PAI Gene Information


Name : set3 (SAR0427)
Accession : YP_039879.1
PAI name : vSa_alpha
PAI accession : NC_002952_P2
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Virulence
Product : superantigen-like protein 5
Function : -
Note : SSL5, SET3, SET10; bind P-selectin glycoprotein ligand-1 and inhibit P-selectin-mediated neutrophil rolling along the endothelium; these proteins share structural homology to known superantigens but do not exhibit any of the properties expected such as hi
Homologs in the searched genomes :   176 hits    ( 176 protein-level )  
Publication :
    -Holden,M.T.G., "Direct Submission", Submitted (23-JUN-2004) Submitted on behalf of the Pathogen Sequencing Unit, Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, E-mail: mh3@sanger.ac.uk.

    -Holden,M.T.G., Feil,E.J., Lindsay,J.A., Peacock,S.J., Day,N.P.J., Enright,M.C., Foster,T.J., Moore,C.E., Hurst,L., Atkin,R., Barron,A., Bason,N., Bentley,S.D., Chillingworth,C., Chillingworth,T., Churcher,C., Clark,L., Corton,C., Cronin,A., Doggett,J., Do, "Complete genomes of two clinical Staphylococcus aureus strains: Evidence for the rapid evolution of virulence and drug resistance", Proc. Natl. Acad. Sci. U.S.A. 101 (26), 9786-9791 (2004) PUBMED 15213324.

    -Holden,M.T.G., Feil,E.J., Lindsay,J.A., Peacock,S.J., Day,N.P.J., Enright,M.C., Foster,T.J., Moore,C.E., Hurst,L., Atkin,R., Barron,A., Bason,N., Bentley,S.D., Chillingworth,C., Chillingworth,T., Churcher,C., Clark,L., Corton,C., Cronin,A., Doggett,J., Do, "Direct Submission", Submitted (11-SEP-2004) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.

    -Kenny,J.G., Ward,D., Josefsson,E., Jonsson,I.M., Hinds,J., Rees,H.H., Lindsay,J.A., Tarkowski,A. and Horsburgh,M.J., "The Staphylococcus aureus response to unsaturated long chain free fatty acids: survival mechanisms and virulence implications", PLoS ONE 4 (2), E4344 (2009) PUBMED 19183815 REMARK Publication Status: Online-Only.


DNA sequence :
ATGAAGATGACAGCAATTGCGAAAGCCAGTTTAGCTCTAAGTATTTTAGCGACTGGGGTTATAACATCAACGGCTCAAAC
TGTAAATGCGAGCGAACATGAATCAAAATATGAAAATGTGACAAAAGATATCTTCGACTTGAGAGATTACTATAGTCGCG
CAAGTAAGGAACTTAAAAATGTTACTGGCTATCGTTATAGCAAAGGTGGCAAGCACTACCTTATCTTTGATAAAAATAGA
AAGTTCACAAGAATACAAATTTTTGGTAAAGATATAGAAAGGATTAAAAAACGTAAAAATCCAGGATTAGATATATTTGT
AGTTAAAGAAGCGGAAAATCGCAACGGCACAGTGTATTCATATGGTGGCGTTACTAAGAAAAATCAAGGCGCTTACTATG
ATTACTTAAGCGCACCTAGATTCGTTATTAAAAAAGAAGTAGGTGCAGGTGTTTCTGTGCATGTTAAAAGATACTACATT
TATAAGGAAGAGATTTCGCTGAAAGAACTTGATTTTAAATTACGACAGTATTTAATTCAAGATTTTGATCTGTATAAAAA
GTTTCCTAAAGCTAGCAAGATAAAAGTGACAATGAAAGATGGCGGCTATTATACGTTTGAACTCAATAAAAAGTTACAAA
CAAACCGAATGAGTGACGTCATAGATGGCAGAAATATTGAGAAAATAGAAGCCAATATTAGATAA

Protein sequence :
MKMTAIAKASLALSILATGVITSTAQTVNASEHESKYENVTKDIFDLRDYYSRASKELKNVTGYRYSKGGKHYLIFDKNR
KFTRIQIFGKDIERIKKRKNPGLDIFVVKEAENRNGTVYSYGGVTKKNQGAYYDYLSAPRFVIKKEVGAGVSVHVKRYYI
YKEEISLKELDFKLRQYLIQDFDLYKKFPKASKIKVTMKDGGYYTFELNKKLQTNRMSDVIDGRNIEKIEANIR