Name : HPB8_739 (HPB8_739)
Accession : YP_003728760.1
PAI name : cag PAI
PAI accession : NC_014256_P1
Strain : Helicobacter pylori 2017
Virulence or Resistance: Not determined
Product : regulator of nonsense transcripts 1
Function : -
Note : Regulator of nonsense transcripts 1 (ATP-dependent helicase RENT1) (Nonsense mRNA reducing factor 1) (NORF1) (Up-frameshift suppressor 1 homolog) (hUpf1)
Homologs in the searched genomes : 1 hits ( 1 protein-level )
Publication :
-Blom,J., "Direct Submission", Submitted (30-NOV-2009) Blom J., Cebitec, Bielefeld University, Universitaetsstr. 25, 33615, GERMANY.
-Farnbacher,M., Jahns,T., Willrodt,D., Daniel,R., Haas,R., Goesmann,A., Kurtz,S. and Rieder,G., "Sequencing, annotation, and comparative genome analysis of the gerbil-adapted Helicobacter pylori strain B8", BMC Genomics 11, 335 (2010) PUBMED 20507619 REMARK Publication Status: Online-Only.
-Farnbacher,M., Jahns,T., Willrodt,D., Daniel,R., Haas,R., Goesmann,A., Kurtz,S. and Rieder,G., "Direct Submission", Submitted (18-JUN-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
TTGTGTAAAGGTTTGCTCTATAAACACATTTTAGAAGAGAGCGTTTTTGAAGTGTCGCCCATGTATGAGAATGCAATTGA
TTGGAAAATAACCAAGTGTTTGTTTCATGGGATACAACTTTTACTGCCCATTGCATACAAGGAATTTAAACATAAAAAGT
ACACACCAAGGGATACTCTCAAGGTGTGGGTAACAAATTATGACAGCTTGCTAAAAAGTGCATTCATTGCTGAAAAAGAG
CCAGAACCCAAACACATGGATGTGATTATGCTCTTTAATGACCGACTGGGATCTCAAATTTTAAAATATGCTTATATTTT
TAATGACTTCAATCTTAATTATTCCGTGTTAGATTATCAAAAGAATGGAGCAATCAAAAATACCAAGCAATTTTACGATC
CTGAGAATATTATCCGTTGGATTAATGTTGAAAGAGAGCATAAACTAGAAAAAACAAGTAGCTATAACAAAAATCAAGTT
CAAAAAATCATAGAGCTTTTAGAGCAAATCAATCGCATTCTTAATCAAAGAAAAATCAGAAAAACCATAGGAATTATCAC
ACCTTATAATGCCCAAAAAAGATGCTTGCGATCAGAAGTGGAAAAATACGGCTTCAAGAATTTTGATGAGCTCAAAATAG
ACACTGTGGATGCCTTTCAAGGCGAGAAGGCAGATATTATTATTTATTCCACCGTGAAAACTTATGGTAATCTTTCTTTC
TTGATAGATTCTAAACGCTTGAATGTAGCTATTTCTAGGGCAAAAGAAAATCTCATTTTTGTGGGCAAAAAGTCTTTCTT
TGAGAATTTGCGAAGCGATGAGAAGAATATCTTTAGCGCTATTTTGCAAGTCTGTAGATAG
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| Protein sequence : | |
MCKGLLYKHILEESVFEVSPMYENAIDWKITKCLFHGIQLLLPIAYKEFKHKKYTPRDTLKVWVTNYDSLLKSAFIAEKE
PEPKHMDVIMLFNDRLGSQILKYAYIFNDFNLNYSVLDYQKNGAIKNTKQFYDPENIIRWINVEREHKLEKTSSYNKNQV
QKIIELLEQINRILNQRKIRKTIGIITPYNAQKRCLRSEVEKYGFKNFDELKIDTVDAFQGEKADIIIYSTVKTYGNLSF
LIDSKRLNVAISRAKENLIFVGKKSFFENLRSDEKNIFSAILQVCR
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