Name : hrpF (XOO0066)
Accession : YP_198705.1
PAI name : Hrp PAI
PAI accession : NC_006834_P1
Strain : Xanthomonas oryzae KACC10331
Virulence or Resistance: Virulence
Product : HrpF protein
Function : -
Note : -
Homologs in the searched genomes : 13 hits ( 13 protein-level )
Publication :
-Lee,B.M., Park,Y.J., Park,D.S., Kang,H.W., Kim,J.G., Song,E.S., Park,I.C., Yoon,U.H., Hahn,J.H., Koo,B.S., Lee,G.B., Kim,H., Park,H.S., Yoon,K.O., Kim,J.H., Jung,C.H., Koh,N.H., Seo,J.S. and Go,S.J., "The genome sequence of Xanthomonas oryzae pathovar oryzae KACC10331, the bacterial blight pathogen of rice", Nucleic Acids Res. 33 (2), 577-586 (2005) PUBMED 15673718 REMARK Publication Status: Online-Only.
-Lee,B.M., Park,Y.J., Park,D.S., Kang,H.W., Kim,J.G., Song,E.S., Park,I.C., Yoon,U.H., Hahn,J.H., Koo,B.S., Lee,G.B., Kim,H., Park,H.S., Yoon,K.O., Kim,J.H., Jung,C.H., Koh,N.H., Seo,J.S. and Go,S.J., "Direct Submission", Submitted (04-FEB-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Park,D.S., Kang,H.W., Park,Y.J., Kim,J.G., Go,S.J., Hahn,J.H., Lee,G.B., Kim,H., Park,H.S., Yoon,K.O., Kim,J.H., Jung,C., Koh,N.H., Seo,J.S. and Lee,B.M., "Direct Submission", Submitted (23-SEP-2004) National Institute of Agricultural Biotechnology, Rural Development Administration, 225 Seodundong, Suwon 441-707, Republic of Korea.
| DNA sequence : | |
TTGCGCTTTTTTCGCCAAAATAGTTCGTCGGCCAGAGTGCACGTTGCGCAAATGGGCAACATACGTCTACACCGCATGGG
CGGATCCGTGCGGCCGTATAAGTATAAACTTATACGAAGGTGCTCTGCCAATTCTGTCATTCGCGAGGCCGCCTATATGT
CGCTCAACATGCTTTCTACCGGGAGCAACCCCAGCCAACTGCTGGGCACCTCTTCCAACGAATCGTCTTCATCGGAACTG
TTCGGGTCGGATTCGTCCAACGATGGCTCCGACCTGCCATCGACGATGGATACCATCTTTCAGCAAATCTACCTATTGCT
GGCGGCCCTTCAGGCCAACACGCAAACCAGTGCATCCGGTGATACGCCGGCCAATACGGCAAGCGGCGATGCTGACACAC
AGATGTCCGCATCGGACTGGCAGGCCACCCAGCCGATCGAAAAGCGCACCTCCTGGCCATCCCTGGGCTACGACTTCGAT
CCCAAGAACATCAAGGGGAAGGATGCGCCGCCGGCGCTGGAGGGGTCGACGGTTACCTGGAACGATGGCACGCTGACCAA
GTCTGAGCTTCAGATCGTTTCGACGCTGAATGCACACAAGGATCAGATGCCGATCGAGTACAAGAATCTCGACGACAAGA
TCAACGACCCTTCCACGCCCCCCGACCTGAAGGCTGCATTGCAGGGCCTGAAACAGGACCCGCGATTGTTCTTTGCGATC
GGTTCTCAGGGAGACGGCAAGTGCGGCGGCAAGGTCAGTGCGCAGGATCTGTGGGATTTCTCTGATTCACATCCGCAGGT
CAAGGACCTGGGCGGAAAGAACGATGAGTTCAATCCCAAGGACATCAAGGGGTCCAACCCGCCACAGGCGGCGGAGGGCT
CGACGGTTACCTGGAACGACGGCCAGCTCAATCAATCCGAACTGGAGATTGTTTCGGTTCTGGATCGGCACAAGGACCAG
GTCGACTCGCTGTCCTTCGATCAGCTGGATGCCAAGATCAACGACCCGTCGACGCAGCCTGACTTGAAGAAAGCGCTGAA
AGGATTGCAGAAGGATCCGCGGTTGTTCTTCGCCATCGGCTCGCAGAAGGACGGCAAGTGCGGCGGCAAGATCAAGGCGC
AGGACCTCACAGACTTCTCGTACTACCATCCGCAGATTGCCGAATACAACGACAAGAAGGCAAAGAGCTACACGCAGAAC
TACATCGCATCCGATAGCCCCGACAAAACCAAGGCGTCGGTCATGACCAAAAGCGATGCCCTGCGCGAGATGTATCGCTA
TTCCGACTATCTGCCCGGCAACCTGAGTGAGGACGAATTCGCCAAGATCGTCGATGGCGACAGCAAGACCGGCAAGTGCC
CACCGCAGTTGATCGCGGCTGCTCAATATTTTCGCGATCATCCGGACGAGTGGAAGGAATTTTCAGGAGACGCCGGCACG
ATGAGCACGCCGGACTTCCTGCAGAAGTCCACCTCCGAGATGCACCTGACTGCGGACGAGCAGAAGACGCTGGACACCAT
CAACAGTCATCAGGACGCGTTCTACGGCGACGGCAAGGAACTCACGCGCGACAAGCTCGACGCGATCTCCAAGGACAACA
AGGCCGACCCGGCGGTCAAAGAGGCCGCAACACAGTTGGCGTCCGATCCGCTGCTGTTCGGCTTGTTGAACAACTCGATC
ACCGGCTACAAGAAACCCCATCACTTCTTCGGCGGCGGCCATGTCGTCGATTCGGGCAAGATCAGCCAGAACGATTTCCG
GCAGTTCTATGACCACATGAGTGCAGCCAACAAGACCGTGAACACGCCGGCCACGCACGAGGCGAGCTCGCCCGATCAGC
AAAAGGCCGTCGCGGACATGCTGATGGGCAAGGACGATCCGCCGGCGATCAAGAAGCCCAAAAAGGATGTCGGCACGTTC
CAACAGGGCCTGCATGAGTTCCTCAAGTGGGACAGTAAGATCCTGGACTGGATGTCGGTCGGGCTCAGCGCATTGAACGG
AATTCCCGTGATCGGCGAGATTGCCGATGCGGCGGCGATTGCATTGGAGAGCGAGGCGCAGGCGGCGCAGGTGGTCGACA
CTGCGATTCAAGGTGGCGACATGTCGCTTGCCTTGAAGCTGGCCGGCATCAACATGGCCGGGGCAGTGGTTGGAGCAGTC
GGTGGACCCACGGCCAGAATCGGGGCCAAGGGCGCCGCCAAGGGCGTCGCCGAAGTCGCGGCCAAGGAAGCCGCCGAGGG
CGCGGCCAAAGGAACTGCAAAGGGAGCTGCCAAAGGCGCAGGTAAAACCGCGGCCGAACGGCCCAGCGCCGCTGCGTTCG
CAAAAGGCTACGTGGCCGGCAGCACCATCAGTAAATCGACTGAAATTCTCAAGAAGCCCGTCATGGCGGGCTTGCACTAC
GAAGAATATCAGCTGGACAAGCAGAAGGACGGAGAGATCCACCAGAAGCTGGACAACGCCGGCGGCGCCCCGGTGGGTAG
GCAGATTATCCCCACAGGCATCGCCGACAACTTCGAGGGAGACGTGCGGCAGAATCTGCGCAATGTCAGGATACGTCGCA
GATAA
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| Protein sequence : | |
MRFFRQNSSSARVHVAQMGNIRLHRMGGSVRPYKYKLIRRCSANSVIREAAYMSLNMLSTGSNPSQLLGTSSNESSSSEL
FGSDSSNDGSDLPSTMDTIFQQIYLLLAALQANTQTSASGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFD
PKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQGLKQDPRLFFAI
GSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPPQAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQ
VDSLSFDQLDAKINDPSTQPDLKKALKGLQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQN
YIASDSPDKTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHPDEWKEFSGDAGT
MSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDAISKDNKADPAVKEAATQLASDPLLFGLLNNSI
TGYKKPHHFFGGGHVVDSGKISQNDFRQFYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGKDDPPAIKKPKKDVGTF
QQGLHEFLKWDSKILDWMSVGLSALNGIPVIGEIADAAAIALESEAQAAQVVDTAIQGGDMSLALKLAGINMAGAVVGAV
GGPTARIGAKGAAKGVAEVAAKEAAEGAAKGTAKGAAKGAGKTAAERPSAAAFAKGYVAGSTISKSTEILKKPVMAGLHY
EEYQLDKQKDGEIHQKLDNAGGAPVGRQIIPTGIADNFEGDVRQNLRNVRIRRR
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