Name : SH0041 (SH0041)
Accession : YP_251956.1
PAI name : SCCmec
PAI accession : NC_007168_R1
Strain : Staphylococcus haemolyticus JCSC1435
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : hypothetical protein, similar to lipopolysaccharide biosynthesis protein
Homologs in the searched genomes : 105 hits ( 105 protein-level )
Publication :
-Takahashi,M., Fukui,S., Baba,S., Ankai,A., Terui,Y., Fukuhara,Y., Oguchi,A., Hongo,Y., Yanagi-i,M., Watanabe,S., Takeuchi,F., Kuroda,M., Ito,T., Cui,L., Ma,X., Morimoto,Y., Yuzawa,H., Baba,T., Hiramatsu,K. and Isono,K., "Direct Submission", Submitted (19-DEC-2003) Mikio Takahashi, National Institute of Technology and Evaluation, Bio Technology Division Tohoku Branch; 4-5-18 Higashisendai Miyagino-ku, Sendai, Miyagi, 983-0833, Japan (E-mail:takahashi-mikio@nite.go.jp, URL:http://www.bio.nite..
-Takeuchi,F., Watanabe,S., Baba,T., Yuzawa,H., Ito,T., Morimoto,Y., Kuroda,M., Cui,L., Takahashi,M., Ankai,A., Baba,S., Fukui,S., Lee,J.C. and Hiramatsu,K., "Whole-genome sequencing of staphylococcus haemolyticus uncovers the extreme plasticity of its genome and the evolution of human-colonizing staphylococcal species", J. Bacteriol. 187 (21), 7292-7308 (2005) PUBMED 16237012.
-Takeuchi,F., Watanabe,S., Baba,T., Yuzawa,H., Ito,T., Morimoto,Y., Kuroda,M., Cui,L., Takahashi,M., Ankai,A., Baba,S., Fukui,S., Lee,J.C. and Hiramatsu,K., "Direct Submission", Submitted (04-JUL-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGACAATTTATAACTTGAATTTTGGAATTGGATGGGCAAGTAGTGGCGTAGAATATGCTCAATTATATAGAAGAAACAT
TTTTAAGTTAATGAAAGAAAACTTCAAGTTTATATATTTAGATTTTATACAAAAAGAAAATATTCAAACTCTTACTGAAA
ATCTTGGATTTGAAGATGATGAAATTATTTGGATCTATCAATACTTTACCGATATAAAAATTGCTCCTACAACTTATACC
ATACAAAATATAATAGATAGACTAGAGGATACTAATGTTGAAATTGAAAGAGTTAATAATAAAATAAAAAAAATCATTTT
CGGAAATGATAATAACTATATTCGTTGCTATTTAAAAAATGAAAGTGAAAATATAGTGGATAGAGCTGAATATGTTTCAA
AAGGGAAGCTCATAAAAAAAGAATTTTACAATTTTACAATCGTATTTACTGAATATTATGCGCCATATGAAAAAAAAGCT
AAATTATATTTGAGAACTTATTTTAATGAAGATGGTTCAATTGCTTATGAAGAACATATATCTGGTAAAAATAGTATCTT
TGTTTTTCCAAATGTAATATTGTATTCAAAATTAGAATTTATTGCTTACTTTTTAAGACAATTAAATCTTACTCGTGAAG
ATATACTTTTGATTGATAGGTCAAAAAATATAGGTCAGGTTATTTTAGAAAATAAAAATCAAGCTCGTTTAGGCGTAGTT
ATACATGCTGAACATTTTAACCATAGCAATACAAATGAGGATTATATATTATGGAATAATAATTATGAGTATATGTTCAA
CCATGTTGATTATATCGATTTTTTTATAACTGCAACTGATGCTCAGAAACAATTAATAGTAAATCAATTTAATCAATATA
AAAATAAAAATCCAAAAGTGTATACTATACCTGTTGGTAGCCTTAAAGAATTAAAATATACTCATGAAAGAGCTTCTAAT
AGTATAATGACTGCTTCAAGATTAGCTAAAGAAAAACATGTAGATTGGCTAATTGAGTCTGTTGTTCAAGCGCATAAAAC
AAGACCTTCTATAAAGTTTGATATTTATGGTGAAGGTGCAGAAAAAAATAATCTTCAAAAATTAATTAATGAGAAAGAAG
CAAATGAGTATATTAAATTAAGAGGTCACAAGAATTTAGAAGAAATATATAAAAAGTATCAGCTATATTTGTCAGGATCT
ACAAGCGAAGGATTTGGATTGACCCTAATGGAAGCAATTGGATCGGGCCTAGGAATTATAGGATTTGATGTTAATTATGG
AAATACAACTTTTATTAAAGATAGGTATAATGGTTATCGTATTCCTGAGTCGATAAAAAATCAAGGAACTAAAGAAATAG
CTACAAAATTTGCGGAAAAGATAGATGAATATTTTGTAAGTTCAAATAAAATTGATCAAATGAGTCATGAATCATATTTA
ATTGCTGATGATTTTCTTCTTAACAATTGCAAAGAAAAGTGGTTAAGTTTAGTAAATGAGGTGCAAGATGATTAA
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| Protein sequence : | |
MTIYNLNFGIGWASSGVEYAQLYRRNIFKLMKENFKFIYLDFIQKENIQTLTENLGFEDDEIIWIYQYFTDIKIAPTTYT
IQNIIDRLEDTNVEIERVNNKIKKIIFGNDNNYIRCYLKNESENIVDRAEYVSKGKLIKKEFYNFTIVFTEYYAPYEKKA
KLYLRTYFNEDGSIAYEEHISGKNSIFVFPNVILYSKLEFIAYFLRQLNLTREDILLIDRSKNIGQVILENKNQARLGVV
IHAEHFNHSNTNEDYILWNNNYEYMFNHVDYIDFFITATDAQKQLIVNQFNQYKNKNPKVYTIPVGSLKELKYTHERASN
SIMTASRLAKEKHVDWLIESVVQAHKTRPSIKFDIYGEGAEKNNLQKLINEKEANEYIKLRGHKNLEEIYKKYQLYLSGS
TSEGFGLTLMEAIGSGLGIIGFDVNYGNTTFIKDRYNGYRIPESIKNQGTKEIATKFAEKIDEYFVSSNKIDQMSHESYL
IADDFLLNNCKEKWLSLVNEVQDD
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