Name : SAUSA300_0039 (SAUSA300_0039)
Accession : YP_492759.1
PAI name : Type-IV SCCmec
PAI accession : NC_007793_R1
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : identified by match to protein family HMM PF06048
Homologs in the searched genomes : 37 hits ( 37 protein-level )
Publication :
-Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Complete genome sequence of USA300, an epidemic clone of community-acquired meticillin-resistant Staphylococcus aureus", Lancet 367 (9512), 731-739 (2006) PUBMED 16517273.
-Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Direct Submission", Submitted (11-FEB-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H., Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F., Sensabaugh,G.F. and Perdreau-Remington,F., "Direct Submission", Submitted (30-JAN-2006) Department of Medicine, University of California, San Francisco, San Francisco, CA 94143, USA.
| DNA sequence : | |
ATGAGTTACACATTGTTTGAAATTGGCCCATTTGCTTTAGATTCCTTCGGTTGGAAAGAAACGATACCACCTAAAAAAGA
TGGTGACAGTGAAAAAGTGGTTAGAATGGCTAGCCCTATTATTGTTAATGCAAGATTTTCTGATCCAATTACTGGTGTTG
AAAAGTTGATTATTACTAACAACAATGGTAAAAAAGACATTTTTGAGTCTGATATCTTAACAACACGAAACTTACCTTCT
TTAATTAAATATGGCTACAGTATTAACGAGAAGTATATTAGATCATTGAGTTATGCCTTGCAATTGATGCGAGATAGATT
ACCACTTTCTGAATTATATGAGGGTGTAGGTATACTAGAGACACCTTTTGGCTACTTGATATCGCTAGATAAAGTTCTCA
AATCTATTCAATTTAATCAGTCCTCACCTTCATACCCTATTGTAGATAGTGCTTATGACTTAACTCCTAAAGGTACATTT
GATAATTGGTTTAACATGTATATTGACGAGGTTAAAGGTCATCTTCTTTTAGAATTGGCAGTCATATTTGGGATTTCTGC
CTTAGTGACAAGTTTTCTGAAGCATAAACATGAAATCGAATTTGCAGGAATTCTCTTTAGTTTTACAGGTCAATCCTCAA
CCGGTAAGTCAACCGCAGCTGCTTTAGCTGTATCAGTCGCTGGTAACCCTACCAAAGGTAATGAAACTCTTTTTAGAAGT
TGGAATGCCACACGAAACGCACTTGAAGGTTATTTGAGTAACAATTATGGCATTCCTATAGTATTTGATGAGCTTTCATC
TACGACACTTAGAGATACCACGGGTTTGTTATATTCCATCGCTGAAGGTCAAGGTCGTCAACGTTCAAACGTTCATGGAG
AAGTTAAAACGCCTAAGAATTGGGGTACTTCTGTCATTTCAACGTCAGAATACAGTATTTTTAATGATTCAGCTCAAAAC
GATGGATTACGTGTAAGAACCATCGAGATTAATGAACAATTCACTACAAATGCGACCAATGCTGACAATATTAAAAAAGC
TGTAGCACTAAACTATGGTCATGTTTTACCGTTAGTAGCTAAATATCTTATAAATCGTGAAGATGAAGTTATTCAATGGT
TTTACAAGGAAGTAGATTGGTTTGAAGCTAAATTGAAAGATGAAACAAACAATACAGGTATTCGTATGTTTAAGCGTTAT
GCAGTCATTACAACATCTGCGAAAATATTAGGTCGTGTTTTATCTACAGATATTGATATCGCTAATATAAGAGACTACTT
TATTGATTATCATACTCATACAGTCTCTGAACGCTCATTAGCTGATAAAGCTATTGATGTCATCATTCAATTTGTGGCAC
AAAACAGAGGTAAGTTTTCAGATGAAGGTGCTTTGAAAAATATGTTTGAGAACTATGGATTAATCTCATTAAAAGATGAC
CATATCGAAGTAAAAATAATTGCGAACGTTTTTAAACAGATGCTAAACAATCATCAATTTCAAGATGTTAATAATGTTGT
CAACGCCTTAAGAGATAAAGGTTTCATATTAGCTGACCGTGGACGCCAAACAACTAAAAGAAGTGTCAAAGATAATAGCG
GTAAAAAACAATCACTTGTATTTTACCATCTAAAATTAGATGTAGAGTTTGCATCTATCCTCGGATTAACTAAAGATAAG
TCGTTACTTCAAAATTGGACACCGTCAAATGATAACAAAGCTGCGAAAGAACTTTTTAAATCCGCTAATGAAGGGATAGG
CCCTTCAGGAGTTCACGAAGATTTCTAA
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| Protein sequence : | |
MSYTLFEIGPFALDSFGWKETIPPKKDGDSEKVVRMASPIIVNARFSDPITGVEKLIITNNNGKKDIFESDILTTRNLPS
LIKYGYSINEKYIRSLSYALQLMRDRLPLSELYEGVGILETPFGYLISLDKVLKSIQFNQSSPSYPIVDSAYDLTPKGTF
DNWFNMYIDEVKGHLLLELAVIFGISALVTSFLKHKHEIEFAGILFSFTGQSSTGKSTAAALAVSVAGNPTKGNETLFRS
WNATRNALEGYLSNNYGIPIVFDELSSTTLRDTTGLLYSIAEGQGRQRSNVHGEVKTPKNWGTSVISTSEYSIFNDSAQN
DGLRVRTIEINEQFTTNATNADNIKKAVALNYGHVLPLVAKYLINREDEVIQWFYKEVDWFEAKLKDETNNTGIRMFKRY
AVITTSAKILGRVLSTDIDIANIRDYFIDYHTHTVSERSLADKAIDVIIQFVAQNRGKFSDEGALKNMFENYGLISLKDD
HIEVKIIANVFKQMLNNHQFQDVNNVVNALRDKGFILADRGRQTTKRSVKDNSGKKQSLVFYHLKLDVEFASILGLTKDK
SLLQNWTPSNDNKAAKELFKSANEGIGPSGVHEDF
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