Name : spaH (CDB402_0199)
Accession : YP_005126712.1
PAI name : Not named
PAI accession : NC_016783_P1
Strain : Corynebacterium diphtheriae 241
Virulence or Resistance: Not determined
Product : putative surface-anchored fimbrial subunit
Function : -
Note : Predicted outer membrane protein
Homologs in the searched genomes : 4 hits ( 4 protein-level )
Publication :
-Trost,E., Blom,J., Al-Dilaimi,A., Schroeder,J., Soares,S.C., Dorella,F.A., Rocha,F.S., Miyoshi,A., Azevedo,V., Schneider,M.P., Silva,A., Camello,T.C., Sabbadini,P.S., Santos,C.S., Santos,L.S. Jr., Hirata,R., Mattos-Guaraldi,A.L., Efstratiou,A., Schmitt,M., "Direct Submission", Submitted (20-DEC-2011) CeBiTec, Bielefeld University, Universitaetsstr. 27, Bielefeld 33615, Germany.
-Trost,E., Blom,J., de Castro Soares,S., Huang,I.H., Al-Dilaimi,A., Schroder,J., Jaenicke,S., Dorella,F.A., Rocha,F.S., Miyoshi,A., Azevedo,V., Schneider,M.P., Silva,A., Camello,T.C., Sabbadini,P.S., Santos,C.S., Santos,L.S., Hirata,R. Jr., Mattos-Guaraldi, "Pangenomic Study of Corynebacterium diphtheriae That Provides Insights into the Genomic Diversity of Pathogenic Isolates from Cases of Classical Diphtheria, Endocarditis, and Pneumonia", J. Bacteriol. 194 (12), 3199-3215 (2012) PUBMED 22505676.
-Trost,E., Blom,J., de Castro Soares,S., Huang,I.H., Al-Dilaimi,A., Schroder,J., Jaenicke,S., Dorella,F.A., Rocha,F.S., Miyoshi,A., Azevedo,V., Schneider,M.P., Silva,A., Camello,T.C., Sabbadini,P.S., Santos,C.S., Santos,L.S., Hirata,R. Jr., Mattos-Guaraldi, "Direct Submission", Submitted (06-FEB-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
GTGACTACTCAATCCCTCGGACGCAAATTGGTGTGCAGCCTTGGCGCTACCGCTTTGATCTTGACCTCAACTGCTGCAGT
TACCCCCGCTTTTGCAGTAGACGTAGTTGCTTCTAAACCAGCTGAATACGGAAACATCGACGCCACTGCAAAAGGCAGCA
TCATTGTGCACAAGCACCAGAACCAGAATGCTGAGTACCCGCAGTATGCAGATCCAGAAACCGGATCATTCAACGGCGTA
CCAAGCGCAGGAGTCGATGGGGTTACATTCGACATCTACAAGCTCGATTATAATCTGACCACCCAACAAGGCTGGGATGA
GCTTGAAAAGTTGAAAATCGACAAAGATACCGTCAAAGGGAAAAAACCTACGGCAACTCAAGTCACTAAAAATGGCGGTA
AAGCAACTTTCGAAAACCTTGAGCTAGGCGCTTACCTTGTTGTGGAGCGCGACTCCTCAGGTGCTCAAGTTTCGGTTGAT
GGCGAAGACGTTTCTGTGATCGATCAAGCTGCGCCGTTCGTCGTGACTATCCCGTATCCCAATAACCATGAAGAACGACA
AGGCAAAAAACCGAACGGTAAATGGCTCTACAATGTCAACGTCTTTCCAAAGAACTCCGTTTCTCGTATGACTAAGGACG
TGGAAGATCAGGCAAAGCATGGTTTGTTATTGGGCTCTGAGGTGCGTTACCCAGTCACCGCACAAATTCCTACATTCCCA
ACTGGCGATAAACTCAAGTACTTCATCATCACTGACAAGATGAGCGAACACTTTGATGCTAATAGCTTGGGTGTGGACAC
CGTTCAGATCGGTGCGGATGGGTCAGTCCCTCTTACAGAAGAGACTGATTATAAAGTAACAAAGGTCGGAAACACCGTTC
ATGTTGCTCTGACAAAGGCTGGCCTGAAAAAAGCTGGCCAGCATCAAAAAGAGTATGTCCACGTAACCTTCAAAGGTAAA
TTGACCAGCGTTAGTTATGGCTCGATTGATAATGGTGCTGAGGCATACATCGCATTCACTCCTAATGATGACCTAAATGA
GCCTCCAACAGTTCCTCCAGTAGCTACTCCTGAAGACCCTGAAGGTGACGTAACACTTAAGCCTTTGAACTCGCCTCGCG
TAATCACCAAGTGGGGTCAAGTGACCATTTTGAAGAAGGACGCTGCTGATGGTCAGACCGGCCTCAAGGATGCCAAGTTC
AAGGTTTATGCGGCGAAAGATCCTTACCCAACTGACGGAAAGTGCGTTGCGGAGAAGGGCGAGGAAGTTAAAAAGGACGG
TCAAGAATACACTGTGACCACCGGTGAAGAAGGCAAAGCCGTCATTGATGGCCTCTTCGTTGCCGATTGGAAGAGCGGTC
AGCCGGTAAAGGATTTCCGCTGCTATGTGCTTGAAGAGACTGAGGCGCCTGCAGGCTTTATCAAGCCTAAGGGTGATAAG
GCTTTGACCCCGATTACTGTCTACCCAGGTACGTCGAAGGTGGACCATGAGTTCAAGATCGAAAACGTCAAGCGTGACGC
TCCGAACCTGCCGCTGACCGGTGGCCAGGGTGTCGCTGCGATGATGATCGCTGGTGGTTTGCTGTTGGCTGTGTCGATGG
GTGCGGCTGTTGTGTTCGTGCGTCGGATGCGTCGTCAGTAG
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| Protein sequence : | |
MTTQSLGRKLVCSLGATALILTSTAAVTPAFAVDVVASKPAEYGNIDATAKGSIIVHKHQNQNAEYPQYADPETGSFNGV
PSAGVDGVTFDIYKLDYNLTTQQGWDELEKLKIDKDTVKGKKPTATQVTKNGGKATFENLELGAYLVVERDSSGAQVSVD
GEDVSVIDQAAPFVVTIPYPNNHEERQGKKPNGKWLYNVNVFPKNSVSRMTKDVEDQAKHGLLLGSEVRYPVTAQIPTFP
TGDKLKYFIITDKMSEHFDANSLGVDTVQIGADGSVPLTEETDYKVTKVGNTVHVALTKAGLKKAGQHQKEYVHVTFKGK
LTSVSYGSIDNGAEAYIAFTPNDDLNEPPTVPPVATPEDPEGDVTLKPLNSPRVITKWGQVTILKKDAADGQTGLKDAKF
KVYAAKDPYPTDGKCVAEKGEEVKKDGQEYTVTTGEEGKAVIDGLFVADWKSGQPVKDFRCYVLEETEAPAGFIKPKGDK
ALTPITVYPGTSKVDHEFKIENVKRDAPNLPLTGGQGVAAMMIAGGLLLAVSMGAAVVFVRRMRRQ
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