Name : cagM (HPB8_706)
Accession : YP_003728727.1
PAI name : cag PAI
PAI accession : NC_014256_P1
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : cag pathogenicity island protein M
Function : -
Note : -
Homologs in the searched genomes : 45 hits ( 45 protein-level )
Publication :
-Blom,J., "Direct Submission", Submitted (30-NOV-2009) Blom J., Cebitec, Bielefeld University, Universitaetsstr. 25, 33615, GERMANY.
-Farnbacher,M., Jahns,T., Willrodt,D., Daniel,R., Haas,R., Goesmann,A., Kurtz,S. and Rieder,G., "Sequencing, annotation, and comparative genome analysis of the gerbil-adapted Helicobacter pylori strain B8", BMC Genomics 11, 335 (2010) PUBMED 20507619 REMARK Publication Status: Online-Only.
-Farnbacher,M., Jahns,T., Willrodt,D., Daniel,R., Haas,R., Goesmann,A., Kurtz,S. and Rieder,G., "Direct Submission", Submitted (18-JUN-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGCTTGCAAAAATCGTTTTTAGCTCATTGGTTGCGTTTGGAGTTTTGTCGGCTAATGTGGAGCAGTTTGGTTCATTTTT
CAACGAGATAAAAAAAGAACAAGAAGAAGTGGCTGCAAAAGAAGACGCTCTTAAGGCTCGCAAGAAGCTCTTAAACAATA
CGCATGATTTCTTAGAAGACTTGATTTTTAGAAAACAAAAAATCAAAGAGCTTATGGATCATAGAGCTAAAGTTCTTTCA
GACTTAGAAAACAAATACAAAAAAGAAAAAGAGGCTCTAGAGAAAGAGACAAGAGGTAAAATCCTTACTGCTAAGTCAAA
GGCTTATGGGGATTTGGAGCAAGCCTTAAAAGATAACCCTCTCTATAGGAAACTTCTTCCTAACCCTTATGCCTATGTTT
TAAACCAAGAAACATTCACCAAAGAAGATAGGGAGCGTTTGAGTTATTACTACCCCCAGGTGAAAACGAGCAGTATTTTT
AAAAAAACTACCGCTACCACTAAAGATAAGGCTCAGGCTTTGCTTCAAATGGGTGTGTTTTCTTTAGATGAAGAACAAAA
CAAAAAAGCGAGCCGATTAGCTCTATCTTACAAGCAAGCGATTGAAGAATATTCCAATAACATTTCTAATTTATTGAGCA
GAAAAGAATTGGATAATATAGATTATTACTTACAGCTTGAAAGAAACAAGTTTGACTCCAAAGCAAAAGATATTGCTCAA
AAGGCTACTAACACGCTTATTTTTAACTCGGAACGCTTGGCGTTTAGCATGGCGATTGATAAGATTAATGAGAAATACTT
AAGGGGCTATGAGGCTTTTTCTAACTTGTTGAAAAGTGTCAAAGATGATGTGGAATTGAATACTCTGACTAAAAATTTTA
CCAATCAAAAATTGAGTTTCGCTCAAAAACAAAAATTGTGTTTGTTGGTTTTAGACAGCTTCAATTTTGATACCCAATCC
AAAAAATCTATATTAAAAAAGACTAATGAATACAATATTTTCGTAGATAGCGATCCTATGATGAGCGACAAAACAACTAT
GCAAAAAGAACACTACAAGATATTTAATTTCTTCAAAACAGTGGTTTCTGCATACCGAAACAATGTTGCCAAGAATAATC
CCTTTGAATAG
|
| Protein sequence : | |
MLAKIVFSSLVAFGVLSANVEQFGSFFNEIKKEQEEVAAKEDALKARKKLLNNTHDFLEDLIFRKQKIKELMDHRAKVLS
DLENKYKKEKEALEKETRGKILTAKSKAYGDLEQALKDNPLYRKLLPNPYAYVLNQETFTKEDRERLSYYYPQVKTSSIF
KKTTATTKDKAQALLQMGVFSLDEEQNKKASRLALSYKQAIEEYSNNISNLLSRKELDNIDYYLQLERNKFDSKAKDIAQ
KATNTLIFNSERLAFSMAIDKINEKYLRGYEAFSNLLKSVKDDVELNTLTKNFTNQKLSFAQKQKLCLLVLDSFNFDTQS
KKSILKKTNEYNIFVDSDPMMSDKTTMQKEHYKIFNFFKTVVSAYRNNVAKNNPFE
|
|
