Name : SERP1513 (SERP1513)
Accession : YP_189078.1
PAI name : phi_SP_beta
PAI accession : NC_002976_P2
Strain : Staphylococcus epidermidis ATCC 12228
Virulence or Resistance: Not determined
Product : truncated ribonucleoside-diphosphate reductase 2, alpha subunit
Function : -
Note : contains a 384 residue intein; identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM TIGR01443; match to protein family HMM TIGR01445; may be nonfunctional due to interuption
Homologs in the searched genomes : 3 hits ( 3 protein-level )
Publication :
-Gill,S.R., "Direct Submission", Submitted (20-OCT-2004) The Institute for Genomic Research, 9712 Medical Center Dr, Rockville, MD 20850, USA.
-Gill,S.R., "Direct Submission", Submitted (08-APR-2002) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Gill,S.R., Fouts,D.E., Archer,G.L., Mongodin,E.F., Deboy,R.T., Ravel,J., Paulsen,I.T., Kolonay,J.F., Brinkac,L., Beanan,M., Dodson,R.J., Daugherty,S.C., Madupu,R., Angiuoli,S.V., Durkin,A.S., Haft,D.H., Vamathevan,J., Khouri,H., Utterback,T., Lee,C., Dimi, "Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain", J. Bacteriol. 187 (7), 2426-2438 (2005) PUBMED 15774886.
| DNA sequence : | |
TTGAGTAAATGGATCGAAAAAAACAATGAAATCATGAGAAGAGATGAGTTAGGACAGCTTAGCTTATCAAAAGACAAAGA
AGCAATTAAGTTATATTTAGAACACATTAAGAGTAAAACAAAGCAATTCTCAAATCAGATTGCAAGATTACGTTACTTAG
TAGAAGAAGATTACTATATTGATGTATTTAAAGATTACAGTGAAGAAACATTATTAGAGCTTTTAGATTATGCTTATTCA
TTCGGCTTTGAGTTCCAAAGCTTCATGGCAGCAAGCAAATTCTATGATACATACGCATTAAAAACTAGAGATAAGTCGCA
ATGGCTTGAAGACTTTGAACAACATAACGTAATCGTTTCTCTGTACTTAGCTGGTGGAGATGTTGATTTAGCTAAAAGAT
ACATTAAAGCACATACACTTCAAACAGTACAAACAGCAACTCCAACATATTTAAATGCTGGTCGTAAGCAACGAGGAGAA
TTAGCTTCTTGTTATTTATTCACAATGGATGACACATTAAACTCTATCAACTTCATTAGAAGTCAAGTATCACAAGCTAG
TAAGATTGCTGGTGGTGTAGCAGTTAACTTAACACGATTAAGAGGTCGTGGTGCTACATTAAAAGGTGTTAAGAATGTAG
GTAAAGGTATCGTACCAGTTGCTAAATTAATTGAAGGTGAAGTTAGTTATGCTGATCAATTAGGTCAACGTGCTGGAGCT
GGTGCTGCTTACTTAAACATTTTCCACTCAGATGTAATTGAGTTATTAAACACTAAGAAAGTTAATGCAGATGAAGATAC
ACGTTTAGCTACACTTTCAATCGGTTTAATTGTTCCTTCATTATTCTTTGATTTAGCAAAAGAAGACAAAGACTTATATA
TGTTTGAACCATACTCAATTCAAGAAGAATTCGGTAAAGATGTAATCTTAGATGACATTAATATTAATGATTGGTATGAC
AAGTTCGTTGAGAATGAAAATGTTATCAAACATAAAATTAATGCTAGAGAAATGTTAAATCTGATCGCTCAAATTCAATT
ACAATCTGGTTATCCTTATATCATGTATAAAGATAACGCAAACAAAAACCATGCTTTAAATGAGCTTGGTGAAATCAAAA
TGTCTAACTTATGTGTTACTGGAGACACTGAGTTATTAACTGAAAAAGGTTATGTGAAAGCCAAAGACTTGTATGAAAGT
CAAGAAGATTTGAAAGTAGTAATTGATAATAGAACTAAGAATTATGATATTAACAATAAAGGTACTGATATCGTAAATGC
TATTCCAATGCAACTTACAGCTAAACAAGCTGAAATTTATGAAATTACTACTAAACAAGGGTTTAAAATTAAATCTACCG
AATGGCACAAATATTATAGAAAAATAAACGACTCAATTGAAAAAGTTCAGTTAAATCAATTAGAGGTAGGAGATAAGCTA
TTAGTTCAATCTGGTAATGGAAGTTATGGAGATTTTCATGATCCAAAATTAGCATTCTTGATGGGGCTTATCGCTGGAGA
TGGGACATTTGGAAGAGACGGTTCAGTTAAAATTTATCTATATCACGAGAAGCAATATCTTAAAGAAACTATTGAAGAAT
TAGTAGCTTATATTATAGATAAATATAGAAATAAAAATGAGTTTTTACATCATAGTGCAAACTTACATCCTAAATTTGTT
GAAAATAAAGAACTACAAAAATTAACAATTAGCAGTGTTGAGCTATACAAAATATTATCTAGATTTGGATTTAACAGAGA
GACTAAATTGAGATTTCCAAACTTATTAAAAAATGCTACAAAAAATACAATAACTGCTTATTTATCTGGCTTATATCAAA
TGGATGCTTGCGTAAATACAAATGAAAAATATAAAGCAATGAGCATCGAATTGACAACAATCAGTGAAGAATTAGCAAGA
GATATTCAAATGCAACTGTTAAATCTCGGTGTGTATTCATCAATATATCAAAGTGAGAGAGAGATAAGCTTATTACCAGA
TGGTAATGGCGGCATGAAAGAGTACAAAGTTCAAAATACATATAAAATTAGCATTCAAGACAGAAGCTCAAGAGATTTGT
TTATGAAAGAAGTAGCTTTGAAACCTAAAGATATACATAAAGCAATGATTTTTAACTTAACATTGCGACCAAATAGTAGA
AAACCGAAACATGATTTTACTGCCGAAATTACTGAAATTAAATATATTGGTAAAGAAGATGTTTATGATACCACACAAGA
AGATTATCACTCATTAATCTTCAATGGAATTGTGACAGGAAATTGTACTGAGATCTTCCAATACATGCATGTTTCAGATA
TCAAAGATTACTACGAACCAGATGAATTAGGTCAAGATATTATCTGTAACTTAGCTTCTCTTAATATGGTTAAATCAATC
GAAGAGAAAGAAATTGAAGAGTCAATTCGTACTGGAATGAGAGCTTTAACGTTTGTAGCTAACAATTCACGTATCGAACA
CTTACCAACAGTTCATAAAGCAAATAAAAACAATAGAGCAGTTGGTTTAGGTGTAATGTCATTCCATAGTATGTGTGCTA
AAAACAAAATTAGATATGGTTCAGAAGAGTCACTTGATTTGCTAAATGTTTACTGCATGATGATGGACTATTATTCATTA
GACGAGTCAATGAAGATTGCAGTTGAAAGAAATGACAAATTCTATGGCTTTGATCAAACAGATTATAAAGCTAAAGATGG
AAAAGAGTTTGGAGAATACTTCTATAAAAACAATCGTGTAACTAAGAATGTAGAACCAATTACTCCGAAAGTTAAAGAGA
TTTTTAAAGGTATTTACATTCCTACTAAAGAAGACTGGCAACGGTTAGCTAGAGAAGTTGATAAGAATGGTTTATATAAC
TCATATAGATTGTCAATCGCACCTTATTGA
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| Protein sequence : | |
MSKWIEKNNEIMRRDELGQLSLSKDKEAIKLYLEHIKSKTKQFSNQIARLRYLVEEDYYIDVFKDYSEETLLELLDYAYS
FGFEFQSFMAASKFYDTYALKTRDKSQWLEDFEQHNVIVSLYLAGGDVDLAKRYIKAHTLQTVQTATPTYLNAGRKQRGE
LASCYLFTMDDTLNSINFIRSQVSQASKIAGGVAVNLTRLRGRGATLKGVKNVGKGIVPVAKLIEGEVSYADQLGQRAGA
GAAYLNIFHSDVIELLNTKKVNADEDTRLATLSIGLIVPSLFFDLAKEDKDLYMFEPYSIQEEFGKDVILDDININDWYD
KFVENENVIKHKINAREMLNLIAQIQLQSGYPYIMYKDNANKNHALNELGEIKMSNLCVTGDTELLTEKGYVKAKDLYES
QEDLKVVIDNRTKNYDINNKGTDIVNAIPMQLTAKQAEIYEITTKQGFKIKSTEWHKYYRKINDSIEKVQLNQLEVGDKL
LVQSGNGSYGDFHDPKLAFLMGLIAGDGTFGRDGSVKIYLYHEKQYLKETIEELVAYIIDKYRNKNEFLHHSANLHPKFV
ENKELQKLTISSVELYKILSRFGFNRETKLRFPNLLKNATKNTITAYLSGLYQMDACVNTNEKYKAMSIELTTISEELAR
DIQMQLLNLGVYSSIYQSEREISLLPDGNGGMKEYKVQNTYKISIQDRSSRDLFMKEVALKPKDIHKAMIFNLTLRPNSR
KPKHDFTAEITEIKYIGKEDVYDTTQEDYHSLIFNGIVTGNCTEIFQYMHVSDIKDYYEPDELGQDIICNLASLNMVKSI
EEKEIEESIRTGMRALTFVANNSRIEHLPTVHKANKNNRAVGLGVMSFHSMCAKNKIRYGSEESLDLLNVYCMMMDYYSL
DESMKIAVERNDKFYGFDQTDYKAKDGKEFGEYFYKNNRVTKNVEPITPKVKEIFKGIYIPTKEDWQRLAREVDKNGLYN
SYRLSIAPY
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