Name : cpfrc_00986 (cpfrc_00986)
Accession : YP_003783387.1
PAI name : PiCp 4
PAI accession : NC_014329_P4
Strain : Corynebacterium pseudotuberculosis 1/06-A
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : -
Homologs in the searched genomes : 27 hits ( 27 protein-level )
Publication :
-Trost,E., "Direct Submission", Submitted (08-JUL-2010) CeBiTec, Bielefeld University, Universitaestrasse 27, Bielefeld 33615, Germany.
-Trost,E., Ott,L., Schneider,J., Schroder,J., Jaenicke,S., Goesmann,A., Husemann,P., Stoye,J., Dorella,F.A., Rocha,F.S., de Castro Soares,S., D'Afonseca,V., Miyoshi,A., Ruiz,J., Silva,A., Azevedo,V., Burkovski,A., Guiso,N., Join-Lambert,O.F., Kayal,S. and , "The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence", BMC Genomics 11, 728 (2010) PUBMED 21192786 REMARK Publication Status: Online-Only.
-Trost,E., Ott,L., Schneider,J., Schroder,J., Jaenicke,S., Goesmann,A., Husemann,P., Stoye,J., Dorella,F.A., Rocha,F.S., de Castro Soares,S., D'Afonseca,V., Miyoshi,A., Ruiz,J., Silva,A., Azevedo,V., Burkovski,A., Guiso,N., Join-Lambert,O.F., Kayal,S. and , "Direct Submission", Submitted (16-JUL-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGTCACCGACCACGGGCGTAACCGCAGAACGCGTCAATGAAGACATAAAAGATGATGATAAGGCTAATGCGGAGTTCAA
CCGATCTTCGACAAAATTCTCCGCGAGGATGATACGCAATTATTTAGATAAAACACGGATTGCATGGATTCCTATCACGT
CAATACGACGGATACTTTTCCCTATATTTACTTCCGGGAAAAGCATTATTAAACGAGTCCCGATCTCGTTTTTGTTGCTT
GCTCTCTTATGGATTCTTTATGCAAGCATTGATCATCCGCGAGATGTGCTGGGATTGAACTCATCGGAGAAACTACCATC
GTGGCACCTTCTTACTGCAGGCTTTACGGTAGGTTCGCATCAATCCGCAGTATTGGCAACTCTCGGAATTCTATTTTTGG
CTGTTCCTGCTGAATTTGTGCTGGGATCGACTCGATTCTTAGTAGCAGTTGGGGTACTAAACGGAATTTCTATTCCACTA
GGGATCCTTAGCGCTCGCTTTATTGAGACTTTAGGTCTTAATCAGTGGGGTAATGACCTGCTTAATGAGACACTACTGAG
TCCGAGCGGCTGGATTTTTGGAACTGCTGCAGTCGCCTCTTCCGCAATGTCTACGTTGTGGCGGCGTCGACTCAGACTGG
TGCTCTTTTCTCTGTCCTTTACTCTAGTGCTGTTTTCTGGGACCTTGACAGATTCAGTAGCAACGGTGGCTACTATCATC
GGTACCATTATTGGGGCTGTTCAACTTGGGGGAAGAAAATACCAGAGAATAAAGATCATTTTCCGGCGTCCCTCGCTTAG
AGAATCTCGTATTTTGGTAGCAGTGCTCTGTATGAGTGTGGCTTTGGGACCTGTTGTTGTTGCCTTTAACCCTTACGCGC
ACGGTCCATTTTCTATGGTGACCAGCTTGATGTGGCAGCCGCATATTTCTTCAGCTGATGTGGCAGAGATTTGTGCACCA
GATTATTCCTCACCAGAATGCATCGATGCACTAACTCTGACTCGACAAACGGGTTTTGCAGCTATTTTTGCTAACTTAGT
CCCGGTTATTGCGCAGTTAATCTTCTGTATTGGCCTGATCCGTGGACGTCGAGTAGCTTGGGGCTTCTCTCTTGTGCTGC
AGTGCTTGTCGCTTTTTGCGATCGCAGTTCAGCTTATTGCGATTACTGATGAACGCGGCAATTCGCTAATTTTCACAGTC
AATTTCTTTGAAGTCATGTTGCCGTGGTTAGTTACACTATTGGCTCTTGGCGTTAGCCAACGACTGTTCTTTGTGAATGT
AGAGCGTAAAGAGGTTGTACGAAACCTGTCATTAATTTTGGCCACGTTTGTGATCACAGCGTTAACGTGGATAATAGGCG
TTTATTATCTGGCAGATAACTTTAGCTCGTTGGATTCTTTGCTTTATGCCTTTTATGAATTGCCTAGTAGATATCTTCCT
CCGGCTTTATCTTTAGTACTACAACACGTGCTGTATCCGGAGAGCCAACCTGCCTGGATACTTTATCAATGGGTAGGGGC
AGTGTTCTGGATGGTGGCATTGTTTGCCCTTTACAGACTCATCATGAGCATCCCTGCGACTGGACATAATGCGTCGGATA
TTGTCACAGCTCGCAAGATCCTACGTAATGGTTCTGGTGATCATCTGTCTTGGATGAGTATGTGGGACGGAAATAGTTTC
TGGTTTGCTGCGCCTAAGTTAGAGGAGAATGCTGCTGAGACTCCAGCTGAAGACGAGTCCCAAACTGAGCCGCTCCCGCG
TGGTTTTGTTGCGTTTAGATTGGTTAAAGGCATAGCGGTAACTCTCGGAGAACCTGTGGTTCTGGATCAGAAAGACAGGT
TGGCTGTAGCGCGAGAATTCAAAGCATATGCGTCTGGGTGCGGATGGCGAGTCGCATGGTATTCCACGCGTGAGGAGTTT
GCTGAGGAAATCCGTGTTGATGGCTTTAGAAAGCTGCATGTTGCAGAAGAATCTGTTTTGCATACCACCAACACCGAATT
TAAAGGGAAGAAGTTTCAAAACATCCGTACTGCGCGTAATCGAGCTGTTAAAGAAGGCATTAGCACAGTATGGACATCTT
GGGCAGAGGCCTCTCCTGATCTGCAAAATAGGATTGTTGTGCTTTCTGAGGAATGGGTTTCAGAAAGAGCATTGCCCGAA
ATGGGATTCACGCTTGGCACTCTGGAAGAGCTCAAAGACTCTGAGACCAAGTTACTGGTTGCAGTCGATGAAAATGGGCA
TGTACATGGTATAACAAGCTGGTTGCCTGTTCACGAAAACGGTGTTCTTGCCGGGTACACTTTGGACTTCATGCGTCGCG
ACACCAACGGCTTCCGGCCTGTCATTGAGTTTTTGCTGGCTGAAGCACTGATTAAGGCGAAAGAACTCGGGTGCTCGTGG
GTCTCACTTTCGGGAGCGCCGCTTGCCCCGCCATCGGGACAAACAATGCCTACGCTTCTCGACGCAACACTGAATAAGGC
AGGAGAAGCTATCGAACCTTTGTATGGGTTTAGATCTTTGGCGGCATCCAAATATAAGTTCCACCCTGAACATCGAGCCT
GGTATTTATGCTATGACGACGAGCTAGCTTTGCCGACAATCGGCCTAGCGGTTTCTCAATGTTATCTCCCTCAGCTAAGC
GCTAAAGACGCTCGTGCCGCGCTTATTACTTGGGTACGAGCACAGCGAATGCCATAA
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| Protein sequence : | |
MSPTTGVTAERVNEDIKDDDKANAEFNRSSTKFSARMIRNYLDKTRIAWIPITSIRRILFPIFTSGKSIIKRVPISFLLL
ALLWILYASIDHPRDVLGLNSSEKLPSWHLLTAGFTVGSHQSAVLATLGILFLAVPAEFVLGSTRFLVAVGVLNGISIPL
GILSARFIETLGLNQWGNDLLNETLLSPSGWIFGTAAVASSAMSTLWRRRLRLVLFSLSFTLVLFSGTLTDSVATVATII
GTIIGAVQLGGRKYQRIKIIFRRPSLRESRILVAVLCMSVALGPVVVAFNPYAHGPFSMVTSLMWQPHISSADVAEICAP
DYSSPECIDALTLTRQTGFAAIFANLVPVIAQLIFCIGLIRGRRVAWGFSLVLQCLSLFAIAVQLIAITDERGNSLIFTV
NFFEVMLPWLVTLLALGVSQRLFFVNVERKEVVRNLSLILATFVITALTWIIGVYYLADNFSSLDSLLYAFYELPSRYLP
PALSLVLQHVLYPESQPAWILYQWVGAVFWMVALFALYRLIMSIPATGHNASDIVTARKILRNGSGDHLSWMSMWDGNSF
WFAAPKLEENAAETPAEDESQTEPLPRGFVAFRLVKGIAVTLGEPVVLDQKDRLAVAREFKAYASGCGWRVAWYSTREEF
AEEIRVDGFRKLHVAEESVLHTTNTEFKGKKFQNIRTARNRAVKEGISTVWTSWAEASPDLQNRIVVLSEEWVSERALPE
MGFTLGTLEELKDSETKLLVAVDENGHVHGITSWLPVHENGVLAGYTLDFMRRDTNGFRPVIEFLLAEALIKAKELGCSW
VSLSGAPLAPPSGQTMPTLLDATLNKAGEAIEPLYGFRSLAASKYKFHPEHRAWYLCYDDELALPTIGLAVSQCYLPQLS
AKDARAALITWVRAQRMP
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