Name : CPR_0658 (CPR_0658)
Accession : YP_697985.1
PAI name : Not named
PAI accession : NC_008262_P4
Strain : Clostridium perfringens ATCC 13124
Virulence or Resistance: Virulence
Product : lactococcin g processing and transport ATP-binding protein
Function : -
Note : identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412; match to protein family HMM TIGR01193
Homologs in the searched genomes : 65 hits ( 65 protein-level )
Publication :
-Myers,G.S., Rasko,D.A., Cheung,J.K., Ravel,J., Seshadri,R., DeBoy,R.T., Ren,Q., Varga,J., Awad,M.M., Brinkac,L.M., Daugherty,S.C., Haft,D.H., Dodson,R.J., Madupu,R., Nelson,W.C., Rosovitz,M., Sullivan,S.A., Khouri,H.M., Dimitrov,G., Watkins,K.L., Mulligan, "Direct Submission", Submitted (06-APR-2006) The Institute for Genomic Research, 9712 Medical Center Dr, Rockville, MD 20850, USA.
-Myers,G.S., Rasko,D.A., Cheung,J.K., Ravel,J., Seshadri,R., DeBoy,R.T., Ren,Q., Varga,J., Awad,M.M., Brinkac,L.M., Daugherty,S.C., Haft,D.H., Dodson,R.J., Madupu,R., Nelson,W.C., Rosovitz,M.J., Sullivan,S.A., Khouri,H., Dimitrov,G.I., Watkins,K.L., Mullig, "Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens", Genome Res. 16 (8), 1031-1040 (2006) PUBMED 16825665.
-Myers,G.S., Rasko,D.A., Cheung,J.K., Ravel,J., Seshadri,R., DeBoy,R.T., Ren,Q., Varga,J., Awad,M.M., Brinkac,L.M., Daugherty,S.C., Haft,D.H., Dodson,R.J., Madupu,R., Nelson,W.C., Rosovitz,M.J., Sullivan,S.A., Khouri,H., Dimitrov,G.I., Watkins,K.L., Mullig, "Direct Submission", Submitted (28-JUL-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
TTGTTTTATAATAATAAATATTTAATAAAACAACATGACAGTACAGATTGCGCAGCAGCATGTTTAGCTAGTGTATGTAT
GTATTATAAAAAAGAAATTACAATAACTAAACTTAGAGATATTCTTGGTACAGATATTAAGGGGACAACGCTTAAAGGTT
TAGAAAATGGTGCTAATAGATTAGGATTTGATACCAAAGCTATTCGAGTTGATAAATCCGGTTTTATGAGTAAGTTTACT
TTACCAGCTATAGCACACATAGTTACTGATGAAGGATTAAGTCATTTTGTTATTATACATAAAATAAAAAATAATAAAGT
TATCATACTAGATCCAGCCAAGGGAAAAGAAAAGGAAAATATAAATGAATTTTTTAAAAGGTTTGATGGCATACTTCTTT
TACTTGCTCCTAATAATGATTTTAGTTTAGATAGGTCTAAAGAAGAAGGAACTTTATCAAAGTTTATAAAAATACTTTTA
CCACAAAAGAAATTATTTATTTGTAGTATTATAAGCTCAGTTATATTGACCGTTTTAGGTATATCAACATCTTTTTTTAA
TAAGATTTTAATTGATGAAATTTTACCTTATGGATTAAAGAATCAACTTATTATTTTTTGTATATGTTTTATAACTTTAG
GAGTAACTCAAGTTTTAATATCGGCTATAAGACAACATATGTTGTTATATTTATCTCAAAAAATAGATATACCTTTGTTG
TTAGGTTATTTTAAACATGTATATAAACTACCTACTAAGTTTTTTGAAACAAGAAAAGTAGGTGATATATTAACTCGATT
TAGTGATGCTTTTGTAATAAAAAATATTTTAACATCTGTAACTTTATCATTAATAATTGATATAGTTTTAACAGTAGTAT
CTGCAATAATTCTTTGTTTAATGAATAAAACATTATTTTTAGTAGTAATAATTCTTACTTTAATAAGTGCTTCTCTTATA
TTTATTTTTAAAATACCTTATAAAAAAATAAATTTAAAGCAAATGGAAGCTAGTTCTAGTCTTAATAGTACTATAATCGA
AAGTTTAAGAGGCATAGATACTATAAAGTATCATGCAGCTGAAGAAAAGACTATAGAAAAATTAGAAAAAGAGTATATAA
AAAATCTTAAAATAACTTTTCAAGAAGGAGTATTATCTAACATTCAAGGGTCTATATCATCTTTTATATCTTATACAGGA
AATTTAGCTCTTATGTCCATAGGTGCAACTATGGTTATGAGTGGGAAAACAACTTTAGGAAGTTTAATGGCCTTTACAAC
ACTTTCTGGATATTTTATGGGTCCAATAAACAGACTTATTGGGTTACAGCTAAGTATACAAGAAGCTAGTATTTCTTTAA
AAAGAATTTCAGAAATATATGAAGTTGAAGAAGAGCAAGAAGAAAATGACAATAAATTTAAAATAAAAAAAATAGATGGA
GATATAGTTCTTAAAAATATTACTTTTAGATATGGGAGTAGATCACCTGTTTTAAAGAATTTAAATCTTACTATTCCAAA
GGGGAAAAAGGTTGCTTTAGTTGGTGAATCAGGAAGTGGGAAAACTACTATATCAAAACTTTTACTAAAATCCTTTGATG
TTGAAGAAGGAAGTATAAAAATTTCTGGAAAGGATATAAACGATATTGATTTATATTCCTTAAGAAAAGCTATATCTTAT
GTTCCTCAAAATATAGAGTTATTTTCAGGAACTATTAAGGATAATGTTATTTTAGGAAAAAGTAATGTTACAAATGAACA
AATTTCTATTGCTTGTGAAAATGCAGGATGTAGCTCTTTTATTGAAAAACTTCCTGGAAAGTATGATACTTTTTTAGAAG
AAGCCGGTAGAGATCTTTCAGGTGGAGAAAAACAAAGAATTGCTATGGCTAGAGCTTTAATAAAGGATACAGATTTATTA
ATTTTAGATGAAGCGACTAGTAATTTAGATTTTATAAGTGAAGCTAGGATTTATAATACTTTATTTGTAAAGTGTAAAAG
TAAAACTATGTTAATAATTGCACATAGACTTTCAACTATAAGAAATTGTGATATTATATATGTTTTACATAAAGGTGAGG
TTGTTGAACAAGGAAATCATCAAAGTTTACTTGACAAGAAAGGATATTATTATAAGTTATATGTTAGCCAAGTTGGTGAA
ATATCTATTGAAAAGAAAGATAGAGATAAAACTATCATAAAAGAAGAAAGTAACATAAAAATTGTAGATTATAATATAGA
AAATTTAGAGGACATGGAGAATGATGAATACGAATATGTATAA
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| Protein sequence : | |
MFYNNKYLIKQHDSTDCAAACLASVCMYYKKEITITKLRDILGTDIKGTTLKGLENGANRLGFDTKAIRVDKSGFMSKFT
LPAIAHIVTDEGLSHFVIIHKIKNNKVIILDPAKGKEKENINEFFKRFDGILLLLAPNNDFSLDRSKEEGTLSKFIKILL
PQKKLFICSIISSVILTVLGISTSFFNKILIDEILPYGLKNQLIIFCICFITLGVTQVLISAIRQHMLLYLSQKIDIPLL
LGYFKHVYKLPTKFFETRKVGDILTRFSDAFVIKNILTSVTLSLIIDIVLTVVSAIILCLMNKTLFLVVIILTLISASLI
FIFKIPYKKINLKQMEASSSLNSTIIESLRGIDTIKYHAAEEKTIEKLEKEYIKNLKITFQEGVLSNIQGSISSFISYTG
NLALMSIGATMVMSGKTTLGSLMAFTTLSGYFMGPINRLIGLQLSIQEASISLKRISEIYEVEEEQEENDNKFKIKKIDG
DIVLKNITFRYGSRSPVLKNLNLTIPKGKKVALVGESGSGKTTISKLLLKSFDVEEGSIKISGKDINDIDLYSLRKAISY
VPQNIELFSGTIKDNVILGKSNVTNEQISIACENAGCSSFIEKLPGKYDTFLEEAGRDLSGGEKQRIAMARALIKDTDLL
ILDEATSNLDFISEARIYNTLFVKCKSKTMLIIAHRLSTIRNCDIIYVLHKGEVVEQGNHQSLLDKKGYYYKLYVSQVGE
ISIEKKDRDKTIIKEESNIKIVDYNIENLEDMENDEYEYV
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