PAI Gene Information


Name : cpfrc_00028 (cpfrc_00028)
Accession : YP_003782428.1
PAI name : PiCp 1
PAI accession : NC_014329_P1
Strain : Corynebacterium pseudotuberculosis 1/06-A
Virulence or Resistance: Not determined
Product : hypothetical protein
Function : -
Note : -
Homologs in the searched genomes :   18 hits    ( 17 protein-level,   1 DNA-level )  
Publication :
    -Trost,E., "Direct Submission", Submitted (08-JUL-2010) CeBiTec, Bielefeld University, Universitaestrasse 27, Bielefeld 33615, Germany.

    -Trost,E., Ott,L., Schneider,J., Schroder,J., Jaenicke,S., Goesmann,A., Husemann,P., Stoye,J., Dorella,F.A., Rocha,F.S., de Castro Soares,S., D'Afonseca,V., Miyoshi,A., Ruiz,J., Silva,A., Azevedo,V., Burkovski,A., Guiso,N., Join-Lambert,O.F., Kayal,S. and , "The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights into gene-regulatory networks contributing to virulence", BMC Genomics 11, 728 (2010) PUBMED 21192786 REMARK Publication Status: Online-Only.

    -Trost,E., Ott,L., Schneider,J., Schroder,J., Jaenicke,S., Goesmann,A., Husemann,P., Stoye,J., Dorella,F.A., Rocha,F.S., de Castro Soares,S., D'Afonseca,V., Miyoshi,A., Ruiz,J., Silva,A., Azevedo,V., Burkovski,A., Guiso,N., Join-Lambert,O.F., Kayal,S. and , "Direct Submission", Submitted (16-JUL-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.


DNA sequence : 
TTGATTATGGCTTCACATCCATACCGGAATCACTGCAACGTCTGCGGCAATCTCCTAAAAAAGAACGGCAAAACGTCCAC
AGGAAAGACCCGGTACAGATGCAAGGGATGCGGAGCATCGTCGACAGCAACGCGATCAGGGACGCTGCATCAAAGACAGA
TGAAGGATTTTATAACGTGGCTTTTAGGCCCCACCTCGCGCTATAACAACGATATTTCGCGAGCTCAGCGTCGTTCAATG
TCCTGGTGCTGGCAGGTTCCCGTCCCACAGCCAGAGATGTTAGACAACGCGTACATATTGGTATTGGATAAAGGAGCTTC
TTTCCGCCCAGAGCACCTTCTCGTGGCATATAACAGCTCCCATGTACTGGGATGGAAATGGGTAGACAAAGACAATAAAA
TCGCATGTATGCAGGTGCATGACCATTTCCCGCAGCCAAGTGCCGCAGTTATTGACGGAAGTCAATCAACGGCTCAGACA
ATCCAATCCATATGGCCGGGGATACCAGTACGCCGATGCCTATCTCATATTAGAAAGAGCGTTGATCAAAAAACTTCACA
AACACCCCGAACTCAGCCTGCTATAGAGATAAAAGAGCTAACCGATTCCCTTAAGAATGTTTATACGTCCGAACAGGCTA
AGTTGTGGCTCGCTCGCTACGCCAGGTGGGAGGACAGATGGAAAGAACTGCTAAAACATCGCACCAATGTTTCTAAAGAT
AACTGCAGCATAGACGATTACGAATGGGAGTGGACGCATAAAGAGTTACGAACAATCCGCTTCATGTATAGAAAATTGAT
CAAAAAGGAAGAACTCTTCTTTCCTTTTTCCGGATCCGACATTGTTGCCCACAACGTATTTTTGTCTCGTCGCGATTCAC
AGTTGGGAGAGACCATCAGCACAGATATTACAAATCTTTTCAGTGCACACCGTGGTATCAACCACGATCATGGCTGCAGA
ATGGTGGAGTGGTATCTGAATAGTAAGACCGAGTCTCCTTTTATACCCGAGCGCATTATCAGCCATGATCACTGGAGATG
A

Protein sequence : 
MIMASHPYRNHCNVCGNLLKKNGKTSTGKTRYRCKGCGASSTATRSGTLHQRQMKDFITWLLGPTSRYNNDISRAQRRSM
SWCWQVPVPQPEMLDNAYILVLDKGASFRPEHLLVAYNSSHVLGWKWVDKDNKIACMQVHDHFPQPSAAVIDGSQSTAQT
IQSIWPGIPVRRCLSHIRKSVDQKTSQTPRTQPAIEIKELTDSLKNVYTSEQAKLWLARYARWEDRWKELLKHRTNVSKD
NCSIDDYEWEWTHKELRTIRFMYRKLIKKEELFFPFSGSDIVAHNVFLSRRDSQLGETISTDITNLFSAHRGINHDHGCR
MVEWYLNSKTESPFIPERIISHDHWR