Name : pdpB2 (FTT_1700)
Accession : YP_170605.1
PAI name : FPI
PAI accession : NC_006570_P2
Strain : Francisella tularensis F92
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : Similar to AAP58967.1 (Q7X3J0) PdpB from Francisella novicida (1093 aa). BLAST Score = 1914 bits (4959), Expect = 0.0 Identities = 975/1093 (89),Positives = 988/1093 (90). This protein is identical to FTT1345. It is part of the duplicated region 1767715..
Homologs in the searched genomes : 30 hits ( 30 protein-level )
Publication :
-Duffield,M.L., "Direct Submission", Submitted (20-MAY-2009) Duffield M.L., Biomedical Sciences, Defence Science and Technology Lab, Porton Down, Wiltshire, SP4 0JQ, UNITED KINGDOM.
-Duffield,M.L., "Direct Submission", Submitted (25-JUN-2004) Duffield M.L., Biomedical Sciences, Defence Science and Technology Lab, Porton Down, Wiltshire, SP4 0JQ, UNITED KINGDOM REMARK revised by [3].
-Larsson,P., Oyston,P.C., Chain,P., Chu,M.C., Duffield,M., Fuxelius,H.H., Garcia,E., Halltorp,G., Johansson,D., Isherwood,K.E., Karp,P.D., Larsson,E., Liu,Y., Michell,S., Prior,J., Prior,R., Malfatti,S., Sjostedt,A., Svensson,K., Thompson,N., Vergez,L., Wa, "The complete genome sequence of Francisella tularensis, the causative agent of tularemia", Nat. Genet. 37 (2), 153-159 (2005) PUBMED 15640799.
-Larsson,P., Oyston,P.C., Chain,P., Chu,M.C., Duffield,M., Fuxelius,H.H., Garcia,E., Halltorp,G., Johansson,D., Isherwood,K.E., Karp,P.D., Larsson,E., Liu,Y., Michell,S., Prior,J., Prior,R., Malfatti,S., Sjostedt,A., Svensson,K., Thompson,N., Vergez,L., Wa, "Direct Submission", Submitted (13-AUG-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGAATTTTATTAAAAATCATCAAATATTAATAATTTCACTAACTATAGCAATAATTGTTTTATCAGTACTTGGTATTTT
TATGATTAAAAAATGGCTTAAAACATCAAGAAATCCTAACAAAAAATCTGCCTCAAAGACCATAAAAAATGCAAAATCAT
TGATCAAAAAGAATAAAGTAAAAAACAACTTAAGTGAATTGTATATTTTCTATGGGGACTATCTGGCAGCTAAAGATTAT
ATAACAAAGATAAAACCTCAAGCTCAAATCATTGATAATAATGAACTCCCTTTAATAGCTATTGATAAAAACAATACATC
TCTCGTATTTGCAAATAATGAATTTTCGTACCTATATAAGTTAAAAAAGAAACTAAATCTACAATTTTATAAGCTTAACT
TTTGCTTCGATATATCCAATGATTACTACCATGAAAATATCAAAATTAGTGAAATCTATAAAGAACTATTAAAATTAAGA
TTAAAAAACTTCATAATATCTTTTTACACCTTATCTGAGCATACTAGAAGCTATAATAATGCAATTGATAAAAAATCAAT
ATTTAAATTAACTTCTGATGCGGATACAAATCATAAAGCTGAAGAGGAAATATTATCAAAAATTCTTAGCTCTAAAGATG
ATGTTAATAATAAATACAATAATGTTAAGATATTAAATCAAATAAGAAGGTGGCTAAAAAACATCCACCCTCAATTAAAA
TCCATAAATAAAGAAACATTCTTTAATTTTGGGCTAAACACACCAGATAATATCATAGCCAAGAAAGATACAATATTTTT
TAGCAGCTCTCCAAAAAGTATTATCATAAACTTAATATCTTTGTTATTTAGTTTTATATTTATCGTTAATATTTTTCAAG
AAATTAACATTAAAGAAAAATTCTCTATACAAGAGCTTAATCAACTACATGAAAGCGACTCTAATAAAATAATAGAAGAA
ACTAGAAAAAAAATTGATGAGGCTATACTTCTAGATATCCTATATCCGAAATCGATAAAATATCATTTCATATACGAACA
ATATGCTGATACTCTCCTAAAGAATGTAATCTTACCAAAATATAATGATACATATGACTTATCAATGATTACATCATTTT
TAATATTTTTTGAGTATTTGGATAACAAAATTATTAACCAACATACGAATAGAATACTTAAAATAATAAGCAGTATCACC
AACCTATCTGAAAAGCAGCTAGATATCGTGATCAAGTATACGACCCCAAGTATAAGAACTGAAATGATTAAGTCAGCCAT
CAACAGAGCAAATAAACTTTATACAAATCGTTTAATAGTTGTAGGTGAAGACTCCGAAAGTTACTTAAGTACTAAAGGAT
TTAATGCTGAATACTTAGGGATTTCAAATACTAAAAGAGCGAAGGTCATAAATAATATTTATATACAATACCTATATAAA
TGTGCTACAGATAATGCAATTTTAGATTTAAACGATAACTACATAATACCAATAGAAGTAAATAATATCTTCAAGATGTA
TCAAGAGCAATTTGACACATCCTCTAAAAAGCTATGTAACTCATCATATATTAACTCTATTACAAAGAGCGTTTCTTTGA
TACTTAATCAAGAGGAAAATAAAAGAAAATTTGAAAGCTTCAGTGATATGCTAGACCATATCTATTATTTAGTAAAATCA
TTAGAAAAAAATGCTAAAGATGTCGCAGATGATGGTAAAAAACAAACTAGCTCGATAACAGTATCGCTTATAAATTACGT
TATAAATAGTGTTGTCAACCCTACTTATAATAAAAATGAGCTCCCACTAATAAGTCCAGTAAGTAAAAACCTATATATGG
AGTTTGCTCCTAATTTCTATAGTAAAAGAATACTTATCTCTCCAATATACTCAAAAGAATATATTAAAGATAATATAGAT
CCTACAAATAAAAAGTTTAATAGACTCATCAATAATCTAAAGGATAACTTCAATATAGAACCCGACTTTATGATTGCTAT
CTATAAAAGTTCTATAAATAACTACATTGAGAAATATATAGGATCCTATAATAAGATGATTGATAGCCTTAATAATGACT
CTGAATTTAACAAAAATATATCTAACAAGGGTGCTCTTAAATTATATTTGCTAGCAATGTCATCAAAGGATTCTTCCTTT
AATAGCCTAATAGAGTTTTATAGCACTAATACAGACCTAATAACTAATGAATCCGAAACCAATTCATCTAAAAAGATAAA
TAAGCTTCAACATTTTTATGGAGAAATAACTAAATTAAACAAACAAAACAATACTAATGATCAAAATGATAAGTCATTGT
GGGCGCCTATAGATAACTACTTTAAAGAAAACGATAAATATCTTGAGTCTAAGAGTTATGCCGACTATAAAAACATATTT
AAACAGTTAAATAATCTAATAATAGAACAAGGCTATTCAAGTACATATAAAAATATCAAACAAGGATATGAACCACTACA
AAAAGTTTACTCTGAACTTTCTAAGATAAATAATCATCAAGGTAATAATAACTTATATAAACTGTTGAAGAAACATCTAG
ATATTGCCATTAATACTATAAAAACTATCGCCATACAAGATGCTATAACTAAACTTGATAATACTGTCAATATTGAGTAC
GAATACATAAATAATCAATTCCCTTTTAATAAGGATAGTAACTCGGCTGCAACAAATGAAGCTATAACCAAAGACTTTGA
TAACAATGGTTATATATACTCTGGATTTATAGAGCAACTATCTCCACTACTTTCTTATAATAAAACTGATGATAGATGGG
AAAGTAAAGATTTTTCAAAACCTGAGGAAATAGACTATCTAAATAAATTCAATAAGGTATATCTTTTAAATAAGCTACTA
TGGGATGATAAAAGAAATCCAAAAGCTATAAAATTTGATATAACTCCTATACCAAACAAAGATAATGATTATACATTTTT
TAGCATAATCCTCGATAAGCAAAACTATGTAAACTCATTAAACATAAAATATTCAGATAGTATTGAAGTTTTGTACAACT
GGAATTCACTTGAGTCAACAACTATTACCATAAAATTTGAGGATGGTAGTAATGAGCAAATAAGCTATCAAGGAAAATGG
TCTATATTAAAAGCAATTAAAGACGCAAATTGTGATCAAAACAATATTTGTACCTGGGTAATCAAGCACAAAGGTAAAAA
ATATCCTTTAAGCTTCAAAATAGAATCAAAATTCTTACAAGTATTAGGATGGCAAAAACAAGGAGAAGTCAATGTACAAT
AA
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| Protein sequence : | |
MNFIKNHQILIISLTIAIIVLSVLGIFMIKKWLKTSRNPNKKSASKTIKNAKSLIKKNKVKNNLSELYIFYGDYLAAKDY
ITKIKPQAQIIDNNELPLIAIDKNNTSLVFANNEFSYLYKLKKKLNLQFYKLNFCFDISNDYYHENIKISEIYKELLKLR
LKNFIISFYTLSEHTRSYNNAIDKKSIFKLTSDADTNHKAEEEILSKILSSKDDVNNKYNNVKILNQIRRWLKNIHPQLK
SINKETFFNFGLNTPDNIIAKKDTIFFSSSPKSIIINLISLLFSFIFIVNIFQEINIKEKFSIQELNQLHESDSNKIIEE
TRKKIDEAILLDILYPKSIKYHFIYEQYADTLLKNVILPKYNDTYDLSMITSFLIFFEYLDNKIINQHTNRILKIISSIT
NLSEKQLDIVIKYTTPSIRTEMIKSAINRANKLYTNRLIVVGEDSESYLSTKGFNAEYLGISNTKRAKVINNIYIQYLYK
CATDNAILDLNDNYIIPIEVNNIFKMYQEQFDTSSKKLCNSSYINSITKSVSLILNQEENKRKFESFSDMLDHIYYLVKS
LEKNAKDVADDGKKQTSSITVSLINYVINSVVNPTYNKNELPLISPVSKNLYMEFAPNFYSKRILISPIYSKEYIKDNID
PTNKKFNRLINNLKDNFNIEPDFMIAIYKSSINNYIEKYIGSYNKMIDSLNNDSEFNKNISNKGALKLYLLAMSSKDSSF
NSLIEFYSTNTDLITNESETNSSKKINKLQHFYGEITKLNKQNNTNDQNDKSLWAPIDNYFKENDKYLESKSYADYKNIF
KQLNNLIIEQGYSSTYKNIKQGYEPLQKVYSELSKINNHQGNNNLYKLLKKHLDIAINTIKTIAIQDAITKLDNTVNIEY
EYINNQFPFNKDSNSAATNEAITKDFDNNGYIYSGFIEQLSPLLSYNKTDDRWESKDFSKPEEIDYLNKFNKVYLLNKLL
WDDKRNPKAIKFDITPIPNKDNDYTFFSIILDKQNYVNSLNIKYSDSIEVLYNWNSLESTTITIKFEDGSNEQISYQGKW
SILKAIKDANCDQNNICTWVIKHKGKKYPLSFKIESKFLQVLGWQKQGEVNVQ
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