Name : SAUSA300_0809 (SAUSA300_0809)
Accession : YP_493509.1
PAI name : SaPI5
PAI accession : NC_007793_P2
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : putative DNA primase
Function : -
Note : Staphylococcus aureus pathogenicity island; identified by match to protein family HMM PF03288; match to protein family HMM TIGR01613
Homologs in the searched genomes : 12 hits ( 12 protein-level )
Publication :
-Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Complete genome sequence of USA300, an epidemic clone of community-acquired meticillin-resistant Staphylococcus aureus", Lancet 367 (9512), 731-739 (2006) PUBMED 16517273.
-Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Direct Submission", Submitted (11-FEB-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Direct Submission", Submitted (30-JAN-2006) Department of Medicine, University of California, San Francisco, San Francisco, CA 94143, USA.
| DNA sequence : | |
GTGGCAATTAAGAAAAAAGATAGAATTATTGGAGTTAAAGAATTAGAAATACCGCAAGAATTAAAATTAGTGCCCAATTG
GGTATTATGGCGAGCTGAATGGAACGAGAAGCAACAAAATTTTGGAAAAGTACCATATAGTATTAATGGTTACAGAGCTA
GTACAACCAATAAAAAAACATGGTGTGACTTTGAAAGTGTAAGTATTGAATATGAAGTTGATGAGCAATATAGCGGTATA
GGTTTTGTATTAAGTGATGGTAATAATTTTGTTTGCCTAGATATTGATAATGCAATTGATAAAAAAGGACAAATCAATTC
TGAATTAGCACTAAAAATGATGCAACTCACATATTGTGAAAAGTCTCCAAGTGGTACAGGATTACATTGTTTCTTTAAAG
GTAAACTACCAGATAACCGTAAAAAGAAAAGAACAGATTTAGACATAGAGTTATATGATTCAGCAAGGTTTATGACTGTT
ACAGGATGCACAATTGGTCAAAGTGATATTTGTGATAATCAAGAAGTATTAAATACTCTAGTTGATGAATATTTTAAAGA
GAATTTGCCAGCAAATGAGGTTGTGAGAGAGGAATCTAATACCAATATACAATTATCTGATGAAGATATTATAAACATTA
TGATGAAATCTAAACAAAAAGATAAAATTAAAGATCTATTACAAGGCACATATGAATCATATTTTGAGAGTTCAAGCGAA
GCAGTACAAAGCTTATTACACTACTTAGCGTTTTACACAGGTAAAAACAAACAGCAAATGGAGCGTATATTTTTAAACTA
CAATAATCTTACGGATAAATGGGAAAGTAAACGAGGTAATACGACTTGGGGACAGCTTGAGTTAGATAAAGCTATAAAGA
ATCAAAAGACAATTTATACTAAATCGATAGATGAATTTAATGTTATACCACAGGGGAGTAAAGATGTTAAACAGTTGTTG
AATCAATTGGGGCATGAAGAAAGAACAAAAATGGAAGAAAATTGGATTGAAGAAGGAAAACGAGGGCGAAAGCCTACAAC
AATTAGCCCTATAAAATGTGCATATATTTTGAATGAGCATTTAACATTTATACTTTTTGATGATGAAGAAAATACTAAGT
TAGCTATGTATCAATTTGATGAAGGGATATATACACAGAACACTACAATTATAAAACGAGTGATTTCCTATTTAGAGCCC
AAACATAATAGCAACAAAGCTGATGAAGTTATTTATCATTTAACCAATATGGTAGATATAAAAGAGAAAACTAACTCACC
ATACTTAATACCAGTTAAAAATGGTGTATTTAACCGTAAAACGAAGCAACTAGAATCATTTACACCTGATTATATATTTA
CCAGTAAAATAGATACATCGTATGTAAGGCAAGATATAGTACCTGAAATAAATGGCTGGAATATAGATCGGTGGATAGAA
GAGATTGCTTGTAATGATAATCAGGTTGTTAAATTATTGTGGCAAGTAATTAATGACTCAATGAATGGTAACTACACTCG
TAAAAAGGCTATTTTCTTTGTTGGTGATGGAAATAATGGTAAAGGGACGTTTCAAGAATTATTGTCTAATGTAATAGGTT
ATAGCAATATTGCTAGCTTAAAAGTGAATGAGTTTGATGAACGTTTTAAATTGAGTGTGTTAGAGGGCAAGACAGCAGTA
ATTGGAGACGATGTACCAGTTGGTGTGTATGTCGATGATTCTTCAAACTTTAAAAGTGTAGTTACTGGCGATCCAGTGTT
GGTTGAGTTTAAAAATAAACCCTTATATAGAGCGACTTTTAAGTGTACAGTTATTCAATCAACGAATGGAATGCCTAAAT
TTAAAGACAAAACAGGCGGGACTTTAAGAAGGTTATTGATAGTACCGTTTAATGCCAATTTTAATGGCATTAAAGAGAAT
TTTAAAATCAAAGAAGACTATATAAAAAATCAGCAAGTGCTAGAGTATGTGCTTTATAAAGCAATTAATTTAGATTTTGA
AACCTTTGACATTCCTGATGCATCTAAAAAAATGCTTGAAGTATTTAAAGAAGATAACGATCCAGTTTATGGGTTTAAAG
TAAATATGTTTGATCAATGGACTATTAGAAAAGTGCCGAAATATATTGTATACGCATTTTATAAAGAATATTGTGATGAA
AATGGCTATAATGCATTGAGTTCAAACAAGTTTTATAAACAATTTGAACATTATTTAGAGAATTATTGGAAAACTGATGC
ACAGCGAAGATATGACAATGAAGAACTTGCTAAGAGGATATACAACTTTAATGACAATAGAAATTACATTGAACCTATTG
AAAGTGGAAAAAACTATAAATCGTATGAAAAGGTGAAGCTAAAAGCAATATAG
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| Protein sequence : | |
MAIKKKDRIIGVKELEIPQELKLVPNWVLWRAEWNEKQQNFGKVPYSINGYRASTTNKKTWCDFESVSIEYEVDEQYSGI
GFVLSDGNNFVCLDIDNAIDKKGQINSELALKMMQLTYCEKSPSGTGLHCFFKGKLPDNRKKKRTDLDIELYDSARFMTV
TGCTIGQSDICDNQEVLNTLVDEYFKENLPANEVVREESNTNIQLSDEDIINIMMKSKQKDKIKDLLQGTYESYFESSSE
AVQSLLHYLAFYTGKNKQQMERIFLNYNNLTDKWESKRGNTTWGQLELDKAIKNQKTIYTKSIDEFNVIPQGSKDVKQLL
NQLGHEERTKMEENWIEEGKRGRKPTTISPIKCAYILNEHLTFILFDDEENTKLAMYQFDEGIYTQNTTIIKRVISYLEP
KHNSNKADEVIYHLTNMVDIKEKTNSPYLIPVKNGVFNRKTKQLESFTPDYIFTSKIDTSYVRQDIVPEINGWNIDRWIE
EIACNDNQVVKLLWQVINDSMNGNYTRKKAIFFVGDGNNGKGTFQELLSNVIGYSNIASLKVNEFDERFKLSVLEGKTAV
IGDDVPVGVYVDDSSNFKSVVTGDPVLVEFKNKPLYRATFKCTVIQSTNGMPKFKDKTGGTLRRLLIVPFNANFNGIKEN
FKIKEDYIKNQQVLEYVLYKAINLDFETFDIPDASKKMLEVFKEDNDPVYGFKVNMFDQWTIRKVPKYIVYAFYKEYCDE
NGYNALSSNKFYKQFEHYLENYWKTDAQRRYDNEELAKRIYNFNDNRNYIEPIESGKNYKSYEKVKLKAI
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