Name : SAOV_0342 (SAOV_0342)
Accession : YP_005735859.1
PAI name : phi_Sa1
PAI accession : NC_017337_P1
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : prophage amidase, putative
Function : -
Note : -
Homologs in the searched genomes : 30 hits ( 29 protein-level, 1 DNA-level )
Publication :
-Guinane,C.M., Ben Zakour,N.L., Tormo-Mas,M.A., Weinert,L.A., Lowder,B.V., Cartwright,R.A., Smyth,D.S., Smyth,C.J., Lindsay,J., Gould,K.A., Witney,A., Hinds,J., Bollback,J.P., Rambaut,A., Penades,J. and Fitzgerald,J.R., "Direct Submission", Submitted (29-MAR-2010) The Roslin Institute and Centre for Infectious Diseases, Royal (Dick) School of Veterinary Studies, University of Edinburgh, The Chancellor's Building, New Royal Infirmary, 49 Little France Crescent, Edinburgh EH16 4SB, United King.
-Guinane,C.M., Ben Zakour,N.L., Tormo-Mas,M.A., Weinert,L.A., Lowder,B.V., Cartwright,R.A., Smyth,D.S., Smyth,C.J., Lindsay,J.A., Gould,K.A., Witney,A., Hinds,J., Bollback,J.P., Rambaut,A., Penades,J.R. and Fitzgerald,J.R., "Evolutionary genomics of Staphylococcus aureus reveals insights into the origin and molecular basis of ruminant host adaptation", Genome Biol Evol 2, 454-466 (2010) PUBMED 20624747 REMARK Publication Status: Online-Only.
-Guinane,C.M., Ben Zakour,N.L., Tormo-Mas,M.A., Weinert,L.A., Lowder,B.V., Cartwright,R.A., Smyth,D.S., Smyth,C.J., Lindsay,J.A., Gould,K.A., Witney,A., Hinds,J., Bollback,J.P., Rambaut,A., Penades,J.R. and Fitzgerald,J.R., "Direct Submission", Submitted (05-APR-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGTTAATGACAAGAAATCAAGCAGAAAAATGGTTTGATAACTCATTAGGAAAACAATTTAATCCAGATGGTTGGTACGG
GTTTCAATGTTACGATTATGCAAATATGTTCTTTATGTTAGCAACAGGAGAAAGGTTACAAGGTTTATACGCTTATAATA
TCCCATTTGATAATAAAGCGAAAATTGAAAAATATGGTCAAATAATTAAAAACTATGACAGTTTTTTACCACAAAAGTTG
GACATTGTCGTCTTCCCATCGAAGTATGGTGGTGGAGCGGGTCATGTTGAAATTGTTGAGAGTGCAAATTTAAACACTTT
CACATCATTTGGCCAAAACTGGAATGGGAAAGGATGGACTAATGGCGTTGCGCAACCTGGCTGGGGTCCTGAAACTGTTA
CAAGACATGTCCATTATTATGACAATCCAATGTATTTTATTAGATTAAATTTCCCTGATAGCATAAGTGTTAAGGATAAG
GCTAAAGGTATTATTAAGCAAGCAACTGCAAAAAAAGAGGCAGTAATTAAACCTAAAAGGATTATGCTTGTGGCTGGTCA
TGGATATAATGATCCAGGCGCAGTTGGTAATGGAACAAACGAACGTGATTTCATCCGTAAATATATAACGCCCAATATCG
CTAAGTATCTAAGACATGCGGGACATGAAGTTGCTTTATATGGCGGCTCCAGTCAATCACAAGACATGTATCAAGATACT
GCATACGGTGTTAATGTAGGGAATAAAAAAGACTATGGCTTATATTGGGTTAAATCACAGGGGTATGACATTGTTTTAGA
GATACATTTAGATGCAGCAGGAGAAAGCGCAAGTGGCGGTCATGTTATTATCTCAAGTCAATTCAATGCAGATACTATTG
ATAAAAGTATACAAGATGTTATTAAAAATAACTTGGGACAAATAAGAGGTATAACACCTCGTAATGATTTGCTAAATGTT
AATGTATCAGCTGAAATAAATATTAATTACCGCTTATCTGAATTAGGTTTTATTACTAATAAAAATGATATGGATTGGAT
TAAGAAAAATTACGACTTGTACTCTAAACTAATAGCTGGTGCGATTCATGGTAAGTCTATAGGTGGTTTGGTAGCTAGTG
AGGTTAAAGTGCCAGTTAAAAACGAAAAGAATCCACCAGTACCAGCAGGTTATACCTTAGATAGTAAAGGGGTACCATAT
AAAAAAGAACAAGGCAATTACACAGTAGCTAATGTTAAAGGTAATAATGTAAGAGACGGTTATTCAACTAATTCAAGAAT
CACTGGGGTATTACCTAACAACACAACAATCACGTATGACGGCGCCTATTGTATCAATGGTTACAGATGGATCACTTATA
TTGCTAATAGTGGACAACGTCGTTATATTGCGACAGGAGAGGTAGACAAGGCAGGTAATCGAATAAGTAGTTTCGGTAAG
TTTAGTGCAATATAA
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| Protein sequence : | |
MLMTRNQAEKWFDNSLGKQFNPDGWYGFQCYDYANMFFMLATGERLQGLYAYNIPFDNKAKIEKYGQIIKNYDSFLPQKL
DIVVFPSKYGGGAGHVEIVESANLNTFTSFGQNWNGKGWTNGVAQPGWGPETVTRHVHYYDNPMYFIRLNFPDSISVKDK
AKGIIKQATAKKEAVIKPKRIMLVAGHGYNDPGAVGNGTNERDFIRKYITPNIAKYLRHAGHEVALYGGSSQSQDMYQDT
AYGVNVGNKKDYGLYWVKSQGYDIVLEIHLDAAGESASGGHVIISSQFNADTIDKSIQDVIKNNLGQIRGITPRNDLLNV
NVSAEININYRLSELGFITNKNDMDWIKKNYDLYSKLIAGAIHGKSIGGLVASEVKVPVKNEKNPPVPAGYTLDSKGVPY
KKEQGNYTVANVKGNNVRDGYSTNSRITGVLPNNTTITYDGAYCINGYRWITYIANSGQRRYIATGEVDKAGNRISSFGK
FSAI
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