A+ESEA
Sbjct  575  PPAIKKPKKDVGTFQQGLHEFLKWDSKILDWMSVGLSALNGIPVIGEIADAAAIALESEA  634

Query  757  qaaQVIDTALQGGNLSLAWKLAGINMagavvgavggPTARLaakgaakgvaegaakgatq  816
            QAAQV+DTA+QGG++SLA KLAGINMAGAVVGAVGGPTAR+         A  AA GA++
Sbjct  635  QAAQVVDTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARI--------GAKEAAEGAAK  686

Query  817  gttkgaakgggkgVAEREKPLDIAKGYIIGTTINRPTEMLKTPVLAGLHYEEVRLDKEKK  876
            GT+KGAAKG+GK  AER  +  +AKGY+ G+TI+++TE+LK PV+AGLHYEE +LDK+ K
Sbjct  687  GTAKGAAKGAGKTAAERPSAAAFAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLDKQ-K  745

Query  877  KGEIRKNLEAAGGVPLGKQFIPKAIADNFEADTKENLRHVRGRRK  921
             GEI+++L+ AGG P+GKQ+IP +IADNFE+D ++NLR+VR RR+
Sbjct  746  DGEIHQKLDNAGGAPVGKQIIPTGIADNFEGDVRQNLRNVRIRRR  790


 Score =  313 bits (1172),  Expect = 3e-86, Method: Compositional matrix adjust.
 Identities = 215/411 (53%), Positives = 300/411 (73%), Gaps = 30/411 (7%)

Query  1    MSLNTLSTGSTAGLFL-PLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAATY  59
            MSLN LSTGS ++ +L   ++++SS+ L+GSDS+ ++SDL  +MD +F QQIY L+AA  
Sbjct  1    MSLNMLSTGSNPSQLLGTSSNESSSSELFGSDSSNDGSDLPSTMDTIF-QQIYLLLAALQ  59

Query  60   GNTSLNGPGSGIPGLDTPSAD------DLQASQPIEKRTSWPTLSAPFNAKDIKGSRLPP  113
            +NT  +++G   +   +  AD      D QA+QPIEKRTSWP+L+  F++K+IKG   PP
Sbjct  60   ANTQTSASGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPP  119

Query  114  AVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQ  173
            A++GS+VTW++GTLT SELQIVSTLN HKD+ P+E+ +LDDKINDPSTPPDLK+ALQGL+
Sbjct  120  ALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLK  179

Query  174  KDPRLFFAIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAA  233
            +DPRLFFAIGSQGDGKCGGK+ A DLWDF+D H QV  LGGKN EFNPK+IKG+ PP AA
Sbjct  180  QDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAA  239

Query  234  EGSSVTWDGGTLTQSQLEIVSTLNQHRDMM-PIEFAKLDEKINDPATPPDLKKALQGLQQ  292
            EGS+VTW++G L QS+LEIVS L++H+D + ++ F +LD KINDP+T PDLKKAL+GLQ+
Sbjct  240  EGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQK  299

Query  293  DPGLFFAMASqghgkhhhddqgkCNGKLIADNLYDFADRHPQVTAQGGKNA-TY------  345
            DP LFFA++S        + +GKC GK+ A++L DF+  HPQ++   +K+A +Y      
Sbjct  300  DPRLFFAIGS--------QKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIA  351

Query  346  --NPEKMKGRDLPPPVDGSSVTWDG----GTLTQNELEIVATLNRHKDKCP  390
              +P+K K+  +  +     + + +    G L+++E+  +   +   +KCP
Sbjct  352  SDSPDKTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCP  402

11) XC_3025 in NC_007086


> AB045312|1|G1|9711604|BAB07869.1|Xanthomonas_oryzae_pv._oryzae_MAFF_311018|+|593..2965|hrpF|-|HrpF
Length=790

 Score =  667 bits (2522),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 460/705 (66%), Positives = 593/705 (85%), Gaps = 21/705 (2%)

Query  218  EFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDP  277
            +F+PKNIKG  +PPA EGS+VTW++GTLT+S+L+IVSTLN H+D MPIE+ +LD+KINDP
Sbjct  106  DFDPKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDP  165

Query  278  ATPPDLKKALQGLQQDPGLFFAMASqghgkhhhddqgkCNGKLIADNLYDFADRHPQVTA  337
            +TPPDLK ALQGL+QDP LFFA++SQG+GK        C GK+ A++L DF+D HPQV  
Sbjct  166  STPPDLKAALQGLKQDPRLFFAIGSQGDGK--------CGGKVSAQDLWDFSDSHPQVKD  217

Query  338  QGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKC-PVKWTDL  396
             GGKN  +NP  +KG + P + +GS+VTW++G L Q+ELEIV+ L+RHKD+  ++   +L
Sbjct  218  LGGKNDEFNPKDIKGSNPPQAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQL  277

Query  397  DAKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQI  456
            DAK +DP+  PDL+KA+ +LQ+DP LF AIG+Q   G C+GK+  +DLT FS    H+QI
Sbjct  278  DAKINDPSTQPDLKKALKGLQKDPRLFFAIGSQ-KDGKCGGKIKAQDLTDFSY--YHPQI  334

Query  457  AQYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEG  516
            A+Y +++AK+YTQNY+ASDSPDKT ++VMT SDA+RE+YRYSDYLP +L++D F ++V+G
Sbjct  335  AEYNDKKAKSYTQNYIASDSPDKTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDG  394

Query  517  DSTTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDT  576
            DS T K PPQ+IAAAQYFR+HPD+WK ++GD  +MST+DFLQKSTSEMHLTA E KTLDT
Sbjct  395  DSKTGKCPPQLIAAAQYFRDHPDEWKEFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDT  454

Query  577  INSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQllgdpllfgllNNAITGYKKP  636
            INSHQ+AF+GDGKE+TRDKLD+I KD+KADPAV++AA QL +DPLLFGLLNN+ITGYKKP
Sbjct  455  INSHQDAFYGDGKELTRDKLDAISKDNKADPAVKEAATQLASDPLLFGLLNNSITGYKKP  514

Query  637  HSFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKAD  696
            H FFGGGHVVDSGKIS++DF+QFY+HM+A NKT++TP+TH A+SP+Q+KAVADMLMGK D
Sbjct  515  HHFFGGGHVVDSGKISQNDFRQFYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGKDD  574

Query  697  QPEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGevadaaalafesea  756
             P IK+ K DVGTF +GLHEFLKWDSKILD +SV+LSA+NGIP+IGE+ADAAA+A+ESEA
Sbjct  575  PPAIKKPKKDVGTFQQGLHEFLKWDSKILDWMSVGLSALNGIPVIGEIADAAAIALESEA  634

Query  757  qaaQVIDTALQGGNLSLAWKLAGINMagavvgavggPTARLaakgaakgvaegaakgatq  816
            QAAQV+DTA+QGG++SLA KLAGINMAGAVVGAVGGPTAR+         A  AA GA++
Sbjct  635  QAAQVVDTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARI--------GAKEAAEGAAK  686

Query  817  gttkgaakgggkgVAEREKPLDIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKK  876
            GT+KGAAKG+GK  AER  +  +AKGY+ G++I+++TE+LK PV+AGLHYEE +LDK+ K
Sbjct  687  GTAKGAAKGAGKTAAERPSAAAFAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLDKQ-K  745

Query  877  KGEIRKNLEAAGGVPLGKQFIPKAIADNFEADTKENLRHVRGRRK  921
             GEI+++L+ AGG P+GKQ+IP +IADNFE+D ++NLR+VR RR+
Sbjct  746  DGEIHQKLDNAGGAPVGKQIIPTGIADNFEGDVRQNLRNVRIRRR  790


 Score =  312 bits (1168),  Expect = 7e-86, Method: Compositional matrix adjust.
 Identities = 215/411 (53%), Positives = 299/411 (73%), Gaps = 30/411 (7%)

Query  1    MSLNTLSTGSTAGLFL-PLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAATY  59
            MSLN LSTGS ++ +L   ++++SS+ L+GSDS+ ++SDL  +MD +F QQIY L+AA  
Sbjct  1    MSLNMLSTGSNPSQLLGTSSNESSSSELFGSDSSNDGSDLPSTMDTIF-QQIYLLLAALQ  59

Query  60   GNTSLNGPGSGIPGLDTPSAD------DLQASQPIEKRTSWPTLSAPFNVKDIKGSRLPP  113
            +NT  +++G   +   +  AD      D QA+QPIEKRTSWP+L+  F+ K+IKG   PP
Sbjct  60   ANTQTSASGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPP  119

Query  114  AVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQ  173
            A++GS+VTW++GTLT SELQIVSTLN HKD+ P+E+ +LDDKINDPSTPPDLK+ALQGL+
Sbjct  120  ALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLK  179

Query  174  KDPRLFFAIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAA  233
            +DPRLFFAIGSQGDGKCGGK+ A DLWDF+D H QV  LGGKN EFNPK+IKG+ PP AA
Sbjct  180  QDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAA  239

Query  234  EGSSVTWDGGTLTQSQLEIVSTLNQHRDMM-PIEFAKLDEKINDPATPPDLKKALQGLQQ  292
            EGS+VTW++G L QS+LEIVS L++H+D + ++ F +LD KINDP+T PDLKKAL+GLQ+
Sbjct  240  EGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQK  299

Query  293  DPGLFFAMASqghgkhhhddqgkCNGKLIADNLYDFADRHPQVTAQGGKNA-TY------  345
            DP LFFA++S        + +GKC GK+ A++L DF+  HPQ++   +K+A +Y      
Sbjct  300  DPRLFFAIGS--------QKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIA  351

Query  346  --NPEKMKGRDLPPPVDGSSVTWDG----GTLTQNELEIVATLNRHKDKCP  390
              +P+K K+  +  +     + + +    G L+++E+  +   +   +KCP
Sbjct  352  SDSPDKTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCP  402

12) hrpF in NC_003902


> AB045312|1|G1|9711604|BAB07869.1|Xanthomonas_oryzae_pv._oryzae_MAFF_311018|+|593..2965|hrpF|-|HrpF
Length=790

 Score =  667 bits (2522),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 460/705 (66%), Positives = 593/705 (85%), Gaps = 21/705 (2%)

Query  218  EFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDP  277
            +F+PKNIKG  +PPA EGS+VTW++GTLT+S+L+IVSTLN H+D MPIE+ +LD+KINDP
Sbjct  106  DFDPKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDP  165

Query  278  ATPPDLKKALQGLQQDPGLFFAMASqghgkhhhddqgkCNGKLIADNLYDFADRHPQVTA  337
            +TPPDLK ALQGL+QDP LFFA++SQG+GK        C GK+ A++L DF+D HPQV  
Sbjct  166  STPPDLKAALQGLKQDPRLFFAIGSQGDGK--------CGGKVSAQDLWDFSDSHPQVKD  217

Query  338  QGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKC-PVKWTDL  396
             GGKN  +NP  +KG + P + +GS+VTW++G L Q+ELEIV+ L+RHKD+  ++   +L
Sbjct  218  LGGKNDEFNPKDIKGSNPPQAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQL  277

Query  397  DAKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQI  456
            DAK +DP+  PDL+KA+ +LQ+DP LF AIG+Q   G C+GK+  +DLT FS    H+QI
Sbjct  278  DAKINDPSTQPDLKKALKGLQKDPRLFFAIGSQ-KDGKCGGKIKAQDLTDFSY--YHPQI  334

Query  457  AQYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEG  516
            A+Y +++AK+YTQNY+ASDSPDKT ++VMT SDA+RE+YRYSDYLP +L++D F ++V+G
Sbjct  335  AEYNDKKAKSYTQNYIASDSPDKTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDG  394

Query  517  DSTTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDT  576
            DS T K PPQ+IAAAQYFR+HPD+WK ++GD  +MST+DFLQKSTSEMHLTA E KTLDT
Sbjct  395  DSKTGKCPPQLIAAAQYFRDHPDEWKEFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDT  454

Query  577  INSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQllgdpllfgllNNAITGYKKP  636
            INSHQ+AF+GDGKE+TRDKLD+I KD+KADPAV++AA QL +DPLLFGLLNN+ITGYKKP
Sbjct  455  INSHQDAFYGDGKELTRDKLDAISKDNKADPAVKEAATQLASDPLLFGLLNNSITGYKKP  514

Query  637  HSFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKAD  696
            H FFGGGHVVDSGKIS++DF+QFY+HM+A NKT++TP+TH A+SP+Q+KAVADMLMGK D
Sbjct  515  HHFFGGGHVVDSGKISQNDFRQFYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGKDD  574

Query  697  QPEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGevadaaalafesea  756
             P IK+ K DVGTF +GLHEFLKWDSKILD +SV+LSA+NGIP+IGE+ADAAA+A+ESEA
Sbjct  575  PPAIKKPKKDVGTFQQGLHEFLKWDSKILDWMSVGLSALNGIPVIGEIADAAAIALESEA  634

Query  757  qaaQVIDTALQGGNLSLAWKLAGINMagavvgavggPTARLaakgaakgvaegaakgatq  816
            QAAQV+DTA+QGG++SLA KLAGINMAGAVVGAVGGPTAR+         A  AA GA++
Sbjct  635  QAAQVVDTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARI--------GAKEAAEGAAK  686

Query  817  gttkgaakgggkgVAEREKPLDIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKK  876
            GT+KGAAKG+GK  AER  +  +AKGY+ G++I+++TE+LK PV+AGLHYEE +LDK+ K
Sbjct  687  GTAKGAAKGAGKTAAERPSAAAFAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLDKQ-K  745

Query  877  KGEIRKNLEAAGGVPLGKQFIPKAIADNFEADTKENLRHVRGRRK  921
             GEI+++L+ AGG P+GKQ+IP +IADNFE+D ++NLR+VR RR+
Sbjct  746  DGEIHQKLDNAGGAPVGKQIIPTGIADNFEGDVRQNLRNVRIRRR  790


 Score =  312 bits (1168),  Expect = 7e-86, Method: Compositional matrix adjust.
 Identities = 215/411 (53%), Positives = 299/411 (73%), Gaps = 30/411 (7%)

Query  1    MSLNTLSTGSTAGLFL-PLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAATY  59
            MSLN LSTGS ++ +L   ++++SS+ L+GSDS+ ++SDL  +MD +F QQIY L+AA  
Sbjct  1    MSLNMLSTGSNPSQLLGTSSNESSSSELFGSDSSNDGSDLPSTMDTIF-QQIYLLLAALQ  59

Query  60   GNTSLNGPGSGIPGLDTPSAD------DLQASQPIEKRTSWPTLSAPFNVKDIKGSRLPP  113
            +NT  +++G   +   +  AD      D QA+QPIEKRTSWP+L+  F+ K+IKG   PP
Sbjct  60   ANTQTSASGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKDAPP  119

Query  114  AVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSALQGLQ  173
            A++GS+VTW++GTLT SELQIVSTLN HKD+ P+E+ +LDDKINDPSTPPDLK+ALQGL+
Sbjct  120  ALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLK  179

Query  174  KDPRLFFAIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGATPPPAA  233
            +DPRLFFAIGSQGDGKCGGK+ A DLWDF+D H QV  LGGKN EFNPK+IKG+ PP AA
Sbjct  180  QDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAA  239

Query  234  EGSSVTWDGGTLTQSQLEIVSTLNQHRDMM-PIEFAKLDEKINDPATPPDLKKALQGLQQ  292
            EGS+VTW++G L QS+LEIVS L++H+D + ++ F +LD KINDP+T PDLKKAL+GLQ+
Sbjct  240  EGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKGLQK  299

Query  293  DPGLFFAMASqghgkhhhddqgkCNGKLIADNLYDFADRHPQVTAQGGKNA-TY------  345
            DP LFFA++S        + +GKC GK+ A++L DF+  HPQ++   +K+A +Y      
Sbjct  300  DPRLFFAIGS--------QKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIA  351

Query  346  --NPEKMKGRDLPPPVDGSSVTWDG----GTLTQNELEIVATLNRHKDKCP  390
              +P+K K+  +  +     + + +    G L+++E+  +   +   +KCP
Sbjct  352  SDSPDKTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCP  402

13) XCR_1459 in NC_017271


> AB045312|1|G1|9711604|BAB07869.1|Xanthomonas_oryzae_pv._oryzae_MAFF_311018|+|593..2965|hrpF|-|HrpF
Length=790

 Score =  664 bits (2510),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 459/705 (66%), Positives = 592/705 (84%), Gaps = 21/705 (2%)

Query  185  EFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDP  244
            +F+PKNIKG  +PPA EGS+VTW++GTLT+S+L+IVSTLN H+D MPIE+ +LD+KINDP
Sbjct  106  DFDPKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDP  165

Query  245  ATPPDLKKALQGLQQDPGLFFAMASqghgkhhhddqgkCNGKLIADNLYDFADRHPQVTA  304
            +TPPDLK ALQGL+QDP LFFA++SQG+GK        C GK+ A++L DF+D HPQV  
Sbjct  166  STPPDLKAALQGLKQDPRLFFAIGSQGDGK--------CGGKVSAQDLWDFSDSHPQVKD  217

Query  305  QGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKC-PVKWTDL  363
             GGKN  +NP  +KG + P + +GS+VTW++G L Q+ELEIV+ L+RHKD+  ++   +L
Sbjct  218  LGGKNDEFNPKDIKGSNPPQAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQL  277

Query  364  DAKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQI  423
            DAK +DP+  PDL+KA+ +LQ+DP LF AIG+Q   G C+GK+  +DLT FS    H+QI
Sbjct  278  DAKINDPSTQPDLKKALKGLQKDPRLFFAIGSQ-KDGKCGGKIKAQDLTDFSY--YHPQI  334

Query  424  AQYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEG  483
            A+Y +++AK+YTQNY+ASDSPDKT ++VMT SDA+RE+YRYSDYLP +L++D F ++V+G
Sbjct  335  AEYNDKKAKSYTQNYIASDSPDKTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDG  394

Query  484  DSTTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTVPELKTLDT  543
            DS T K PPQ+IAAAQYFR+HPD+WK ++GD  +MST+DFLQKSTSEMHLT  E KTLDT
Sbjct  395  DSKTGKCPPQLIAAAQYFRDHPDEWKEFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDT  454

Query  544  INSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQllgdpllfgllNNAITGYKKP  603
            INSHQ+AF+GDGKE+TRDKLD+I KD+KADPAV++AA QL +DPLLFGLLNN+ITGYKKP
Sbjct  455  INSHQDAFYGDGKELTRDKLDAISKDNKADPAVKEAATQLASDPLLFGLLNNSITGYKKP  514

Query  604  HSFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKAD  663
            H FFGGGHVVDSGKIS++DF+QFY+HM+A NKT++TP+TH A+SP+Q+KAVADMLMGK D
Sbjct  515  HHFFGGGHVVDSGKISQNDFRQFYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGKDD  574

Query  664  QPEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGefadaaalafesea  723
             P IK+ K DVGTF +GLHEFLKWDSKILD +SV+LSA+NGIP+IGE+ADAAA+A+ESEA
Sbjct  575  PPAIKKPKKDVGTFQQGLHEFLKWDSKILDWMSVGLSALNGIPVIGEIADAAAIALESEA  634

Query  724  qaaqVIDTALQGGNLSLAWKLAGINMagavvgavggPTARLaakgaakgvaegaakgatq  783
            QAAQV+DTA+QGG++SLA KLAGINMAGAVVGAVGGPTAR+         A  AA GA++
Sbjct  635  QAAQVVDTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARI--------GAKEAAEGAAK  686

Query  784  gttkgaakgggkgVAEREKPRDIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKERK  843
            GT+KGAAKG+GK  AER  +  +AKGY+ G++I+++TE+LK PV+AGLHYEE +LDK+ K
Sbjct  687  GTAKGAAKGAGKTAAERPSAAAFAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLDKQ-K  745

Query  844  KGEIRKNLEAAGGVPLGKQFIPRAIADNFEADTKENLRHVRGRRK  888
             GEI+++L+ AGG P+GKQ+IP +IADNFE+D ++NLR+VR RR+
Sbjct  746  DGEIHQKLDNAGGAPVGKQIIPTGIADNFEGDVRQNLRNVRIRRR  790


 Score =  303 bits (1136),  Expect = 3e-83, Method: Compositional matrix adjust.
 Identities = 204/417 (49%), Positives = 290/417 (70%), Gaps = 43/417 (10%)

Query  2    NDSDLLLAMDNLFLQQIYLLIAATYGNTSLNGPGSGIPGLDTPSAD------DLQASQPI  55
            ++SDL  +MD +F QQIYLL+AA  +NT  +++G   +   +  AD      D QA+QPI
Sbjct  36   DGSDLPSTMDTIF-QQIYLLLAALQANTQTSASGDTPANTASGDADTQMSASDWQATQPI  94

Query  56   EKRTSWPTLSAPFNAKDIKGSRLPPAVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLE  115
            EKRTSWP+L+  F++K+IKG   PPA++GS+VTW++GTLT SELQIVSTLN HKD+ P+E
Sbjct  95   EKRTSWPSLGYDFDPKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIE  154

Query  116  FAKLDDKINDPSTPPDLKSALQGLQKDPRLFFAIGSQGDGKCGGKIKAGDLWDFADHHQQ  175
            + +LDDKINDPSTPPDLK+ALQGL++DPRLFFAIGSQGDGKCGGK+ A DLWDF+D H Q
Sbjct  155  YKNLDDKINDPSTPPDLKAALQGLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQ  214

Query  176  VTALGGKNAEFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMM-PIEF  234
            V  LGGKN EFNPK+IKG+ PP AAEGS+VTW++G L QS+LEIVS L++H+D + ++ F
Sbjct  215  VKDLGGKNDEFNPKDIKGSNPPQAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSF  274

Query  235  AKLDEKINDPATPPDLKKALQGLQQDPGLFFAMASqghgkhhhddqgkCNGKLIADNLYD  294
             +LD KINDP+T PDLKKAL+GLQ+DP LFFA++S        + +GKC GK+ A++L D
Sbjct  275  DQLDAKINDPSTQPDLKKALKGLQKDPRLFFAIGS--------QKDGKCGGKIKAQDLTD  326

Query  295  FADRHPQVTAQGGKNA-TY--------NPEKMKGRDLPPPVDGSSVTWDG----GTLTQN  341
            F+  HPQ++   +K+A +Y        +P+K K+  +  +     + + +    G L+++
Sbjct  327  FSYYHPQIAEYNDKKAKSYTQNYIASDSPDKTKASVMTKSDALREMYRYSDYLPGNLSED  386

Query  342  ELEIVATLNRHKDKCPVK--------------WTDLDAKSKDPAIPPDLQKAFADLQ  384
            E+  +   +   +KCP +              W ++ + +   + P  LQK+ ++++
Sbjct  387  EFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWKEFSGDAGTMSTPDFLQKSTSEMH  443

14) popF2 in NC_017575


> AB045312|1|G1|9711604|BAB07869.1|Xanthomonas_oryzae_pv._oryzae_MAFF_311018|+|593..2965|hrpF|-|HrpF
Length=790

 Score =  404 bits (1519),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 276/565 (49%), Positives = 394/565 (70%), Gaps = 36/565 (6%)

Query  160  SAPPV--GSDVTWNGGTLNDTQLQIIGILNLHKDQGDISWDSIQDKINDPNTPPDLKWAL  217
             APP   GS VTWN+GTL  ++LQI++ LN HKDQ  I   +++DKINDP+TPPDLK AL
Sbjct  116  DAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAAL  175

Query  218  QALSQDFNLFQAIGSQGDGRFGGKIKGKDLAEFAKGHPQV--------------------  257
            Q+L QD  LF AIGSQGDG+ GGK+ ++DL +F+ +HPQV                    
Sbjct  176  QGLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNP  235

Query  258  --------LTWNSGTLNNSQLEIMSVLARHKDKL-PIEWKSIQDKANDPSLPPDLRAALQ  308
                    +TWN G LN+S+LEI+SVL RHKD++ ++    ++ K NDPS  PDL+ AL+
Sbjct  236  PQAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALK  295

Query  309  ALANDPALFFAIGSQGDGKCGGKIKAGDVSKFADNHPQVIEYNRKKAEGYVKDYIPSDAK  368
            +L +DP LFFAIGSQ DGKCGGKIKA D++ F+  HPQ+ EYN KKA +Y ++YI+SD+ 
Sbjct  296  GLQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSP  355

Query  369  PGDKPSAMTQNDALRELYRYSDYLPKKLDMDALQHIVDGDSNAKKTPPQVIAAAQYFLQN  428
               K+S MT++DALRE+YRYSDYLP +L  D +  IVDGDS++ K PPQ+IAAAQYF ++
Sbjct  356  DKTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDH  415

Query  429  RNEWASLNKLGDNPDKKVGKADFLQRAASAVHLTKEDLKTVSTINDNLDVFFKDGQKITR  488
             +EW  ++  GD     ++ +DFLQ+++S +HLT ++ KT+ TIN + D F+ DG+ +TR
Sbjct  416  PDEWKEFS--GDAG--TMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTR  471

Query  489  DRLAAMSEDESLSSGVRDAAKQLLQDPLLYGLINNANSGYKTKNGFFSFGGPTVDSGVIG  548
            D+L A+S D+   ++V++AA QL  DPLL+GL+NN+ +GYK  + FF+ GG  VDSG I+
Sbjct  472  DKLDAISKDNKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFG-GGHVVDSGKIS  530

Query  549  KKDFEKFMSSMTDANKTVQERKTHDAKSEASQSAVSDMGMGMEDQPDIKAVKKSGGALKK  608
            ++DF +F   M+ ANKTV+   TH+A S   Q AV+DM MG +D P IK  KK  G++++
Sbjct  531  QNDFRQFYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIKKPKKDVGTFQQ  590

Query  609  VMDKVLTIYAKVMDIASQVVGALGVIPGLGEIADALSIGMAAGASAAKVLSTLLDGGNLK  668
             ++  L   +K++D  S  ++AL  IP +GEIADA +I++ + A AA+V+ T ++GG++ 
Sbjct  591  GLHEFLKWDSKILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQVVDTAIQGGDMS  650

Query  669  KALAEAGINLASAALGAIAGPEARV  693
             AL  AGIN+A+A +GA++GP AR+
Sbjct  651  LALKLAGINMAGAVVGAVGGPTARI  675


 Score =  114 bits (414),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 72/135 (54%), Positives = 96/135 (72%), Gaps = 7/135 (5%)

Query  241  KIKGKDLAEFAKGHPQVLTWNSGTLNNSQLEIMSVLARHKDKLPIEWKSIQDKANDPSLP  300
            +IKGKD +    G    +TWN GTL +S+L+I+S L  HKD++PIE K+++DK NDPS P
Sbjct  111  NIKGKDAPPALEG--STVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTP  168

Query  301  PDLRAALQALANDPALFFAIGSQGDGKCGGKIKAGDVSKFADNHPQVIEYNRKKAEGYVK  360
            PDL+AALQ+L +DP LFFAIGSQGDGKCGGK+ A D+  F+D+HPQV +   K+ E    
Sbjct  169  PDLKAALQGLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDE----  224

Query  361  DYIPSDAKPGDKPSA  375
             + P D K ++ P A
Sbjct  225  -FNPKDIKGSNPPQA  238


 Score = 86.0 bits (307),  Expect = 7e-18, Method: Compositional matrix adjust.
 Identities = 54/102 (53%), Positives = 81/102 (80%), Gaps = 1/102 (0%)

Query  157  CQPSAPPVGSDVTWNGGTLNDTQLQIIGILNLHKDQGD-ISWDSIQDKINDPNTPPDLKW  215
             +P+ ++ GS VTWN+G LN+++L+I+++L+ HKDQ D +S D ++ KINDP+T PDLK 
Sbjct  233  SNPPQAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKK  292

Query  216  ALQALSQDFNLFQAIGSQGDGRFGGKIKGKDLAEFAKGHPQV  257
            AL++L +D  LF AIGSQ DG+ GGKIK++DL++F+  HPQ+
Sbjct  293  ALKGLQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQI  334

15) popF1 in NC_003296


> AB045312|1|G1|9711604|BAB07869.1|Xanthomonas_oryzae_pv._oryzae_MAFF_311018|+|593..2965|hrpF|-|HrpF
Length=790

 Score =  392 bits (1473),  Expect = 4e-110, Method: Compositional matrix adjust.
 Identities = 274/563 (49%), Positives = 396/563 (71%), Gaps = 35/563 (6%)

Query  98   TPPV--GSDVTWNGGTLNDTQLQIIGILNLHKDKGDISWDKLQDKINDPDTPPDLKWALQ  155
            +PP   GS VTWN+GTL  ++LQI++ LN HKD+  I   +L+DKINDP TPPDLK ALQ
Sbjct  117  APPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQ  176

Query  156  ALSQDFNLFQAIGSQGDGRFGGKIKGKDLAEFAKSHSQV---------------------  194
            +L QD  LF AIGSQGDG+ GGK+ ++DL +F+ SH+QV                     
Sbjct  177  GLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPP  236

Query  195  -------LTWNSGTLNDSQLEIMSILARHKDKM-PVDWSSIQDKINDPSTPSDLKAALQA  246
                   +TWN G LN+S+LEI+S+L RHKD++ ++    ++ KINDPST +DLK AL++
Sbjct  237  QAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKG  296

Query  247  LANDPALFFAIGSQGDGNCKGKIKAGDVSKFADNHPQVEEYNRKKAEGYVKNYIPSDAKP  306
            L +DP LFFAIGSQ DG+C GKIKA D++ F+  HPQ+ EYN KKA +Y +NYI+SD+  
Sbjct  297  LQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPD  356

Query  307  GDKPSAMTQNDALRELYRYSDYLPKKLDMEAFQRIVDGDSDVKKAPPQVIAAAEYFLQNR  366
              K+S MT++DALRE+YRYSDYLP +L  + F +IVDGDS   K PPQ+IAAA+YF ++ 
Sbjct  357  KTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHP  416

Query  367  NEWASLNKMDDPDKRVGKSDFLQRAASAVHLSKEDLQTVSTINSNLDVFFKDGQKITRDR  426
            +EW  ++   +    ++ +DFLQ+++S +HL+ ++ +T+ TINS+ D F+ DG+ +TRD+
Sbjct  417  DEWKEFS---GDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDK  473

Query  427  LAAMSQDESLSPAVRNAAKQLLQDPLLYGLINNANSGYKTKNGFFSFGGPTVDSGVIGKK  486
            L A+S+D+   PAV++AA QL  DPLL+GL+NN+ +GYK  + FF+ GG  VDSG I+++
Sbjct  474  LDAISKDNKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFG-GGHVVDSGKISQN  532

Query  487  DFEKFMSSMTDANKTVQARKTHPANSEASKSAVADMGMGMEDQPDIKAVKKSGGALKKAM  546
            DF +F   M+ ANKTV++  TH A+S   + AVADM MG +D P IK  KK  G++++++
Sbjct  533  DFRQFYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIKKPKKDVGTFQQGL  592

Query  547  DKILTIYSKVMDIASQVVGALGVIPGLGEIadalsmgmaagasaaKVLSTLLNGGSLKKA  606
            + +L   SK++D  S  ++AL  IP +GEIADA ++++ + A AA+V+ T ++GG +  A
Sbjct  593  HEFLKWDSKILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQVVDTAIQGGDMSLA  652

Query  607  LAEAGINLASAALGAVAGPEARV  629
            L  AGIN+A+A +GAV+GP AR+
Sbjct  653  LKLAGINMAGAVVGAVGGPTARI  675


 Score =  112 bits (407),  Expect = 8e-26, Method: Compositional matrix adjust.
 Identities = 69/135 (52%), Positives = 97/135 (72%), Gaps = 7/135 (5%)

Query  178  KIKGKDLAEFAKSHSQVLTWNSGTLNDSQLEIMSILARHKDKMPVDWSSIQDKINDPSTP  237
            +IKGKD +  +  ++  +TWN GTL  S+L+I+S L  HKD+MP++  +++DKINDPSTP
Sbjct  111  NIKGKDAP--PALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTP  168

Query  238  SDLKAALQALANDPALFFAIGSQGDGNCKGKIKAGDVSKFADNHPQVEEYNRKKAEGYVK  297
            +DLKAALQ+L +DP LFFAIGSQGDG+C GK+ A D+  F+D+HPQV +   K+ E    
Sbjct  169  PDLKAALQGLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDE----  224

Query  298  NYIPSDAKPGDKPSA  312
             + P D K ++ P A
Sbjct  225  -FNPKDIKGSNPPQA  238


 Score = 86.5 bits (309),  Expect = 4e-18, Method: Compositional matrix adjust.
 Identities = 54/102 (53%), Positives = 82/102 (81%), Gaps = 1/102 (0%)

Query  94   SQPATPPVGSDVTWNGGTLNDTQLQIIGILNLHKDKGD-ISWDKLQDKINDPDTPPDLKW  152
            S+P+ ++ GS VTWN+G LN+++L+I+++L+ HKD+ D +S D+L+ KINDP T PDLK 
Sbjct  233  SNPPQAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKK  292

Query  153  ALQALSQDFNLFQAIGSQGDGRFGGKIKGKDLAEFAKSHSQV  194
            AL++L +D  LF AIGSQ DG+ GGKIK++DL++F+  H+Q+
Sbjct  293  ALKGLQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQI  334

16) F504_5021 in NC_021745


> AB045312|1|G1|9711604|BAB07869.1|Xanthomonas_oryzae_pv._oryzae_MAFF_311018|+|593..2965|hrpF|-|HrpF
Length=790

 Score =  390 bits (1468),  Expect = 1e-109, Method: Compositional matrix adjust.
 Identities = 273/563 (49%), Positives = 396/563 (71%), Gaps = 35/563 (6%)

Query  69   TPPV--GSDVTWNGGTLNDTQLQIIGILNLHKDKGDISWDKLQDKINDPDTPPDLKWALQ  126
            +PP   GS VTWN+GTL  ++LQI++ LN HKD+  I   +L+DKINDP TPPDLK ALQ
Sbjct  117  APPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQ  176

Query  127  ALSQDFNLFQAIGSQGDGRFGGKIKGKDLAEFAKSHSQV---------------------  165
            +L QD  LF AIGSQGDG+ GGK+ ++DL +F+ SH+QV                     
Sbjct  177  GLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPP  236

Query  166  -------LTWNSGTLNDSQLEIMSILARHKDKM-PVDWSSIQDKINDPSTPSDLKAALQA  217
                   +TWN G LN+S+LEI+S+L RHKD++ ++    ++ KINDPST +DLK AL++
Sbjct  237  QAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKG  296

Query  218  LANDPALFFAIGSQGDGNCKGKIKAGDVSKFADNHPQVEEYNRKKAEGYVKNYIPSDAKP  277
            L +DP LFFAIGSQ DG+C GKIKA D++ F+  HPQ+ EYN KKA +Y +NYI+SD+  
Sbjct  297  LQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPD  356

Query  278  GDKPSAMTQNDALRELYRYSDYLPKKLDMEAFQRIVDGDSDVKKAPPQVIAAAEYFLQNR  337
              K+S MT++DALRE+YRYSDYLP +L  + F +IVDGDS   K PPQ+IAAA+YF ++ 
Sbjct  357  KTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHP  416

Query  338  NEWASLNKMDDPDKRVGKSDFLQRAASAVHLSKEDLQTVSTINSNLDVFFKDGQKITRDR  397
            +EW  ++   +    ++ +DFLQ+++S +HL+ ++ +T+ TINS+ D F+ DG+ +TRD+
Sbjct  417  DEWKEFS---GDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDK  473

Query  398  LASMSQDESLSPAVRNAAKQLLQDPLLYGLINNANSGYKTKNGFFSFGGPTVDSGVIGKK  457
            L ++S+D+   PAV++AA QL  DPLL+GL+NN+ +GYK  + FF+ GG  VDSG I+++
Sbjct  474  LDAISKDNKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFG-GGHVVDSGKISQN  532

Query  458  DFEKFMSSMTDANKTVQARKTHPANSEASKSAVADMGMGMEDQPDIKAVKKSGGALKKAM  517
            DF +F   M+ ANKTV++  TH A+S   + AVADM MG +D P IK  KK  G++++++
Sbjct  533  DFRQFYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIKKPKKDVGTFQQGL  592

Query  518  DKILTIYSKVMDIASQVVGALGVIPGLGEIadalsmgmaagasaaKVLSTLLNGGSLKKA  577
            + +L   SK++D  S  ++AL  IP +GEIADA ++++ + A AA+V+ T ++GG +  A
Sbjct  593  HEFLKWDSKILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQVVDTAIQGGDMSLA  652

Query  578  LAEAGINLASAALGAVAGPEARV  600
            L  AGIN+A+A +GAV+GP AR+
Sbjct  653  LKLAGINMAGAVVGAVGGPTARI  675


 Score =  112 bits (407),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 69/135 (52%), Positives = 97/135 (72%), Gaps = 7/135 (5%)

Query  149  KIKGKDLAEFAKSHSQVLTWNSGTLNDSQLEIMSILARHKDKMPVDWSSIQDKINDPSTP  208
            +IKGKD +  +  ++  +TWN GTL  S+L+I+S L  HKD+MP++  +++DKINDPSTP
Sbjct  111  NIKGKDAP--PALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTP  168

Query  209  SDLKAALQALANDPALFFAIGSQGDGNCKGKIKAGDVSKFADNHPQVEEYNRKKAEGYVK  268
            +DLKAALQ+L +DP LFFAIGSQGDG+C GK+ A D+  F+D+HPQV +   K+ E    
Sbjct  169  PDLKAALQGLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDE----  224

Query  269  NYIPSDAKPGDKPSA  283
             + P D K ++ P A
Sbjct  225  -FNPKDIKGSNPPQA  238


 Score = 85.5 bits (305),  Expect = 8e-18, Method: Compositional matrix adjust.
 Identities = 54/102 (53%), Positives = 82/102 (81%), Gaps = 1/102 (0%)

Query  65   SQPATPPVGSDVTWNGGTLNDTQLQIIGILNLHKDKGD-ISWDKLQDKINDPDTPPDLKW  123
            S+P+ ++ GS VTWN+G LN+++L+I+++L+ HKD+ D +S D+L+ KINDP T PDLK 
Sbjct  233  SNPPQAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKK  292

Query  124  ALQALSQDFNLFQAIGSQGDGRFGGKIKGKDLAEFAKSHSQV  165
            AL++L +D  LF AIGSQ DG+ GGKIK++DL++F+  H+Q+
Sbjct  293  ALKGLQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQI  334