Name : virB10-1 (HPP12_0462)
Accession : YP_002301098.1
PAI name : cag PAI
PAI accession : NC_011498_P1
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : VirB10 type IV secretion protein
Function : -
Note : -
Homologs in the searched genomes : 28 hits ( 25 protein-level, 3 DNA-level )
Publication :
-Fischer,W., Windhager,L., Karnholz,A., Zeiller,M., Zimmer,R. and Haas,R., "Direct Submission", Submitted (22-OCT-2008) Max von Pettenkofer-Institut fuer Hygiene und Medizinische Mikrobiologie, Ludwig-Maximilians-Universitaet Muenchen, Pettenkoferstr. 9a, Munich 80336, Germany.
-Fischer,W., Windhager,L., Rohrer,S., Zeiller,M., Karnholz,A., Hoffmann,R., Zimmer,R. and Haas,R., "Strain-specific genes of Helicobacter pylori: genome evolution driven by a novel type IV secretion system and genomic island transfer", Nucleic Acids Res. 38 (18), 6089-6101 (2010) PUBMED 20478826.
-Fischer,W., Windhager,L., Rohrer,S., Zeiller,M., Karnholz,A., Hoffmann,R., Zimmer,R. and Haas,R., "Direct Submission", Submitted (30-OCT-2008) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGGGCTTTTTTAGAGTAATTAGAAACGCACCGATTGTAAGTGTCTTTATTGTTTTGATGCTTATTTTTTGTGCATGGTT
TTTCCTTTATGATGATAGCTCGCCTAAAGCAGTAAAAATATATGTTAAAGGTAAGTTTCCAATCTCTGACTATCTCTACA
AACAAGCGGATGAAAAGAAAATCCTACCACAGAACAATGTCGTTAAACAAGAAATTAAAGAAGAAAGAATTAAAAAATCT
TGTAAGGGTCAGATAACAGATAGTAAGGGTAATTTAATAGATGATGATTGCAATATTATAGCCACTCAAAAACAAGTTAA
TAATTTACCAAACTTACCAAAAGATATACTTAAAACCAAACCTACTGTTACCTCCAATCCTTCCAACTACAATACCGCTA
ACGAAGAAGAAAAAACCCGCCTGGTGATTTTAGCGTCTCGTATTAGCAGCCAAAAAGAAACGCAGCCTCCAACCTCTATA
AAAAATAGTGTTTCTCACACAAAATCCAAAGAAAAACAAGGACTTGAAAAAGAATACGGCTCTAGCGGTTTTAAAAATTT
TAAAAGAAAAAATATAGCGAGCAGTGAAAACAAACTTTTGAGAATGATTACAGCTGACAGGATGATCCCAGCCATTCTGA
TCACTCCTATTAGCAGTGAAATAGGGGGGAGTAAGGTAGTCGCTCAAGTGGAGAGTGATATATACGCAACGATGGGTAGA
GCGGTTTTAATCCCCAAAGGGAGTAGAGCCATAGGCTATTACAACTCTAATAACAAAATAGGAGAATACCGCTTAGAAAT
TGCTTGGAATAGGATAATCACGCCACAAGGGGTCAATATCATACTAAGCGATGCTAAAGGGGCTGATGTCAAGGGCTATA
ACGGCATGATAGGCACACTCCATAACAAATATTGGGAACGCTATGGTATTCCTTTATCCTTAAGCACCTTGTCAAATGGG
CTACTCATAGGTCTTACTAGCGGTCTTACCGAAGCGATGAAAAACAAAAAGGGTGGTTTTAATCAAAACTATTTTGGAGA
TTACATGATGATGCAAATGACGAGGCAAACTGGTATCAGCCTAAATAATATTATCGCTCAAATCATGCGAGAGCAAATCA
GGATTAAGCCCATTATCACTATTAGAGAAGGAAGCCATATTTTTATTAGTCCTAATACGGATATTTGGTTTCCTATCCCT
AAAAACAATGAAGTCTTAGCGAAATTTTTTAATGAAGAAAAGGAGCAAAACAATGATACAAAATAG
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| Protein sequence : | |
MGFFRVIRNAPIVSVFIVLMLIFCAWFFLYDDSSPKAVKIYVKGKFPISDYLYKQADEKKILPQNNVVKQEIKEERIKKS
CKGQITDSKGNLIDDDCNIIATQKQVNNLPNLPKDILKTKPTVTSNPSNYNTANEEEKTRLVILASRISSQKETQPPTSI
KNSVSHTKSKEKQGLEKEYGSSGFKNFKRKNIASSENKLLRMITADRMIPAILITPISSEIGGSKVVAQVESDIYATMGR
AVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNG
LLIGLTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIP
KNNEVLAKFFNEEKEQNNDTK
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