Name : Pmu_03190 (Pmu_03190)
Accession : YP_005176218.1
PAI name : ICEPmu1
PAI accession : NC_016808_R1
Strain : Pasteurella multocida 36950
Virulence or Resistance: Not determined
Product : conjugal transfer protein TraD
Function : -
Note : -
Homologs in the searched genomes : 138 hits ( 138 protein-level )
Publication :
-Brenner-Michael,G., Kadlec,K., Sweeney,M.T., Brzuszkiewicz,E., Liesegang,H., Daniel,R., Watts,J.L. and Schwarz,S., "Direct Submission", Submitted (19-AUG-2011) Institute of Farm Animal Genetics (FLI), Neustadt-Mariensee, Lower-Saxony 31535, Germany.
-Michael,G.B., Kadlec,K., Sweeney,M.T., Brzuszkiewicz,E., Liesegang,H., Daniel,R., Murray,R.W., Watts,J.L. and Schwarz,S., "ICEPmu1, an integrative conjugative element (ICE) of Pasteurella multocida: structure and transfer", J. Antimicrob. Chemother. (2011) In press PUBMED 22001176 REMARK Publication Status: Available-Online prior to print.
-Michael,G.B., Kadlec,K., Sweeney,M.T., Brzuszkiewicz,E., Liesegang,H., Daniel,R., Murray,R.W., Watts,J.L. and Schwarz,S., "Direct Submission", Submitted (06-FEB-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGTCTGCTAAACATACCTTAGAGGCGTGGTTACGACCTCCTGTTGAATTTTTTCCGGCAGCGGTTCACGCTTCTTGTGC
CTTTGTCAGTGCTGCAGCTCCTTGGTCTTTGGCACTCCATCCAAGTATCGGTTACAGTATTGCAGCTGGTTTTGGAGCAT
TGAGCTTTTATCGGGCAAAACAAGGTTGGCAAATTGTGCGTTACCATCGCAACCTGAAACGTTTGCCTAATTATTCAATG
ACAAGCAAGCAAATTCCGGTCAGTAATAAGTATCTGTTTGTCGGTAAGGGATTTGAATGGAAACCTATTCACACTCAACG
GTTACACGATTGTTTTTCGGATAACGGTTCAAAATATCTGGAGCCTTCTAAGCTATTTAAAATGGCTCGTGAGTATGAAA
AACGACACGAAAATTGGCTAACACATCTTACCTCAAAGGATAGCCGGTGGAATCTGGTTAGACCTCTGCCACCTGTTGAG
GGTATTCCTGCTATCCATGGAATTGAGCCGGATGAGGTTGATGTCGTTCAATCCGTTAGCTCTCGGGTTGGGCATACGGT
AGTATTCGGTACAACACGTGTCGGTAAAACTCGTTTAGCTGAGGTCTTTGTTACCCAGGATATCCACCGAGGTAAAACTG
CTGATGAGCGTGAAGTGGTAGTCTTCTTTGATCCGAAAGGCGATGCCGATATGCTCAAACGAATGTATGCGGAGGCAAAA
CGAGCGGGGCGAGAAGATGAGTTTTATGTTTTCCATCTAGGTTATCCCGAAATTTCTGCCCGTTATAACCCAGTAGGACG
CTTTAATCGTATTTCGGAAGTCGCTGGGCGTATTTCAGGACAGCTAAGTGGAGCGGGTAACTCGGCGGCATTTAAAGAGT
TCGCTTGGCGATTTGTCAATATCGTCGCACGTGCATTAGTTGAATTGGGAAATCGCCCAAACTATGTTCAAATTTCCCAG
TTTGTACAAAATATTGATTCATTATTCCTTGATTATGCGGAAAAATTCATTCGTAAAACCGATCCAAAAATTTGGGAAAA
TTTAGCAACCATCGCCGCTGGACTGGATGAAAAAGCACTTCCTTTCGGAATGAAAGACCGTCCGCTGATTTTTGTGATCA
ACAAGTACATTGCTGAAAGTGCAGTCTTTGACCCAATTCTACAAGGACTTGCCAGTGCTGTACGCTATGACCGTACCTAT
TTCGATAAAATTGTTGCCTCATTGTTGCCGTTATTGGAAAAATTAACGACAGGGAAAATTTCTGAGCTGTTATCCCCGGA
TTATGCTGATATTTTGGATGAACGTCCGATTTTTGACTGGGAATCCATTATTCGTAAACGAGGAATCGTTTATATTGGTT
TAGATGCTCTCTCTGATGCGACAGTTGCGGCCGCTGTAGGAAACAGTATGTTTGCTGACTTAGTCTCAATGGCAGGTCAT
TTATATAAATTTGGGACAAATGACGGATTACCGGGAGCATTCAAAGAAAAATCCAAACCAGTGAAAATTAATCTTCATTG
TGATGAATTTAATGAATTGATGGGTGATGAATTTATCCCTCTCATCAACAAAGGCGGTGGTGCTGGAATACAAGTAACTG
CTTATACACAAACACTCTCCGACATTGAAGCTCGTATCGGCAGTAAACCGAAAGCGGGACAAACCTTAGGTAACTTCAAT
ACACTCTATATGCTGAGGGTAAAAGAACCGGCTACGGCAGAATTACTCACAAAACAGTTACACGAAGTGACGATTAAACG
TAGCACGGTCACGTCCAGTACAACTGACTCCAGTAATCCTGACGATGATAAGGCGTTTAGCTCCAATACCGGACAGCGTA
TCAGCGAAAGTACCGTTCCTATGTTGGTTCCGGCCAACATTACCAATTTACCAAAAGGACAAGCATTCGCTTTAATGGAC
GGTAGTAAATTATGGAAAATTCGAATGCCGTTACCTGCTGTCGATAAAGATGATATGATGCATCAATCTTTACGAGAGCT
GACAGATTATATGCGTAAAAACTATCACGTTGTTGAAAATTGGTGGCAACCGGCATTTACAGAATATACGCCGTCCCGAG
ACATTGCAGAAGCATTTGAAGCGATGTCGGAGCCTCAATATAAAACACAGATAGACCATCAAGTAGATAATTTCGGCATA
GATGAACCTTACGATATTGATGAAGAGGAAAATGATGAGTAG
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| Protein sequence : | |
MSAKHTLEAWLRPPVEFFPAAVHASCAFVSAAAPWSLALHPSIGYSIAAGFGALSFYRAKQGWQIVRYHRNLKRLPNYSM
TSKQIPVSNKYLFVGKGFEWKPIHTQRLHDCFSDNGSKYLEPSKLFKMAREYEKRHENWLTHLTSKDSRWNLVRPLPPVE
GIPAIHGIEPDEVDVVQSVSSRVGHTVVFGTTRVGKTRLAEVFVTQDIHRGKTADEREVVVFFDPKGDADMLKRMYAEAK
RAGREDEFYVFHLGYPEISARYNPVGRFNRISEVAGRISGQLSGAGNSAAFKEFAWRFVNIVARALVELGNRPNYVQISQ
FVQNIDSLFLDYAEKFIRKTDPKIWENLATIAAGLDEKALPFGMKDRPLIFVINKYIAESAVFDPILQGLASAVRYDRTY
FDKIVASLLPLLEKLTTGKISELLSPDYADILDERPIFDWESIIRKRGIVYIGLDALSDATVAAAVGNSMFADLVSMAGH
LYKFGTNDGLPGAFKEKSKPVKINLHCDEFNELMGDEFIPLINKGGGAGIQVTAYTQTLSDIEARIGSKPKAGQTLGNFN
TLYMLRVKEPATAELLTKQLHEVTIKRSTVTSSTTDSSNPDDDKAFSSNTGQRISESTVPMLVPANITNLPKGQAFALMD
GSKLWKIRMPLPAVDKDDMMHQSLRELTDYMRKNYHVVENWWQPAFTEYTPSRDIAEAFEAMSEPQYKTQIDHQVDNFGI
DEPYDIDEEENDE
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