Name : HMPREF0351_12128 (HMPREF0351_12128)
Accession : YP_006376734.1
PAI name : Not named
PAI accession : NC_017960_P1
Strain : Enterococcus faecium Aus0004
Virulence or Resistance: Not determined
Product : bacteriophage portal protein
Function : -
Note : -
Homologs in the searched genomes : 24 hits ( 24 protein-level )
Publication :
-Muzny,D., Qin,X., Buhay,C., Dugan-Rocha,S., Ding,Y., Chen,G., Hawes,A., Holder,M., Jhangiani,S., Johnson,A., Khan,Z., Li,Z., Liu,W., Liu,X., Perez,L., Shen,H., Wang,Q., Watt,J., Xi,L., Xin,Y., Zhou,J., Deng,J., Jiang,H., Liu,Y., Qu,J., Song,X., Zhang,L., , "Direct Submission", Submitted (18-MAY-2012) Human Genome Sequencing Center, Department of Molecular and Human Gentics, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, USA.
-Qin,X., Galloway-Pena,J.R., Sillanpaa,J., Hyeob Roh,J., Nallapareddy,S.R., Chowdhury,S., Bourgogne,A., Choudhury,T., Munzy,D.M., Buhay,C.J., Ding,Y., Dugan-Rocha,S., Liu,W., Kovar,C., Sodergren,E., Highlander,S., Petrosino,J.F., Worley,K.C., Gibbs,R.A., W, "Complete genome sequence of Enterococcus faecium strain TX16 and comparative genomic analysis of Enterococcus faecium genomes", BMC Microbiol. 12 (1), 135 (2012) PUBMED 22769602 REMARK Publication Status: Online-Only.
-Qin,X., Galloway-Pena,J.R., Sillanpaa,J., Hyeob Roh,J., Nallapareddy,S.R., Chowdhury,S., Bourgogne,A., Choudhury,T., Munzy,D.M., Buhay,C.J., Ding,Y., Dugan-Rocha,S., Liu,W., Kovar,C., Sodergren,E., Highlander,S., Petrosino,J.F., Worley,K.C., Gibbs,R.A., W, "Direct Submission", Submitted (25-MAY-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGGCATTTTTTAAAGCGAGACAAAATACAACGGGAGATCCTTTCCTACAACATGTGGTATCAATCCAATCGGATGATTA
CACCACCAGCTTTACAAGCGTTCGTGCATTAAGAAATAGTGATGTGTTTGCAGCCGTTCGAATTATTGCTAGTGATATTG
CTTCAAGTCCGATTCAATTGGTCAAAAACAATATGCCACAAGCTGATAATGAACTGGTGAAGTTACTAAACGAGAAACCT
AATTCAGAAATGGATGGTTGGCATTTAAAGTTTGCTTTGGCGGTCAATATGTTGCTAAACGGTAATAGCTTTGCAGAGAT
TAAACGCAACGGTGAAAAGGTAGAAGAAATTCACTTATTACCTAACTCAAGTGTAACGGTTACTCAATTAGATAATGGTA
CGTTGTCTTATCAGATTGGTGATAAAAAAAGACGTGTGAAGTCTAGCGATATTTTGCACTTCAAATATTTCACCCAAGAT
GGTTTAACAGGATTACCACCACTTTATGCGTTACGTGATGAACTGAAAATTCAACAAGCTGGCAACCGCACATTGCACAA
TTTCTTTACTCGTGGTGTCAGTGGGTCAGGTATTTTGAAGGTTCATAAGTCAGATTTAGACGGATCAGCAAAGAACGCAA
TTCGTGAAAAGTTTGAAGAAGCCAACGGTTCAAGTAGTGGAGATAATGCTCTTAGAACGATCATTCTTGATGAAACAATG
GACTACAAAACATTAGAAATAAACACCGATGTTTTGAAGCTTATCAATTCCAATGATTGGAACACAAAACAAATTGCCAA
GGCGTTTGGTGTACCGATTGAGCGTTTAGGCGTTGAAAATGAACATTCTAGCACCGTTCAAAGTAATCTCCAGTATATCC
AAAGTACGCTGATTCATTACTTTAATGTGTTTGTGAGTGAATTAGATACGAAACTTGAAACCAATATCCGCTTTAATTCC
GATCAGTTACTAGAGACTGATCCTGAAACAAAAGTAAAAAATGTATTGGATCAGGTCAAAGGGTCACTTCTCACGATTAA
TGAGGGGCGGTCGAAAATGGGGCTACCCCCCATGGATGGTGGCGATCGTTTACTAGCAAGTTTGAACTTTACGTATTTAG
ATACGTTGGAGAAATATCAATTAAAAGAACAGGAAGGAGTTACACCAGTTGAATAA
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| Protein sequence : | |
MAFFKARQNTTGDPFLQHVVSIQSDDYTTSFTSVRALRNSDVFAAVRIIASDIASSPIQLVKNNMPQADNELVKLLNEKP
NSEMDGWHLKFALAVNMLLNGNSFAEIKRNGEKVEEIHLLPNSSVTVTQLDNGTLSYQIGDKKRRVKSSDILHFKYFTQD
GLTGLPPLYALRDELKIQQAGNRTLHNFFTRGVSGSGILKVHKSDLDGSAKNAIREKFEEANGSSSGDNALRTIILDETM
DYKTLEINTDVLKLINSNDWNTKQIAKAFGVPIERLGVENEHSSTVQSNLQYIQSTLIHYFNVFVSELDTKLETNIRFNS
DQLLETDPETKVKNVLDQVKGSLLTINEGRSKMGLPPMDGGDRLLASLNFTYLDTLEKYQLKEQEGVTPVE
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