PAI Gene Information


Name : SAMSHR1132_03890 (SAMSHR1132_03890)
Accession : YP_005324910.1
PAI name : vSa_alpha
PAI accession : NC_016941_P1
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Not determined
Product : putative lipoprotein
Function : -
Note : -
Homologs in the searched genomes :   671 hits    ( 668 protein-level,   3 DNA-level )  
Publication :
    -Holt,D.C., Holden,M.T., Tong,S.Y., Castillo-Ramirez,S., Clarke,L., Quail,M.A., Currie,B.J., Parkhill,J., Bentley,S.D., Feil,E.J. and Giffard,P.M., "A very early-branching Staphylococcus aureus lineage lacking the carotenoid pigment staphyloxanthin", Genome Biol Evol 3, 881-895 (2011) PUBMED 21813488.

    -Holt,D.C., Holden,M.T., Tong,S.Y., Castillo-Ramirez,S., Clarke,L., Quail,M.A., Currie,B.J., Parkhill,J., Bentley,S.D., Feil,E.J. and Giffard,P.M., "Direct Submission", Submitted (27-FEB-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.


DNA sequence :
ATGAGATTTTTAAAGAGAGTCGCATTGTACATAAGTATTATGGCTTTGAGCATTTTTATAATAGGGTGTAATAGTTCAAG
CGATACCGCAAAAAAACCAAAAGAAGACTCAAAAGAAGACCAAATCAAAAAGAGCTTTGCGAAAACGTTAGATATGTACC
CTATTAAGAATCTCGAGGATTTATATGATAAAGAAGGATATCGAGATGGCGAATTTAAAAAGGGCGATAAAGGTATGTGG
ACGATATACACAGATTTCGCCAAAAATAATAGATCAGGTGTATTAGATAATGAAGGTATGGTTTTAAATTTGGATAGAAA
TACACGGACGGCCAAGGGATATTATTTTGTAGATACTATATATGACAATCATGAAAATTCTTATAGTAAAAATTATAAAG
TTGAAATGAAAAACAATAAAATTATTTTATTAGACAAGGTGGAAGATCAAAAACTTAAAGAAAGAATTGAAAACTTTAAA
TTTTTCGGACAATATGCCGATTTCAAGAGTTTGAAAAGTTACAACAATGGTGATGTCTCAATTAATGAGAATGTTCCAAG
CTATGACGTGAAATATAAAATGAGTAATAAAGATGAAAATGTTAAGCAATTAAGAAGTCGTTATAATATTCCTACTGATA
AAGCACCGGTATTAAAAATGCATATTGATGGTAATTTGAAAGGAAGTTCTGTTGGATATAGAAAGTTAGAAATTGATTTT
TCAAAACGCGAAAATAGCCATTTATCAGTAATAGATTCTTTGGATTACCAGCCAGCGAAAACTAATAAAGATGATGAATG
A

Protein sequence :
MRFLKRVALYISIMALSIFIIGCNSSSDTAKKPKEDSKEDQIKKSFAKTLDMYPIKNLEDLYDKEGYRDGEFKKGDKGMW
TIYTDFAKNNRSGVLDNEGMVLNLDRNTRTAKGYYFVDTIYDNHENSYSKNYKVEMKNNKIILLDKVEDQKLKERIENFK
FFGQYADFKSLKSYNNGDVSINENVPSYDVKYKMSNKDENVKQLRSRYNIPTDKAPVLKMHIDGNLKGSSVGYRKLEIDF
SKRENSHLSVIDSLDYQPAKTNKDDE