Name : int (SAUSA300_0799)
Accession : YP_493499.1
PAI name : SaPI5
PAI accession : NC_007793_P2
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : integrase
Function : -
Note : Staphylococcus aureus pathogenicity island; identified by match to protein family HMM PF00589
Homologs in the searched genomes : 47 hits ( 47 protein-level )
Publication :
-Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Complete genome sequence of USA300, an epidemic clone of community-acquired meticillin-resistant Staphylococcus aureus", Lancet 367 (9512), 731-739 (2006) PUBMED 16517273.
-Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Direct Submission", Submitted (11-FEB-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Direct Submission", Submitted (30-JAN-2006) Department of Medicine, University of California, San Francisco, San Francisco, CA 94143, USA.
| DNA sequence : | |
ATGTGGTTAGAAAAATTTAAAAATAAGAATAAAGAAACTAAATATAGATATTACGAGAAGTACAAAGACCCTCTCACTGC
CAAATGGAGACGTGTTAGCGTGGTACTTAATAAGAATGGTAAGCAATCACAAAAAGAAGCTCAAAGACTCTTAAATGAGC
GTATAGAAGAAAAACTGAATGATAAGAAACCTACTACACTTAAGTCACTAACTTTCCATGTCGCATGTGATGAGTGGTTT
CAGAATTATATCAAAACGTCTGGGTCAAAAAGAACAACTATTAAAACTAAATTGAGTAAGCTAAACACTTTGAAGAAATT
TGTAGATGAAGATATTTTAATCAATAAAATAACACTTTCATATGCGCAACAAGTTTTCGATGAAATGGATAGTAAAGGTT
ATGTATATCAAGTAAACAAAGATGCGTTAAGCATATTCAAAAATGTATTTGAATACACTAGACGTATCTATAAACTGCAA
GATTTAGAATTTTTAAAAGATATAACATTAAATAAAAGAATTAAGTCTTATGATGAAGTGAAAGCTAAACGTAATAAGTA
CCTCGAATTAAATGAAATAGAATCTATCATCAAAGATATTAATACGAAGGCTCAGAAGATGCACTCAGGTATCCATAAGC
GGTTTTATTTATTCGTTGCACTCATGACAGAATTCCAAGCCTTAAATGGTATGCGTATTGGTGAAATGTTAGCCATTCAA
AATGAAGATATAGACTTTGATAATAAGAGTTTAAATATTAACGGAACAATCCATTGGTTTCACGATGAATCTGGTGGATT
CGGTGTAAAAGATACCACTAAAACAGAGTCTAGTTATAGAACAATTGGATTGAGTAGCAGAAGTTGCGAGATATTAAAGA
AAGCAATACTGGAGAACAAAAAGGATTCAAAATGGAATGATGGATATCTAAATAGAAATTTTGTATTTACTAATCATAAA
GGCAACCCAATGCAGACTGAAAGATTCAATAAAATCCTTAGGGAAGCAGCTAAAGATGTTGGTATTGATAAAGAAGTTTC
TTCACATATATTAAGACATAGCCACATATCATTACTCTCTCAACAAGGCGTGTCACTTAAAGCTATTATGGATCGTGTAG
GCCATTCCGACCACCGTACAACACTTTCCATTTATTCTCACGTTACTGAACAGATGGATAAGGATATGATGAACAAACTT
GAACAGGTAAAACTTGGATAA
|
| Protein sequence : | |
MWLEKFKNKNKETKYRYYEKYKDPLTAKWRRVSVVLNKNGKQSQKEAQRLLNERIEEKLNDKKPTTLKSLTFHVACDEWF
QNYIKTSGSKRTTIKTKLSKLNTLKKFVDEDILINKITLSYAQQVFDEMDSKGYVYQVNKDALSIFKNVFEYTRRIYKLQ
DLEFLKDITLNKRIKSYDEVKAKRNKYLELNEIESIIKDINTKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGEMLAIQ
NEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAILENKKDSKWNDGYLNRNFVFTNHK
GNPMQTERFNKILREAAKDVGIDKEVSSHILRHSHISLLSQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKL
EQVKLG
|
|
