PAI Gene Information


Name : set7 (SAUSA300_0396)
Accession : YP_493110.1
PAI name : vSa_alpha
PAI accession : NC_007793_P1
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Virulence
Product : superantigen-like protein
Function : -
Note : these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation
Homologs in the searched genomes :   94 hits    ( 94 protein-level )  
Publication :
    -Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Complete genome sequence of USA300, an epidemic clone of community-acquired meticillin-resistant Staphylococcus aureus", Lancet 367 (9512), 731-739 (2006) PUBMED 16517273.

    -Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Direct Submission", Submitted (11-FEB-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.

    -Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Direct Submission", Submitted (30-JAN-2006) Department of Medicine, University of California, San Francisco, San Francisco, CA 94143, USA.


DNA sequence : 
ATGAAAATGAAAAATATTGCAAAAATAAGTTTGTTATTAGGAATATTAGCAACAGGTGTAAACACTACAACGGAAAAACC
AGTTCATGCCGAAAAGAAACCTATTGTAATAAGTGAAAATAGCAAAAAATTAAAAGCTTATTATAATCAACCTAGTATTG
AATATAAAAATGTGACAGGTTATATCAGTTTCATTCAACCAAGTATTAAATTTATGAATATCATAGATGGTAATTCTGTT
AATAATATTGCTTTAATTGGCAAAGATAAGCAACATTATCATACGGGTGTACATCGTAATCTTAATATATTTTACGTTAA
TGAGGATAAGAGATTTGAAGGTGCAAAGTACTCTATTGGGGGTATCACGAGTGCAAACGATAAAGCTGTCGACCTAATAG
CAGAAGCAAGAGTTATTAAAGAAGATCATACTGGTGAATATGATTATGACTTTTTCCCATTTAAAATAGATAAAGAAGCG
ATGTCATTGAAAGAGATTGATTTTAAATTAAGAAAATACCTTATTGATAATTATGGTCTTTACGGTGAAATGAGTACAGG
AAAAATTACAGTCAAAAAGAAATACTATGGAAAGTATACATTTGAATTGGATAAAAAGTTACAAGAAGACCGTATGTCCG
ATGTTATCAATGTCACAGATATTGATAGAATTGAAATCAAAGTTATAAAAGCATAA

Protein sequence : 
MKMKNIAKISLLLGILATGVNTTTEKPVHAEKKPIVISENSKKLKAYYNQPSIEYKNVTGYISFIQPSIKFMNIIDGNSV
NNIALIGKDKQHYHTGVHRNLNIFYVNEDKRFEGAKYSIGGITSANDKAVDLIAEARVIKEDHTGEYDYDFFPFKIDKEA
MSLKEIDFKLRKYLIDNYGLYGEMSTGKITVKKKYYGKYTFELDKKLQEDRMSDVINVTDIDRIEIKVIKA