Name : pre (SAR0031)
Accession : YP_039506.1
PAI name : Type-II SCCmec
PAI accession : NC_002952_R1
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : plasmid recombination enzyme
Function : -
Note : Identical to Staphylococcus aureus plasmid (pUB110) recombination enzyme Pre SW:PRE2_STAAU (P22490) (420 aa) fasta scores: E(): 3e-135, 100.000% id in 420 aa, and highly similar to Staphylococcus cohnii plasmid (pIP1714) recombination/mobilization protein
Homologs in the searched genomes : 13 hits ( 13 protein-level )
Publication :
-Holden,M.T.G., "Direct Submission", Submitted (23-JUN-2004) Submitted on behalf of the Pathogen Sequencing Unit, Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, E-mail: mh3@sanger.ac.uk.
-Holden,M.T.G., Feil,E.J., Lindsay,J.A., Peacock,S.J., Day,N.P.J., Enright,M.C., Foster,T.J., Moore,C.E., Hurst,L., Atkin,R., Barron,A., Bason,N., Bentley,S.D., Chillingworth,C., Chillingworth,T., Churcher,C., Clark,L., Corton,C., Cronin,A., Doggett,J., Do, "Complete genomes of two clinical Staphylococcus aureus strains: Evidence for the rapid evolution of virulence and drug resistance", Proc. Natl. Acad. Sci. U.S.A. 101 (26), 9786-9791 (2004) PUBMED 15213324.
-Holden,M.T.G., Feil,E.J., Lindsay,J.A., Peacock,S.J., Day,N.P.J., Enright,M.C., Foster,T.J., Moore,C.E., Hurst,L., Atkin,R., Barron,A., Bason,N., Bentley,S.D., Chillingworth,C., Chillingworth,T., Churcher,C., Clark,L., Corton,C., Cronin,A., Doggett,J., Do, "Direct Submission", Submitted (11-SEP-2004) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Kenny,J.G., Ward,D., Josefsson,E., Jonsson,I.M., Hinds,J., Rees,H.H., Lindsay,J.A., Tarkowski,A. and Horsburgh,M.J., "The Staphylococcus aureus response to unsaturated long chain free fatty acids: survival mechanisms and virulence implications", PLoS ONE 4 (2), E4344 (2009) PUBMED 19183815 REMARK Publication Status: Online-Only.
| DNA sequence : | |
ATGAGTTATGCAGTTTGTAGAATGCAAAAAGTGAAATCAGCTGGACTAAAAGGCATGCAATTTCATAATCAAAGAGAGCG
AAAAAGTAGAACGAATGATGATATTGACCATGAGCGAACACGTGAAAATTATGATTTGAAAAATGATAAAAATATTGATT
ACAACGAACGTGTCAAAGAAATTATTGAATCACAAAAAACAGGTACAAGAAAAACGAGGAAAGATGCTGTTCTTGTAAAT
GAGTTGCTAGTAACATCTGACCGAGATTTTTTTGAGCAACTGGATCCAGGAGAACAAAAACGATTTTTTGAGGAAAGTTA
TAAATTATTTTCCGAACGATATGGCAAGCAAAATATTGCTTATGCAACAGTTCATAATGATGAGCAAACCCCTCACATGC
ATTTAGGTGTTGTGCCTATGCGTGATGGAAAACTGCAAGGAAAAAATGTGTTTAATCGTCAAGAACTGTTATGGCTACAA
GATAAATTCCCCGAGCATATGAAAAAACAGGGTTTTGAGTTGAAGCGTGGTGAACGTGGCTCTGACCGTAAACATATTGA
GACAGCTAAATTTAAAAAACAAACTTTGGAAAAAGAGATTGATTTTCTAGAAAAAAATTTAGCAGTTAAAAAAGATGAAT
GGACTGCTTATAGCGATAAAGTTAAATCAGATTTAGAAGTACCAGCGAAACGACACATGAAAAGTGTTGAAGTGCCAACG
GGTGAAAAGTCTATGTTTGGTTTGGGAAAAGAAATAATGAAAACAGAAAAGAAACCAACCAAAAATGTTGTTATATCGGA
GCGTGATTATAAAAACTTAGTGACTGCTGCGAGAGATAACGATAGGTTAAAACAGCATGTTAGAAATCTCATGAGTACTG
ATATGGCGAGAGAATATAAAAAATTAAGTAAAGAACATGGGCAAGTTAAAGAAAAATATAGTGGTCTTGTAGAGCGATTT
AATGAAAATGTAAATGATTATAATGAGTTGCTTGAAGAAAACAAGTCTTTAAAGTCTAAAATAAGCGATTTAAAGCGTGA
TGTGAGTTTAATCTATGAAAGCACTAAGGAATTCCTTAAGGAACGTACAGACGGCTTAAAAGCCTTTAAAAACGTTTTTA
AGGGGTTTGTAGACAAGGTAAAGGATAAAACAGCACAATTCCAAGAAAAACACGATTTAGAACCTAAAAAGAACGAATTT
GAACTAACTCATAACCGAGAGGTAAAAAAAGAACGAAGTCGAGATCAGGGAATGAGTTTATAA
|
| Protein sequence : | |
MSYAVCRMQKVKSAGLKGMQFHNQRERKSRTNDDIDHERTRENYDLKNDKNIDYNERVKEIIESQKTGTRKTRKDAVLVN
ELLVTSDRDFFEQLDPGEQKRFFEESYKLFSERYGKQNIAYATVHNDEQTPHMHLGVVPMRDGKLQGKNVFNRQELLWLQ
DKFPEHMKKQGFELKRGERGSDRKHIETAKFKKQTLEKEIDFLEKNLAVKKDEWTAYSDKVKSDLEVPAKRHMKSVEVPT
GEKSMFGLGKEIMKTEKKPTKNVVISERDYKNLVTAARDNDRLKQHVRNLMSTDMAREYKKLSKEHGQVKEKYSGLVERF
NENVNDYNELLEENKSLKSKISDLKRDVSLIYESTKEFLKERTDGLKAFKNVFKGFVDKVKDKTAQFQEKHDLEPKKNEF
ELTHNREVKKERSRDQGMSL
|
|
