Name : topB1 (Pmu_03290)
Accession : YP_005176228.1
PAI name : ICEPmu1
PAI accession : NC_016808_R1
Strain : Pasteurella multocida 36950
Virulence or Resistance: Not determined
Product : DNA topoisomerase III
Function : -
Note : -
Homologs in the searched genomes : 350 hits ( 350 protein-level )
Publication :
-Brenner-Michael,G., Kadlec,K., Sweeney,M.T., Brzuszkiewicz,E., Liesegang,H., Daniel,R., Watts,J.L. and Schwarz,S., "Direct Submission", Submitted (19-AUG-2011) Institute of Farm Animal Genetics (FLI), Neustadt-Mariensee, Lower-Saxony 31535, Germany.
-Michael,G.B., Kadlec,K., Sweeney,M.T., Brzuszkiewicz,E., Liesegang,H., Daniel,R., Murray,R.W., Watts,J.L. and Schwarz,S., "ICEPmu1, an integrative conjugative element (ICE) of Pasteurella multocida: structure and transfer", J. Antimicrob. Chemother. (2011) In press PUBMED 22001176 REMARK Publication Status: Available-Online prior to print.
-Michael,G.B., Kadlec,K., Sweeney,M.T., Brzuszkiewicz,E., Liesegang,H., Daniel,R., Murray,R.W., Watts,J.L. and Schwarz,S., "Direct Submission", Submitted (06-FEB-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGAAATTATTTATTTGTGAAAAGCCATCTCAAGCTCGAGATCTTGCCGGCGTATTGGGTGCTACTTCAAAAGGTGAAGG
CTTGCTGGCGACTGCGGATAAATCTATTATTGTCACTTGGGGGTTCGGGCATCTCGTTGAGCAATATCAGCCGGAAGATT
ATGATGAAGCGTGGAAACGCTGGGCATTTGAAACATTACCCATTATTCCTGCTCAGTGGAAAATGACACCGAAAAAAGAG
TCTAAGAAGCAATATTCTGTTGTAATAGGGCTTATCAAAAAAGCAACCTCCGTGGTCATTGCGACCGATGCTGATCGAGA
AGGTGAGATGATTGCTCGTGAGCTGTTAGATTTAGCTGGATACCGAGGTCAAATCCAACGTTGCTGGCTATCAGCTCTGG
ATGATGCCAGTATTCGAAAGGCTCTTCAAACACTCAAATCAGGTAAAGAAACCGAGGCTCTTTACTACGCCGGTATGGGA
CGTAGCCGCTCGGACTGGTTGATTGGAATGAACTTCTCCCGTTTATTTACCTTAATGGCTCAAGCAAAAGGCTATTCCGG
TAAGCCATTGAGCGTTGGTCGAGTACAAAGTCCAACATTAACTCTTGTGGTTAATCGAGATAGAGAAATTGCTAATTTCG
TGCCTAAATCTCATTATGCGTTAGCGGTTCAGCTGACAACAACCTCTGGTGAAACTTTCGTTGCCGGGCTTGCAGTACCT
GAACAGTATTTGGATGAGTCCGGACTTTGCCTTGATAGTCGTGTCATACAACAAGCCGAAGCTCAAATTAAACAAACAGG
CTTAGCCAAAGTGGTGACGGTTGAAACTAAACGAGAGAAAAAATCTCCACCGTTACTCTACGCATTAAGTGATTTACAAG
GCGAATGTAACCGCTTGTTTGGCTTTGGGGCTCAGCAGGTGTTGGATATCGCACAATCCCTTTACGAAGAGCATAAAATC
ACGACTTATCCCCGTACAGACTGTGGTTATCTGCCAGAATCACAATTTTCTGATGTTCCTAACGTAATCCGCTCATTAGT
TGCCTCTGATTCAGGGCTACAAACTCTCTTGCCTAAATTAAATTTGCGACAAAAAAGTCGGGCGTGGGACGATAAAAAAA
TTACCGCTCACCACGGTATTATCCCAACCATTAAAAAAGCTGATTTAAGTAAATTGAGTGAGGAGGAAATGAAGGTCTAT
GATCTCATTCGCCGCCGATATCTTGCTCAATTCTTACCGCACTTGGAAATGGATAAAACCGTTGCCACTCTGCAATCTAG
TGGGCACACTCTGGTTGCTCGGGGAAATGTCATCGTTGCTCAAGGCTGGCGTATCTTGTTTGGCAAAAATGTGGATGAGG
AAACTGGTAATGATGATGAGAAACAAGGATTACCTGTATTGACTAAAAATCAGCAATGCAATGTCACTCATTCTGAAGTC
CGAACATTGCAAACTAAACCTCCCGCACACTATACAGAGGGGACATTACTCGATGCAATGAAAAATGCCGCTCGCTTTGT
GACTGACCCAAGACTCAAACAACGCTTACGTGAAACGGAAGGTTTAGGCACAGAAGCAACCCGTGCCGGATTAATTCAAG
GCCTAATTGACAAAGGATTTCTCCTTAAGAAGAAAAAATCACTGGTTGCCTCAGCAGAAGCCGTTGCCTTAATTGATAGT
TTGCCGGACTTACTGAAAAATCCCGGTTTAACGGCATTATGGGAACAAGCCCTCAATCAGATTGCCGAAGGTAGTATGAC
ACTTGATGCATTTATGCAAAAGCAAGAAGCATTTGTAAAACAACTTATCGGCAGTTGTATGCAACAGGGAATGTCACTTG
GGAATATTGAAATCCGAAAATGTTCAGAATGTGGTAAGCCAATGAGAAAAATCAATCACGCTAAGGGAACATTCTGGGGA
TGTACTGGTTATCCAGATTGCCAACATAAAGAGGCTGATAAAAAGGTAAAATCAGCTTCAAATAAATCTGCTAAGAAAAG
TAGTAATTTAAATGTACTCGATCAACTGAATAAATTAAGAAGCCAGTTATAA
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| Protein sequence : | |
MKLFICEKPSQARDLAGVLGATSKGEGLLATADKSIIVTWGFGHLVEQYQPEDYDEAWKRWAFETLPIIPAQWKMTPKKE
SKKQYSVVIGLIKKATSVVIATDADREGEMIARELLDLAGYRGQIQRCWLSALDDASIRKALQTLKSGKETEALYYAGMG
RSRSDWLIGMNFSRLFTLMAQAKGYSGKPLSVGRVQSPTLTLVVNRDREIANFVPKSHYALAVQLTTTSGETFVAGLAVP
EQYLDESGLCLDSRVIQQAEAQIKQTGLAKVVTVETKREKKSPPLLYALSDLQGECNRLFGFGAQQVLDIAQSLYEEHKI
TTYPRTDCGYLPESQFSDVPNVIRSLVASDSGLQTLLPKLNLRQKSRAWDDKKITAHHGIIPTIKKADLSKLSEEEMKVY
DLIRRRYLAQFLPHLEMDKTVATLQSSGHTLVARGNVIVAQGWRILFGKNVDEETGNDDEKQGLPVLTKNQQCNVTHSEV
RTLQTKPPAHYTEGTLLDAMKNAARFVTDPRLKQRLRETEGLGTEATRAGLIQGLIDKGFLLKKKKSLVASAEAVALIDS
LPDLLKNPGLTALWEQALNQIAEGSMTLDAFMQKQEAFVKQLIGSCMQQGMSLGNIEIRKCSECGKPMRKINHAKGTFWG
CTGYPDCQHKEADKKVKSASNKSAKKSSNLNVLDQLNKLRSQL
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