Name : pilR (YpsIP31758_3730)
Accession : YP_001402684.1
PAI name : YAPI
PAI accession : NC_009708_P1
Strain : Yersinia pseudotuberculosis IP 31758
Virulence or Resistance: Virulence
Product : type IV pilus biogenesis protein PilR
Function : -
Note : identified by match to protein family HMM PF00482
Homologs in the searched genomes : 25 hits ( 25 protein-level )
Publication :
-Eppinger,M., Rosovitz,M., Fricke,W.W., Rasko,D.A., Lindler,L.E., Carniel,E. and Ravel,J., "Direct Submission", Submitted (05-JUN-2007) Microbial Genomics and Pathogen Functional Genomic Resource Center, J. Craig Venter Institute, 9712 Medical Center Drive, Rockville, MD 20850, USA.
-Eppinger,M., Rosovitz,M.J., Fricke,W.F., Rasko,D.A., Kokorina,G., Fayolle,C., Lindler,L.E., Carniel,E. and Ravel,J., "The complete genome sequence of Yersinia pseudotuberculosis IP31758, the causative agent of Far East scarlet-like fever", PLoS Genet. 3 (8), E142 (2007) PUBMED 17784789.
-Eppinger,M., Rosovitz,M.J., Fricke,W.F., Rasko,D.A., Kokorina,G., Fayolle,C., Lindler,L.E., Carniel,E. and Ravel,J., "Direct Submission", Submitted (26-JUL-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGATTTTTCGTCCTGCCCGAAATATGTCTTTGGCGAAACGCCTACGGTATGAGTTGGTGCGCCATACTTTTAGTGCTCA
TTACCGCCTGGAGTTTTATGACGCATTGCATTTTTTACTGGGAAACGGCCACCCCTTAGGGGCTGCTTTGCGAATGATTG
CGGAGGTTCATACCGATTTTGGGAAGCTTTGGCATCCTTATGGCGATTTGGTGGATGACTGTCTGGAGTCGTTATCGGAT
AACAGTACGGGACGTATGCTTGAGGACGTGCTTGCCGCTTGGGGGCCATTGGAAGAGGCCGCTTTAATCAGCGCAGGTAT
GCGTAGTGGAAAATTGCCAGAAGCACTGCGACAAGCGGGCAAGTTGGTCGAAGCCCGCCGCCGTATTCTGACACTGGTTG
GCAAAATGTCCCTTTATCCACTGCTGTTGCTTAGTCTGGGCAGTGGCATGTTGGGCATCAATGGCATGTATTTGATCCCC
ACGCTGCGTAAGCTCTCTGATCCAGAAAACTGGCGCGGTGCATTAGGTTTTATGCATGCAGTGGCCAACGTTACGGACAA
GCAGAGTACCGTTGCGGTGGGGGTGATTGCCATCTTGGTTGGGCTGGTGCTGTGGTCTATTCCCCGTTGGCGTGGCCGGT
TACGCCGCTTTGCTGACAACATAATGCCCTGGTCGGTCTACAAAGATATTCAAGGGGCGGTGTTCCTGATGAATATGGCT
GCGCTGCTGAGAGCGAATGTGCAGACGTTAGAGGCGTTGCAGATCTTACTGCCGTTTTCTTCTCCCTGGCTGCAAGAACG
GCTTGACGCCATTATCGCCTGTATCGAACAGGGCGACCATCTGGGGAAGGCTTTGCGTAATAGCGGCTACGCATTCCCCA
GTAAAGAAGCGGCTAACTATCTCTCCTTGCTGACCGAAGGTGATGGCGCGCCAGATATTATAAGTCGTTACGGTGATCGC
TGGTTGGAACAAACGCTGGAGCGAGTCAACAAGCGGGTCATTGGCGTCATGTTTTTCTCTCTGTTACTGATTTTCAGTTT
CTTCTTACTCATCTTGTCTATGGTGATGCAAATTCAGGATATGACCAGTGACTCAATGTAA
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| Protein sequence : | |
MIFRPARNMSLAKRLRYELVRHTFSAHYRLEFYDALHFLLGNGHPLGAALRMIAEVHTDFGKLWHPYGDLVDDCLESLSD
NSTGRMLEDVLAAWGPLEEAALISAGMRSGKLPEALRQAGKLVEARRRILTLVGKMSLYPLLLLSLGSGMLGINGMYLIP
TLRKLSDPENWRGALGFMHAVANVTDKQSTVAVGVIAILVGLVLWSIPRWRGRLRRFADNIMPWSVYKDIQGAVFLMNMA
ALLRANVQTLEALQILLPFSSPWLQERLDAIIACIEQGDHLGKALRNSGYAFPSKEAANYLSLLTEGDGAPDIISRYGDR
WLEQTLERVNKRVIGVMFFSLLLIFSFFLLILSMVMQIQDMTSDSM
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