Name : SAUSA300_1393 (SAUSA300_1393)
Accession : YP_494090.1
PAI name : phi_Sa2
PAI accession : NC_007793_P4
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : phiSLT ORF2067-like protein, phage tail tape measure protein
Function : -
Note : identified by match to protein family HMM PF01464; match to protein family HMM PF01551; match to protein family HMM TIGR01760
Homologs in the searched genomes : 19 hits ( 18 protein-level, 1 DNA-level )
Publication :
-Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Complete genome sequence of USA300, an epidemic clone of community-acquired meticillin-resistant Staphylococcus aureus", Lancet 367 (9512), 731-739 (2006) PUBMED 16517273.
-Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Direct Submission", Submitted (11-FEB-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Direct Submission", Submitted (30-JAN-2006) Department of Medicine, University of California, San Francisco, San Francisco, CA 94143, USA.
| DNA sequence : | |
ATGAATGAAAAAGTAGAAGGCATGACCTTGGAGCTGAAATTAGACCATTTAGGTGTCCAAGAATGCATGAAAGGTTTAAA
GCGACAATTAGGTGTTGTTAATAGTGAAATGAAAGCTAATCTGTCAGCATTTGATAAGTCTGAAAAATCAATGGAAAAAT
ATCAGGCGAGAATTAAGGGGTTAAATGATAGGCTTAAAGTTCAAAAAAAGATGTATTCTCAAGTAGAAGATGAGCTTAAA
CAAGTTAACGCTAATTACCAAAAAGCTAAATCCAGTGTAAAAGATGTTGAGAAAGCATATTTAAAGTTAGTAGAAGCCAA
TAAAAAAGAAAAATTAGCTCTTGATAAATCTAAAGAAGCCTTAAAATCATCGAATACAGAACTTAAAAAAGCTGAAAATC
AATATAAACGTACAAATCAACGTAAACAAGATGCGTATCAAAAACTTAAACAGTTGAGAGATGCAGAACAAAAGCTTAAG
AATAGTAACCAAGCTACTACTGCACAACTAAAAAGAGCAAGTGACGCAGTACAGAAGCAGTCCGCTAAGCATAAAGCACT
TGTTGAACAATATAAACAAGAAGGCAATCAAGTTCAAAAACTAAAAGTGCAAAATGACAATCTTTCAAAATCAAATGATA
AAATTGAAAGTTCTTACGCTAAAACTAATACTAAATTAAAGCAAACAGAAAAAGAATTTAATGATTTAAACAATACTATT
AAGAATCATAGCGCTAATGTCGCAAAAGCTGAAACAGCTGTTAATAAAGAAAAAGCTGCTTTAAATAATTTGGAGCGTTC
AATAGATAAAGCTTCATCCGAAATGAAGACTTTTAACAAAGAACAAATGATAGCTCAAAGTCATTTCGGTAAACTTGCAA
GTCAAGCGGATGTCATGTCAAAGAAATTTAGTTCTATTGGAGACAAAATGACTTCCCTGGGACGTACAATGACGATGGGC
GTATCTACACCAATTACTTTAGGGTTAGGTGCAGCATTAAAAACAAGTGCAGACTTTGAAGGCCAAATGTCTCGAGTTGG
AGCGATTGCGCAAGCAAGCAGTAAAGACTTGAAAAGCATGTCTAATCAAGCAGTTGACTTAGGAGCTAAAACCAGTAAAA
GTGCTAACGAAGTTGCTAAAGGTATGGAAGAATTGGCAGCTTTAGGCTTTAATGCCAAACAAACAATGGAGGCTATGCCA
GGTGTTATCAGTGCAGCAGAAGCAAGTGGTGCAGAAATGGCTACAACTGCAACTGTAATGGCTTCAGCGATTAACTCTTT
CGGTTTAAAAGCATCTGATGCAAATCATGTTGCTGATTTACTTGCGAGATCAGCAAATGATAGTGCTGCAGATATTCAGT
ACATGGGAGATGCATTGAAGTATGCTGGTACTCCTGCAAAAGCATTAGGAGTTTCAATAGAGGACACTTCCGCAGCAATT
GAAGTTTTATCTAACTCAGGTTTAGAGGGTTCTCAAGCAGGTACTGCCCTAAGAGCTTCATTTATCAGGCTAGCTAATCC
AAGTAAAAATACAGCTAAGGAAATGAAAAAATTAGGTATTCATTTGTCTGATGCTAAAGGTCAATTTGTTGGCATGGGTG
AATTGATTAGACAGTTCCAAGATAATATGAAAGGCATGACGAGAGAACAAAAACTAGCTACAGTGGCTACAATAGTTGGT
ACTGAAGCAGCAAGTGGATTTTTAGCCTTGATTGAAGCGGGACCAGATAAAATTAATAGCTATAGTAAATCCTTAAAGAA
TTCCAATGGCGAAAGTAAAAAAGCAGCAGATTTGATGAAAGATAATCTCAAAGGCGCTCTGGAACAATTAGGTGGCGCTT
TTGAATCATTAGCAATCGAAGTCGGTAAAGATTTAACGCCTATGATTAGAGCAGGAGCGGAAGGTTTAACAAAATTAGTT
GATGGATTTACACATCTCCCTGGTTGGGTTAGAAAAGCTTCAGTAGGATTAGCACTTTTTGGTGCAGCAATTGGACCTGC
AGTTCTTGCTGGAGGGTTATTAATACGTACAGTTGGAAGTGCTGCTAAAGGATATGCGTCATTAAATAGACGTATTGCTG
AAAATACAATCCTTTCAAATACTAATTCAAAAGCAATGAAATCTTTAGGTCTTCAAACATTATTTCTTGGTTCTACAACA
GGAAAAACGTCAAAAGGCTTTAAAGGGTTAGCCGGAGCTATGATGTTTAATTTAAAACCTATAAATGTTTTGAAAAATTC
TGCAAAGCTAGCAATTTTACCGTTCAAACTTTTGAAAAACGGTTTAGGATTAGCTGCAAAATCTTTATTTGCAGTAAGTG
GAGGCGCAAGATTTGCGGGTGTAGCCTTAAGGTTTTTAACAGGACCTATAGGTGCTACAATAACTGCTATTACAATTGCG
TATAAAGTTTTTAAAACCGCATATGATCGTGTGGAATGGTTCAGAAACGGTATTAACGGTTTAGGAGAAACTATAAAGTT
TTTTGGTGGTAAAATTATTGGCGGCGCTGTTAGAAAGCTAGGAGAGTTTAAAAACTATCTTGGAAGTATCGGCAAAAGCT
TCAAAGAAAAGTTTTCAAAAGATATGAAAGATGGTTATAAATCATTAAGCGACGATGACCTTCTCAAAGTAGGAGTCAAC
AAGTTTAAAGGATTTATGCAAACCATGGGCACAGCTTCTAAAAAAGCGTCTGATACTGTAAAAGTGTTAGGGAAAGGTGT
TTCAAAAGAAACAGAAAAAGCTTTAGAAAAATATGTGCATTATTCTGAAGAAAATAGCAGAATCATGGAAAAAGTACGTT
TAAACTCGGGTCAGATATCAGAAGACAAAGCAAAAAAACTTTTGAAAATTGAAACGGATTTATCTAATAACCTTATAGCT
GAAATAGAAAAAAGAAATAAAAAGGAACTCGAAAAAACTCAAGAACTTATTGATAAGTATAGTGCATTCGATGAACAAGA
AAAGCAAAACATTTTAACTCGAACTAAAGAAAAAAATGACTTGCGAATTAAAAAAGAGCAAGAACTCAATCAGAAAATCA
AAGAATTGAAAGAAAAAGCTTTGAGTGATGGTCAGATTTCAGAAAATGAAAGAAAAGAAATTGAAAAGCTTGAAAATCAA
AGACGTGATATCACTGTTAAAGAATTGAGTAAGACTGAAAAAGAGCAAGAGCGTATTTTAGTAAGAATGCAAAGAAACAG
AAATGCTTATTCAATAGACGAAGCGAGCAAAGCAATTAAAGAAGCAGAAAAAGCAAGAAAAGCAAGAAAAAAAGAAGTGG
ACAAGCAATATGAAGATGATGTCATTGCTATAAAAAATAACGTCAACCTTTCTAAGTCTGAAAAAGATAAATTGTTAGCT
ATTGCTGATCAAAGACATAAAGATGAAGTAAGAAAAGCAAAATCTAAAAAAGATGCTGTAGTAGATGTTGTTAAAAAGCA
AAATAAAGATATTGATAAAGAAATGGATTTATCCAGTGGACGTGTATATAAAAATACTGAAAAGTGGTGGAATGGCCTTA
AAAGTTGGTGGTCTAACTTTAGAGAAGACCAAAAGAAAAAAAGCGATAAATACGCTAAAGAACAAGAAGAAACAGCTCGT
AGAAACAGAGAAAATATAAAGAAATGGTTTGGAAATGCTTGGGACGGCGTAAAAAGTAAAACTGGCGAAGCCTTTAGTAA
AATGGGCAGAAATGCTAATCATTTTGGCGGCGAAATGAAAAAAATGTGGAGCGGAATCAAAGGGATTCCAAGCAAATTAA
GTTCAGGTTGGAGCTCAGCCAAAAGTTCTGTAGGATACCACACTAAGGCTATAGCTAATAGTACTGGTAAATGGTTTGGA
AAAGCTTGGCAATCTGTTAAATCGACAACAGGAAGTATTTACAATCAAACTAAGCAAAAGTATTCAGATGCTTCAGATAA
AGCTTGGGCGCATTCAAAATCTATTTGGAGAGGCACATCAAAATGGTTTAGCAATGCATATAAAAGTGCAAAGGGCTGGC
TAACGGATATGGCTAATAAATCTCGCGCGAAATGGGATAATATTTCTAGTACAGCTTGGTCGAATGCAAAATCCGTTTGG
AAAGGAACATCGAAATGGTTTAGTAACTCATACAAATCTTTAAAAGATTGGACTGGGGATATGTATTCAAGAGCCCACGA
TCGTTTTGATGCAATTTCAAGTTCGGCATGGTCTAACGCTAAATCAGTATTTAATGGTTTTAGAAAATGGCTATCCAAAA
CATATGATTGGATTAGAGATATTGGTAAAGACATGGGAAGAGCTGCGGCTGATTTAGGTAAAAATGTTGCTAATAAAGCT
ATTGGCGGTTTGAATAGCATGATTGGCGGTATTAATAAAATATCTAAAGCCATTACTGATAAAAATCTCATCAAGCCAAT
ACCTACATTGTCTACTGGTACTTTAGCAGGAAAGGGTGTAGCTACCGATAATTCGGGAGCATTAACGCAACCGACATTTG
CTGTATTAAATGATAGAGGTTCTGGAAACGCCCCAGGTGGTGGAGTTCAAGAAGTAATTCACAGGGCTGACGGAACATTC
CATGCACCCCAAGGACGAGATGTGGTTGTTCCACTAGGAGTTGGGGATAGCGTAATAAATGCTAATGACACTCTGAAGTT
ACAGCGTATGGGTGTTTTACCAAAGTTTCATGGAGGTACGAAAAAGAAAGATTGGCTAGACCAACTTAAAGGTAATATAG
GTAAAAAAGCAGGAGAATTTGGAGCTACAGCTAAAAACACAGCGCATAATATCAAAAAAGGTGCAGAAGAAATGGTTGAA
GCAGCAGGCGATAAAATCAAAGATGGTGCATCTTGGTTAGGCGATAAAATCGGCGATGTGTGGGATTACGTACAACATCC
AGGGAAACTAGTAAATAAAGTAATGTCAGGTTTAAATATTAATTTTGGAGGCGGAGCTAACGCTACAGTAAAAATAGCTA
AAGGCGCATACTCATTGCTCAAAAAGAAATTAGTAGACAAAGTAAAATCGTGGTTTGAAGATTTCGGTGGTGGAGGCGAT
GGAAGCTATCTATTTGAATATCCAATCTGGCAAAGATTTGGACGCTACACAGGTGGACTTAACTTTAATGGCGGTCGTCA
CTATGGTATAGACTTTGGTATGCCTTCTGGAACAAACGTTTATGCCGTTAAAGGTGGTATAGCAGATAAGGTATGGACTG
ATTACGGTGGCGGTAATTCTATACAAATTAAGACTGGTGCTAATGAATGGAACTGGTATATGCATTTATCTAAGCAATTA
GCAAGACAAGGCCAACGTATTAAAGCTGGTCAACTGATAGGGAAATCAGGTGCTACAGGTAATTTCGTTAGAGGAGCACA
CTTACATTTCCAATTGATGCAAGGGTCACATCCAGGGAATGATACAGCTAAAGATCCAGAAAAATGGTTGAAGTCACTTA
AAGGTAGTGGCGTTCGAAGTGGTTCAGGTGTTAATAAGGCTGCATCTGCTTGGGCAGGCGATATACGTCGTGCAGCAAAA
CGAATGGGTGTTAATGTTACTTCGGGTGATGTAGGAAATATTATTAGCTTGATTCAACACGAATCAGGAGGAAATGCAGG
TATAACTCAATCTAGTGCGCTTAGAGACATCAACGTTTTACAGGGCAATCCAGCAAAAGGATTGCTTCAATATATCCCAC
AAACATTTAGACATTATGCTGTTAGAGGTCACAACAATATATATAGTGGTTACGATCAGTTATTAGCGTTCTTTAACAAC
AGATATTGGCGCTCACAGTTTAACCCAAGAGGTGGTTGGTCTCCAAGTGGTCCAAGAAGATATGCGAATGGTGGTTTGAT
TACAAAGCATCAACTTGCTGAAGTGGGTGAAGGAGATAAACAGGAGATGGTTATCCCTTTAACTAGACGTAAACGAGCAA
TTCAATTAACTGAACAGGTTATGCGCATCATCGGTATGGATGGCAAGCCAAATAACATCACTGTAAATAATGATACTTCA
ACAGTTGAAAAATTGTTGAAACAAATTGTTATGTTAAGTGATAAAGGAAATAAATTAACAGATGCATTGATTCAAACTGT
TTCTTCTCAGGATAATAACTTAGGTTCTAATGATGCAATTAGAGGTTTAGAAAAAATATTGTCAAAACAAAGTGGGCATA
GAGCAAATGCAAATAATTATATGGGAGGTTTGACTAATTAA
|
| Protein sequence : | |
MNEKVEGMTLELKLDHLGVQECMKGLKRQLGVVNSEMKANLSAFDKSEKSMEKYQARIKGLNDRLKVQKKMYSQVEDELK
QVNANYQKAKSSVKDVEKAYLKLVEANKKEKLALDKSKEALKSSNTELKKAENQYKRTNQRKQDAYQKLKQLRDAEQKLK
NSNQATTAQLKRASDAVQKQSAKHKALVEQYKQEGNQVQKLKVQNDNLSKSNDKIESSYAKTNTKLKQTEKEFNDLNNTI
KNHSANVAKAETAVNKEKAALNNLERSIDKASSEMKTFNKEQMIAQSHFGKLASQADVMSKKFSSIGDKMTSLGRTMTMG
VSTPITLGLGAALKTSADFEGQMSRVGAIAQASSKDLKSMSNQAVDLGAKTSKSANEVAKGMEELAALGFNAKQTMEAMP
GVISAAEASGAEMATTATVMASAINSFGLKASDANHVADLLARSANDSAADIQYMGDALKYAGTPAKALGVSIEDTSAAI
EVLSNSGLEGSQAGTALRASFIRLANPSKNTAKEMKKLGIHLSDAKGQFVGMGELIRQFQDNMKGMTREQKLATVATIVG
TEAASGFLALIEAGPDKINSYSKSLKNSNGESKKAADLMKDNLKGALEQLGGAFESLAIEVGKDLTPMIRAGAEGLTKLV
DGFTHLPGWVRKASVGLALFGAAIGPAVLAGGLLIRTVGSAAKGYASLNRRIAENTILSNTNSKAMKSLGLQTLFLGSTT
GKTSKGFKGLAGAMMFNLKPINVLKNSAKLAILPFKLLKNGLGLAAKSLFAVSGGARFAGVALRFLTGPIGATITAITIA
YKVFKTAYDRVEWFRNGINGLGETIKFFGGKIIGGAVRKLGEFKNYLGSIGKSFKEKFSKDMKDGYKSLSDDDLLKVGVN
KFKGFMQTMGTASKKASDTVKVLGKGVSKETEKALEKYVHYSEENSRIMEKVRLNSGQISEDKAKKLLKIETDLSNNLIA
EIEKRNKKELEKTQELIDKYSAFDEQEKQNILTRTKEKNDLRIKKEQELNQKIKELKEKALSDGQISENERKEIEKLENQ
RRDITVKELSKTEKEQERILVRMQRNRNAYSIDEASKAIKEAEKARKARKKEVDKQYEDDVIAIKNNVNLSKSEKDKLLA
IADQRHKDEVRKAKSKKDAVVDVVKKQNKDIDKEMDLSSGRVYKNTEKWWNGLKSWWSNFREDQKKKSDKYAKEQEETAR
RNRENIKKWFGNAWDGVKSKTGEAFSKMGRNANHFGGEMKKMWSGIKGIPSKLSSGWSSAKSSVGYHTKAIANSTGKWFG
KAWQSVKSTTGSIYNQTKQKYSDASDKAWAHSKSIWRGTSKWFSNAYKSAKGWLTDMANKSRAKWDNISSTAWSNAKSVW
KGTSKWFSNSYKSLKDWTGDMYSRAHDRFDAISSSAWSNAKSVFNGFRKWLSKTYDWIRDIGKDMGRAAADLGKNVANKA
IGGLNSMIGGINKISKAITDKNLIKPIPTLSTGTLAGKGVATDNSGALTQPTFAVLNDRGSGNAPGGGVQEVIHRADGTF
HAPQGRDVVVPLGVGDSVINANDTLKLQRMGVLPKFHGGTKKKDWLDQLKGNIGKKAGEFGATAKNTAHNIKKGAEEMVE
AAGDKIKDGASWLGDKIGDVWDYVQHPGKLVNKVMSGLNINFGGGANATVKIAKGAYSLLKKKLVDKVKSWFEDFGGGGD
GSYLFEYPIWQRFGRYTGGLNFNGGRHYGIDFGMPSGTNVYAVKGGIADKVWTDYGGGNSIQIKTGANEWNWYMHLSKQL
ARQGQRIKAGQLIGKSGATGNFVRGAHLHFQLMQGSHPGNDTAKDPEKWLKSLKGSGVRSGSGVNKAASAWAGDIRRAAK
RMGVNVTSGDVGNIISLIQHESGGNAGITQSSALRDINVLQGNPAKGLLQYIPQTFRHYAVRGHNNIYSGYDQLLAFFNN
RYWRSQFNPRGGWSPSGPRRYANGGLITKHQLAEVGEGDKQEMVIPLTRRKRAIQLTEQVMRIIGMDGKPNNITVNNDTS
TVEKLLKQIVMLSDKGNKLTDALIQTVSSQDNNLGSNDAIRGLEKILSKQSGHRANANNYMGGLTN
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