Name : SARLGA251_00390 (SARLGA251_00390)
Accession : YP_005754054.1
PAI name : Type-XI SCCmec
PAI accession : NC_017349_R1
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : Similar to Staphylococcus aureus (strain MRSA252) subname: full=putative membrane protein UniProt:Q6GKP0 (EMBL:BX571856) (597 aa) fasta scores: E()=2.3e-137, 56.5% id in 581 aa
Homologs in the searched genomes : 37 hits ( 37 protein-level )
Publication :
-Garcia-Alvarez,L., Holden,M.T., Lindsay,H., Webb,C.R., Brown,D.F., Curran,M.D., Walpole,E., Brooks,K., Pickard,D.J., Teale,C., Parkhill,J., Bentley,S.D., Edwards,G.F., Girvan,E.K., Kearns,A.M., Pichon,B., Hill,R.L., Larsen,A.R., Skov,R.L., Peacock,S.J., M, "Meticillin-resistant Staphylococcus aureus with a novel mecA homologue in human and bovine populations in the UK and Denmark: a descriptive study", Lancet Infect Dis 11 (8), 595-603 (2011) PUBMED 21641281.
-Garcia-Alvarez,L., Holden,M.T., Lindsay,H., Webb,C.R., Brown,D.F., Curran,M.D., Walpole,E., Brooks,K., Pickard,D.J., Teale,C., Parkhill,J., Bentley,S.D., Edwards,G.F., Girvan,E.K., Kearns,A.M., Pichon,B., Hill,R.L., Larsen,A.R., Skov,R.L., Peacock,S.J., M, "Direct Submission", Submitted (05-APR-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Holden,M., "Direct Submission", Submitted (02-FEB-2011) to the INSDC. Holden M., Pathogen Sequencing Unit, The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UNITED KINGDOM.
| DNA sequence : | |
ATGAACCCTTCAAACTTACCTTTCAAACTTGGGAATGCAATTTTGACAATGGTCGGTTGGTTTTTAATTATCCCTGCCAA
GAAAAATGAAGATGAGGATAAACAAGTTTTCATATCAAGCCCTATTGTTATAACAGCAAGATTCATAGATCCAGAGACTA
AAGTTGAAAAAATTATTTTATCAGATTTTAATAATACCGAACTAATTGAAGAGGCTGACATTCTGTCATCACAAAAGCTT
CCAAGCATTATCAAATTTGGATTCAATATAAATGAAAAATATGTCAGAGATTTAGGGTTTATACTTCAACAAATGCGAGC
TAAAACTCCTGTATCACCAATGTATCAAGGTGTTGGTATAATTAACACTGAAAACTACCCTATCATATCGTTGGATGAAC
CTTACGTATCTAAAAAGATACAGCGTTCCTTAAATGAAGAGATCCTATGCGATATACAATACGATCTACAACCTAAAGGT
ACGTTTGAAGGCTGGTGGCAAATGTATCTTGATGAAGTAAAAGGGAATTTGTTACTGGAGCTTGCAGTGATTTTTGGTGT
TTCATCATTAGTCACAGCTTACCTTAAAAACCTACATGAAATTGAGTTTTCCGGTACCATTTATAGTTTCCGAGGTCAGT
CCTCCTCAGGTAAGACTTCGGCTGCTACTCTAGCCGTTTCTATATGTGGTAACCCTAATAAGGGAAGCAAAAGTTTGTTC
CGTTCTTGGAACGGTACACCTAATGCCTTAGAAGCTTATATAAATAATAATTATGGCGTGCCTATCGTCTTAGACGAACT
TTCCACTTCTAGACTGGGTCAATTCACTGAGGTTTTGTATAGTCTATCTGAAGGGCAAGGTCGTCAACGCGCAAATATAC
ATGGAGGTATTAAACCCATCAAACAATCAGGTACGTCAATCATCAGCACATCAGAATTTAGTATATTCAATAAATCTGCA
CGTAATGATGGTTTGAATGTACGTACAATCGAGATATCTGAAGTCTTTACGACTAGCGCTGACAATGCGGATGCCATTAA
AAAAGGCATATCTGCGAATTATGGTCATGTTATGCCCTTAGTCGCTGAGTATCTACTCAATCGTGAACAAGAAGTCATCC
AATGGTTCCGCACTGAGCATCAATGGTTCAAAACGCAACTAGAAAGCGAAACGAGCAATACAGGTATCCGGATGTTCAAG
AGATACGCCACCATTACGACATCTGCCCGTATATTGGAACGCGTAATTGCAACCCCTATCGATTTGAACGCAGTTAGAGA
TTATCTCATTAATTATCACGTTGATTCTGTAAGTGAAAGGTCCCTGGGGGATAAGGCTATCGATGTAATTGTGCAGTTCG
TCATGAGAAATCGTGGGAAATTTGCAGAAAATGGAAAACTCTCAACAATGATTGAAAATTATGGCCTTATTGAGCTGAAA
GACGATCACATTCAAGTCAAAATTCTTAAAGATGTTTTTAAACATATGTTGGACGAAAATCAATTCCAAGACGAGTCCAA
TGTCCTAGATAGTTTGCGTGACCAGGGTTATATGGAGTCTGACCGCAACCGTAAAACGACCAAGCGAAGCGTTAAAGATG
CAAAAGGTCAATCAAAAACACTGGTATTTTATCATCTCAAGATACACAAATCTTACGCCCCTATTTTCGGCTTAAGCTCT
AATACTGAAACTTTTACAACACCGCAATTTGATGGTAATACAAATCCAGATTTGCTTAATGAATTTGTTAAGCAAGCTAA
AGAAAAAGAAGCAAGTGACGATTTAGAAATATAA
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| Protein sequence : | |
MNPSNLPFKLGNAILTMVGWFLIIPAKKNEDEDKQVFISSPIVITARFIDPETKVEKIILSDFNNTELIEEADILSSQKL
PSIIKFGFNINEKYVRDLGFILQQMRAKTPVSPMYQGVGIINTENYPIISLDEPYVSKKIQRSLNEEILCDIQYDLQPKG
TFEGWWQMYLDEVKGNLLLELAVIFGVSSLVTAYLKNLHEIEFSGTIYSFRGQSSSGKTSAATLAVSICGNPNKGSKSLF
RSWNGTPNALEAYINNNYGVPIVLDELSTSRLGQFTEVLYSLSEGQGRQRANIHGGIKPIKQSGTSIISTSEFSIFNKSA
RNDGLNVRTIEISEVFTTSADNADAIKKGISANYGHVMPLVAEYLLNREQEVIQWFRTEHQWFKTQLESETSNTGIRMFK
RYATITTSARILERVIATPIDLNAVRDYLINYHVDSVSERSLGDKAIDVIVQFVMRNRGKFAENGKLSTMIENYGLIELK
DDHIQVKILKDVFKHMLDENQFQDESNVLDSLRDQGYMESDRNRKTTKRSVKDAKGQSKTLVFYHLKIHKSYAPIFGLSS
NTETFTTPQFDGNTNPDLLNEFVKQAKEKEASDDLEI
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