Name : SAUSA300_1404 (SAUSA300_1404)
Accession : YP_494101.1
PAI name : phi_Sa2
PAI accession : NC_007793_P4
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : phiSLT ORF 563-like protein, terminase, large subunit
Function : -
Note : identified by match to protein family HMM PF03354
Homologs in the searched genomes : 45 hits ( 45 protein-level )
Publication :
-Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Complete genome sequence of USA300, an epidemic clone of community-acquired meticillin-resistant Staphylococcus aureus", Lancet 367 (9512), 731-739 (2006) PUBMED 16517273.
-Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Direct Submission", Submitted (11-FEB-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Direct Submission", Submitted (30-JAN-2006) Department of Medicine, University of California, San Francisco, San Francisco, CA 94143, USA.
| DNA sequence : | |
GTGACTATTAAAGTTTTAAATGAACCTTCACCAAAACTATTAACAACATGGTATGCAGAGCAAGTCACTCAAGGGAAAAT
AAAAACAAGCAAATATGTTAAAAAAGAATGTGAGAGACACCTTAGATATCTAGAAAATGGAGGTAAATGGGTATTTGATG
AAGAATTAGCGCACCGTCCTATTCGATTCATAGAAAAGTTTTGTAAACCTTCCAAAGGATCTAAACGTCAACTTGTATTA
CAACCATGGCAACATTTTATTATTGGCAGTTTGTTTGGTTGGGTTCATAAAGAAACAAAACTGCGCAGGTTTAAAGAAGC
TTTGATATTTATGGGGCGAAAAAATGGTAAAACAACTACTATATCTGGTGTTGCTAACTATGCTGTTTCTCAAGATGGAG
AAAACGGCGCTGAAATCCATCTTTTAGCAAACGTAATGAAACAAGCTAGAATATTATTCGATGAATCTAAGGCGATGATA
AAAGCTAGCCCAAAGCTTGATAAAAATTTCAGAACATTAAGAGATGAAATCCATTATGACGCAACGATATCAAAAATTAT
GCCCCAAGCATCAGATAGCGATAAGTTAGATGGATTGAATACACACATGGGGATTTTTGATGAAATTCATGAATTTAAAG
ACTATAAATTGATTTCAGTTATAAAAAACTCAAGAGCTGCAAGGTTACAACCTCTTCTCATCTACATTACGACAGCAGGG
TATCAATTAGATGGTCCACTTGTTGATATGGTAGAAGCGGGAAGAGACACCTTAGATCAAATCATAGAAGACGAAAGAAC
TTTTTATTATTTAGCATCTTTGGATGATGACGATGATATTAATGATTCGTCGAACTGGATAAAAGCAAATCCCAACTTAG
GTGTCTCTATAAATTTAGATGAGATGAAAGAAGAGTGGGAAAAAGCTAAGAGAACACCAGCTGAACGTGGAGATTTTATA
ACCAAAAGGTTTAATATCTTTGCTAATAATGACGAGATGAGTTTTATTGATTACCCAACACTCCAAAAAAATAATGAAAT
TGTTTCTTTAGAAGAGCTGGAAGGCAGACCATGCACGATTGGTTATGATTTATCAGAAACAGAGGACTTTACAGCCGCGT
GTGCTACTTTTGCGTTAGATAATGGTAAAGTTGCAGTTTTATCGCATTCATGGATTCCTAAGCACAAAGTTGAATATTCT
AACGAAAAAATACCCTATAGAGAATGGGAAGAAGATGGCTTATTAACAGTGCAAGATAAGCCTTATATTGACTACCAAGA
TGTTTTAAATTGGATAATTAAGATGAATGAGCATTATGTAGTAGAAAAAATTACTTATGATAGAGCGAACGCATTCAAAC
TAAATCAAGAGTTAAAAAATTACGGGTTTGAAACGGAAGAAACAAGACAAGGAGCTTTGACCTTGAGCCCTGCATTGAAG
GATTTAAAAGAAATGTTTTTAGATGGGAAAATAATATTTAATAATAATCCTTTAATGAAATGGTATATCAATAATGTTCA
GTTGAAACTAGACAGAAACGGAAACTGGTTGCCGTCTAAGCAAAGCAGATATCGTAAAATAGATGGCTTTGCAGCATTTT
TAAACACATATACAGATATTATGAATAAAGTTGTTTCTGACAAGGGTGAAGGAAACATAGAATTTATTAGTATTAAAGAT
ATAATGCGTTAA
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| Protein sequence : | |
MTIKVLNEPSPKLLTTWYAEQVTQGKIKTSKYVKKECERHLRYLENGGKWVFDEELAHRPIRFIEKFCKPSKGSKRQLVL
QPWQHFIIGSLFGWVHKETKLRRFKEALIFMGRKNGKTTTISGVANYAVSQDGENGAEIHLLANVMKQARILFDESKAMI
KASPKLDKNFRTLRDEIHYDATISKIMPQASDSDKLDGLNTHMGIFDEIHEFKDYKLISVIKNSRAARLQPLLIYITTAG
YQLDGPLVDMVEAGRDTLDQIIEDERTFYYLASLDDDDDINDSSNWIKANPNLGVSINLDEMKEEWEKAKRTPAERGDFI
TKRFNIFANNDEMSFIDYPTLQKNNEIVSLEELEGRPCTIGYDLSETEDFTAACATFALDNGKVAVLSHSWIPKHKVEYS
NEKIPYREWEEDGLLTVQDKPYIDYQDVLNWIIKMNEHYVVEKITYDRANAFKLNQELKNYGFETEETRQGALTLSPALK
DLKEMFLDGKIIFNNNPLMKWYINNVQLKLDRNGNWLPSKQSRYRKIDGFAAFLNTYTDIMNKVVSDKGEGNIEFISIKD
IMR
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