Name : cpfrc_00995 (cpfrc_00995)
Accession : YP_003783396.1
PAI name : PiCp 4
PAI accession : NC_014329_P4
Strain : Corynebacterium pseudotuberculosis 1/06-A
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : Predicted outer membrane protein
Homologs in the searched genomes : 9 hits ( 8 protein-level, 1 DNA-level )
Publication :
-Trost,E., "Direct Submission", Submitted (08-JUL-2010) CeBiTec, Bielefeld University, Universitaestrasse 27, Bielefeld 33615, Germany.
-Trost,E., Ott,L., Schneider,J., Schroder,J., Jaenicke,S., Goesmann,A., Husemann,P., Stoye,J., Dorella,F.A., Rocha,F.S., de Castro Soares,S., D'Afonseca,V., Miyoshi,A., Ruiz,J., Silva,A., Azevedo,V., Burkovski,A., Guiso,N., Join-Lambert,O.F., Kayal,S. and , "The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence", BMC Genomics 11, 728 (2010) PUBMED 21192786 REMARK Publication Status: Online-Only.
-Trost,E., Ott,L., Schneider,J., Schroder,J., Jaenicke,S., Goesmann,A., Husemann,P., Stoye,J., Dorella,F.A., Rocha,F.S., de Castro Soares,S., D'Afonseca,V., Miyoshi,A., Ruiz,J., Silva,A., Azevedo,V., Burkovski,A., Guiso,N., Join-Lambert,O.F., Kayal,S. and , "Direct Submission", Submitted (16-JUL-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
TTGCTGACCGTCGTGACTCTTGTATTTTCTATTTTAAACATTGGAGTTATGGTTCCGACTACCAACGCACAGAATGCTGA
GTGTGCAGGTAGATGGGAAAACCTAAAGTGGGAAGAGGGGCAAGGCGTAAAAAACGGCAGTTATACGGACGCAAATCAGT
TCTCCGTTGCGACTTTTGATTGGTCAGTTCCTGATACGTCGAAAGCCGGTCAGACTTTTACGCTGCAGTTACCTAGTCAG
CTAAAACCTGCTTCAGGTGCACCTAATGCTTTTGAACTGAAAGATGCGAGCGGTGTGAAAGTTGCCGATGCCGTTTGGGA
GGGGAAGGTTCTTACAATAACTCTTGCTGACTATGCGGATTCACATTTTAATGTGATAGGTCAAGCTCGTATATCGCTCG
AATGGGATCGAGCCAACATCGATACAAACCGTGGATATGACAGCAAAACTGATGGATTATTGAATTTTTATGGTTGTGGT
AATGGCGGACTCGAAGGTGTCTATCCTAAAGATGGTCCCTCCGGTGATACACATGAAAATGGAAAAAGAGGCCAATATGC
GGGCGAATATGTGGTAGAAGGAATCCCTTATTACCTCAGTCGCTGGACGATATATGTTGATGGCAGGACCAAAGGAAACA
ACGGAATTAATGAATTCACGGTTACAGATACTGCTCCTGTTGGCCATAAATTTGTTTGTGATTCCAAATATTCCAGAAAC
TTCATACCTACTGAGGTAGGAACTTTCTATCAAGGTATTTACCATAGAGACAGCATTATCGATGCTTCTGAAAGGAAGCA
GGGTGGGAGTTATACAGGCATAACGGCGAGGGGAATACTTCACACGGGTTATGGATTTGAGCTGAGCTGCTCAGAAAATC
TTCTCACGGTCCGCTTTCCATATGGGGTATCACAAAATTCTGGTCCGCTCATTAACTTCTATACCTACACCACCGAGAGT
CCGCGGCCTTTCTCTTCTCAGAAGAATACGGCATATGTCGGCGATAAACCGATAGAAGGATTTACCTATATACCAGGTGC
AGAAGGGTCCGGTTCTGGCAATGTTGGCGGTTTTTCGATCAAGAAAGTTGTCATGGGTGGCGCTGGAACCCAGGTTCCAG
CGCCATTCAAATTCAAGTACAAGTGTGTACGTGACTCGAACATAATTGAGAAAACCGTTGATGTCTCTCCGAATGATGGT
TTTATTCACATCAAAAACATTGAGAAAGGCATGCGTTGTGAGGTAACAGAAGTTTCCTCGGAAAACACAATTCCTAAGTC
CCGTTTGACATGGGAAATAGATGGTACCCCCGCAGACAAAGCTAACTTTGAAGTGCGCTCTCCAGAGGAGAAATCCATCG
ACCTCATCGCAATTAACACCTATGATGCTGCTCCAGAAACTGGAACTTTCACTATCACCAAGAAGGTTTCCGGCTGGGAT
GAGGAAAAGGCGAAAACAAAGAGTTTACTTTTAACTATCAATGCGAAGTTGCTGGGCAGGATGAAATTAAGGGGAAAATC
CAGGTAA
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| Protein sequence : | |
MLTVVTLVFSILNIGVMVPTTNAQNAECAGRWENLKWEEGQGVKNGSYTDANQFSVATFDWSVPDTSKAGQTFTLQLPSQ
LKPASGAPNAFELKDASGVKVADAVWEGKVLTITLADYADSHFNVIGQARISLEWDRANIDTNRGYDSKTDGLLNFYGCG
NGGLEGVYPKDGPSGDTHENGKRGQYAGEYVVEGIPYYLSRWTIYVDGRTKGNNGINEFTVTDTAPVGHKFVCDSKYSRN
FIPTEVGTFYQGIYHRDSIIDASERKQGGSYTGITARGILHTGYGFELSCSENLLTVRFPYGVSQNSGPLINFYTYTTES
PRPFSSQKNTAYVGDKPIEGFTYIPGAEGSGSGNVGGFSIKKVVMGGAGTQVPAPFKFKYKCVRDSNIIEKTVDVSPNDG
FIHIKNIEKGMRCEVTEVSSENTIPKSRLTWEIDGTPADKANFEVRSPEEKSIDLIAINTYDAAPETGTFTITKKVSGWD
EEKAKTKSLLLTINAKLLGRMKLRGKSR
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