Name : Spaf_1098 (Spaf_1098)
Accession : YP_006309900.1
PAI name : FWisland_1
PAI accession : NC_017905_P2
Strain : Streptococcus parasanguinis ATCC 15912
Virulence or Resistance: Not determined
Product : relaxase
Function : -
Note : similar to Tn5252 relaxase
Homologs in the searched genomes : 33 hits ( 28 protein-level, 5 DNA-level )
Publication :
-Geng,J., Chiu,C.-H., Tang,P., Chen,Y., Hu,S. and Chen,Y.-Y.M., "Direct Submission", Submitted (16-NOV-2011) Dept. of Microbiology and Immunology and Research Center for Pathogenic Bacteria, Chang Gung University, 259 Wen-Hwa 1st Road, Kwei-Shan, Tao-Yuan 333, Taiwan.
-Geng,J., Chiu,C.H., Tang,P., Chen,Y., Shieh,H.R., Hu,S. and Chen,Y.Y., "Complete Genome and Transcriptomes of Streptococcus parasanguinis FW213: Phylogenic Relations and Potential Virulence Mechanisms", PLoS ONE 7 (4), E34769 (2012) PUBMED 22529932 REMARK Publication Status: Online-Only.
-Geng,J., Chiu,C.H., Tang,P., Chen,Y., Shieh,H.R., Hu,S. and Chen,Y.Y., "Direct Submission", Submitted (09-MAY-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGGTAGTTACTAAACACTTTGCGACGCACGGGAAAAAATATCGTAGGCGTTTAATCAAGTATATTCTCAACCCTGATAA
AACGGACAATTTGAAATTGGTATCTGATTTTGGCATGAGCAATTACTTGGACTTCCCTAGTCATGCAGAAATGGTAGAGA
TGTACAATGTCAACTTCAGCAATAATGACAAGTTGTACGAATCCAGAAACGACCGACAAGAAAAACACCAACAAACTATT
CATGCTCATCACCTCATTCAATCATTTTCTCCTGAAGATAGTCTGACACCTGAAGAAATTAACCGCATTGGTTATGAGAC
CATGATGGAATTGACAGGAGGTCGTTTTAAGTTTATCGTAGCAACTCACACAGACAAAGATCATGTTCATAATCACATCC
TAATCAACGCTATTGACCGCAATTCAGATAAAAAGTTGATATGGAACTATGCCTTGGAACGAAACCTCCGTATGATTTCA
GACCGTATTTCTAAAGTGGCTGGTGCAAAAATTATTGAGAAACGTTATTCCTATCGAGATTATAAAAAATATAGGGAATC
TAGTCATAAGTTTGAATTGAAACAACGTCTTTATTTTTTGCTGCAGCAATCTAAATCGTTTGATGATTTTTTAGAGAAAG
CAAAGCAGTTGCATGTTCAGATTGATTTTAGTCAAAAGCATAGCCGTTTTTTGATGACAGATAGAACGATGATAAAACCA
ATTCGAGGACGCCAACTCAGCAAACGAGATCTATATGATGAAGAATTTTTTAGAACGCATTTTGCTAAGCAAGAGATTGA
AAGTCGTTTAGAATTTTTGTTGAACCGTGTCAATTCTTTAGAAGAGTTAAAAACAAAAGTAAAAGAATTGAATCTAACCA
TTAACTTAAAACAAAAAAATGTAACTTTTATTCTGGAAGAAGATAATCAAAAGATAAGTTTGGGTCATCAAAAAATAAGT
GATAAGAAATTATATGATGTCAAATTTTTTCAAGATTATTTTAAAAATAAGGAAGTCGGTGCTTCAGAAGAATTAGAGAA
TTTACAGGAACAGTACCATGCTTTCCAAAAAGAGCGAGATAAGGATAAAGTATCCACTGAAGAGATTGAGGAAGTCTTTG
AGACATTTAAGGAAAAACGAGATACCGTTCATGAATTTGAAGTGGAACTTGCAGAGAACCAAATAGAGGAGCTAGTTGAT
GAGGGTATTTATATCAAAGTGTCTTTTGGTATTAAGCAGAGTGGTCTCATTTTCATTCCCAATTATCAGCTAGATATTAT
CGAAGAAGACAATCAGAAAAAATATAAAGTCTATATCCGAGAGTCAACCTCATATTTTGTCTATAACAAAGAACATTCGG
ATAAGAATCAGTATATTAAAGGGCGAACCTTGATTAGACAGTTAACCAACGATAATCGAGTAATACCATACAGAAGACCG
ACTGTTGATCGACTTCAAGAAAAGATTTCTGAGATTAACCTCTTGATTGAGTTAACAGAGAGAGACAAAAAATACCAGGA
CATCAAAGACGAACTGGTTGCAGAAATAGCAGAGCTAGACATCAAACTGACTCAAACAAATGAAAAAATCGCCACCTTAA
ACAAGATGGCGGAAGTGCTTATCAATTTGAAGAGTGAAGATGTGAGCAGTCGAAAGCTTGCAAGATATGACTTTTCAAAA
TTAAATTTGCCAGAATCAATTACAGTCGAACAAGTAACCGAAGAAATAAGAGTGTTTCAAGAGGAGCTAGGTCATTATCT
TTATGAGTATGAAAGACTGATTAGAATATTGGAAGAATTTGTAAAAATGTTAAATATTACTACTAATAATCCTAATCCAA
AATTTCAAGAGAATATTTTGATGGACTAA
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| Protein sequence : | |
MVVTKHFATHGKKYRRRLIKYILNPDKTDNLKLVSDFGMSNYLDFPSHAEMVEMYNVNFSNNDKLYESRNDRQEKHQQTI
HAHHLIQSFSPEDSLTPEEINRIGYETMMELTGGRFKFIVATHTDKDHVHNHILINAIDRNSDKKLIWNYALERNLRMIS
DRISKVAGAKIIEKRYSYRDYKKYRESSHKFELKQRLYFLLQQSKSFDDFLEKAKQLHVQIDFSQKHSRFLMTDRTMIKP
IRGRQLSKRDLYDEEFFRTHFAKQEIESRLEFLLNRVNSLEELKTKVKELNLTINLKQKNVTFILEEDNQKISLGHQKIS
DKKLYDVKFFQDYFKNKEVGASEELENLQEQYHAFQKERDKDKVSTEEIEEVFETFKEKRDTVHEFEVELAENQIEELVD
EGIYIKVSFGIKQSGLIFIPNYQLDIIEEDNQKKYKVYIRESTSYFVYNKEHSDKNQYIKGRTLIRQLTNDNRVIPYRRP
TVDRLQEKISEINLLIELTERDKKYQDIKDELVAEIAELDIKLTQTNEKIATLNKMAEVLINLKSEDVSSRKLARYDFSK
LNLPESITVEQVTEEIRVFQEELGHYLYEYERLIRILEEFVKMLNITTNNPNPKFQENILMD
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