Name : SAPIG0038 (SAPIG0038)
Accession : YP_005732848.1
PAI name : Type-V SCCmec
PAI accession : NC_017333_R1
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : transposase
Function : -
Note : -
Homologs in the searched genomes : 593 hits ( 587 protein-level, 6 DNA-level )
Publication :
-Schijffelen,M.J., "Direct Submission", Submitted (23-APR-2008) Schijffelen M.J., Medical Microbiologie, UMC Utrecht, Heidelberglaan 100, Utrecht, 3584 CX, NETHERLANDS.
-Schijffelen,M.J., Boel,C.H., van Strijp,J.A. and Fluit,A.C., "Whole genome analysis of a livestock-associated methicillin-resistant Staphylococcus aureus ST398 isolate from a case of human endocarditis", BMC Genomics 11, 376 (2010) PUBMED 20546576 REMARK Publication Status: Online-Only.
-Schijffelen,M.J., Boel,C.H., van Strijp,J.A. and Fluit,A.C., "Direct Submission", Submitted (19-OCT-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTACTATCTAAGATATACATTGAG
TTATCGTGATATATCTGAAATATTAAGGGAACGTGGTGTAAACGTTCATCATTCAACGGTCTACCGTTGGGTTCAAGAAT
ATGCCCCAATTTTGTATCAAATTTGGAAGAAAAAGCATAAAAAAGCTTATTACAAATGGCGTATTGATGAGACGTACATC
AAAATAAAAGGAAAATGGAGCTATTTATATCGTGCCATTGATGCAGAGGGACATACATTAGATATTTGGTTGCGTAAGCA
ACGAGATAATCATTCAGCATATGCGTTTATCAAACGTCTCATTAAACAATTTGGTAAACCTCAAAAGGTAATTACAGATC
AGGCACCTTCAACGAAGGTAGCAATGGCTAAAGTAATTAAAGCTTTTAAACTTAAACCTGACTGTCATTGTACATCGAAA
TATCTGAATAACCTCATTGAGCAAGATCACCGTCATATTAAAGTAAGAAAGACAAGGTATCAAAGTATCAATACAGCAAA
GAATACTTTAAAAGGTATTGAATGTATTTACGCTCTATATAAAAAGAACCGCAGGTCTCTTCAGATCTGCGGATTTTCGC
CATGCCATGAAATTAGCATCATGCTAGCAAGTTAA
|
| Protein sequence : | |
MNYFRYKQFNKDVITVAVGYYLRYTLSYRDISEILRERGVNVHHSTVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYI
KIKGKWSYLYRAIDAEGHTLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSK
YLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQICGFSPCHEISIMLAS
|
|
