Name : SAOV_1927c (SAOV_1927c)
Accession : YP_005737371.1
PAI name : phi_Sa3
PAI accession : NC_017337_P4
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : Phage capsid protein
Function : -
Note : -
Homologs in the searched genomes : 8 hits ( 8 protein-level )
Publication :
-Guinane,C.M., Ben Zakour,N.L., Tormo-Mas,M.A., Weinert,L.A., Lowder,B.V., Cartwright,R.A., Smyth,D.S., Smyth,C.J., Lindsay,J., Gould,K.A., Witney,A., Hinds,J., Bollback,J.P., Rambaut,A., Penades,J. and Fitzgerald,J.R., "Direct Submission", Submitted (29-MAR-2010) The Roslin Institute and Centre for Infectious Diseases, Royal (Dick) School of Veterinary Studies, University of Edinburgh, The Chancellor's Building, New Royal Infirmary, 49 Little France Crescent, Edinburgh EH16 4SB, United King.
-Guinane,C.M., Ben Zakour,N.L., Tormo-Mas,M.A., Weinert,L.A., Lowder,B.V., Cartwright,R.A., Smyth,D.S., Smyth,C.J., Lindsay,J.A., Gould,K.A., Witney,A., Hinds,J., Bollback,J.P., Rambaut,A., Penades,J.R. and Fitzgerald,J.R., "Evolutionary genomics of Staphylococcus aureus reveals insights into the origin and molecular basis of ruminant host adaptation", Genome Biol Evol 2, 454-466 (2010) PUBMED 20624747 REMARK Publication Status: Online-Only.
-Guinane,C.M., Ben Zakour,N.L., Tormo-Mas,M.A., Weinert,L.A., Lowder,B.V., Cartwright,R.A., Smyth,D.S., Smyth,C.J., Lindsay,J.A., Gould,K.A., Witney,A., Hinds,J., Bollback,J.P., Rambaut,A., Penades,J.R. and Fitzgerald,J.R., "Direct Submission", Submitted (05-APR-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGAAAACAAAAGAAGAGTTACAATCTGAGATTTCAGACATTAAAAGACAAATTGATTTAAAGGTGAAGTATGCAACGCG
AGCACTTAATAACGATGAGTTAGAAAAAGCAGAAAAATTAGAACAAGAAATTACTGATTTACGTTCTCAAATCCAAGAAA
AACAAGAAGAATTAGATAAGCTAAAAGAAAAAGATGGAACTTCAGAAAAAAATCCACAATCAGTTGAAGTAAACGAAGCA
CGTACTTATCGAAACCAAGCAAACATTAATGATTTAGGTATTTCGATTCAAAACACAAAAGTAACATCACAAGAAGTTAG
AGATTTTACTGAATATCTTGAAACACGCAATGATATTCAAGGTGGTTCGTTAAAAACAGACTCAGGATTTGTAGTTATTC
CAGAGGAAATTGTTACAGATATTTTAAAATTAAAAGAGGTTGAGTTTAATCTTGATAAGTATGTGACGGTCAAACGTGTT
ACAAATGGTTCTGGTAAATATCCGGTAGTACGACAATCAGAAGTTGCAGCACTTGAAAAAGTTGAAGAATTAGAAGAAAA
CCCTGAATTAGCAGTTAAACCATTCTTCCAATTAGCATATGACATTAATACACACCGTGGTTACTTCCGAATTTCACGTG
AAGCAATCGAAGATGCAAAAGTTAACGTTTTGCAAGAATTGAAACTATGGATGGCACGAACTATTGCGGCAACACGAAAC
AAAGCAATTATTGATGTTATCACTAAAGGATCAACAGGTTCTACAAGTTCAGGTTTTGAAAAAGAAGGCAAGAAATTAGA
TGTTAAAAAAGCAAAATCTTTAGATGATATTAAAGATGCTATTAACCTGAATGTTAAGCTGAATTACGAACATAATGTTG
CGATTGTTTCGCAAACTATGTTTGCAAAATTAGACAAAATGAAAGATAAGCTAGGAAACTATTTAATCCAGCCAGATGTT
AAAGAAAAAACGCAACAGCGTTTATTAGGAGCTAAAATCGAAATTTTACCTGATGAAGTACTAGGGCAAAAAGGTAATAA
CACTTTGATTATCGGTAACTTAAAAGATGCGATTGTTTTATTTGACCGCTCTCAATACCAAGCATCATGGACTGACTACA
TGCATTTCGGAGAATGTTTAATGATTGCTGTACGTCAAGACTGTAGAATTTTAGATTATAAATCAGCAATTGTGATTGAA
TATGATGATAGTGAACGCGGTGAAGGCGATCTTGGCTTAGAAGCATAA
|
| Protein sequence : | |
MKTKEELQSEISDIKRQIDLKVKYATRALNNDELEKAEKLEQEITDLRSQIQEKQEELDKLKEKDGTSEKNPQSVEVNEA
RTYRNQANINDLGISIQNTKVTSQEVRDFTEYLETRNDIQGGSLKTDSGFVVIPEEIVTDILKLKEVEFNLDKYVTVKRV
TNGSGKYPVVRQSEVAALEKVEELEENPELAVKPFFQLAYDINTHRGYFRISREAIEDAKVNVLQELKLWMARTIAATRN
KAIIDVITKGSTGSTSSGFEKEGKKLDVKKAKSLDDIKDAINLNVKLNYEHNVAIVSQTMFAKLDKMKDKLGNYLIQPDV
KEKTQQRLLGAKIEILPDEVLGQKGNNTLIIGNLKDAIVLFDRSQYQASWTDYMHFGECLMIAVRQDCRILDYKSAIVIE
YDDSERGEGDLGLEA
|
|
