Name : set8nm (NWMN_0395)
Accession : YP_001331429.2
PAI name : vSa_alpha
PAI accession : NC_009641_P1
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Virulence
Product : superantigen-like protein
Function : -
Note : these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation
Homologs in the searched genomes : 200 hits ( 199 protein-level, 1 DNA-level )
Publication :
-Baba,T., Bae,T., Schneewind,O. and Hiramatsu,K., "Direct Submission", Submitted (15-FEB-2007) Tadashi Baba, Juntendo University School of Medicine, Department of Bacteriology; 2-1-1 Hongo, Bunkyo, Tokyo 113-8421, Japan (E-mail:tbaba@med.juntendo.ac.jp, Tel:81-3-5802-1041, Fax:81-3-5684-7830).
-Baba,T., Bae,T., Schneewind,O., Takeuchi,F. and Hiramatsu,K., "Genome sequence of Staphylococcus aureus strain Newman and comparative analysis of staphylococcal genomes: polymorphism and evolution of two major pathogenicity islands", J. Bacteriol. 190 (1), 300-310 (2008) PUBMED 17951380.
-Baba,T., Bae,T., Schneewind,O., Takeuchi,F. and Hiramatsu,K., "Direct Submission", Submitted (06-JUL-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGAAATTTACAGTGATAGCTAAAGCGATATTTATATTAGGAATATTAACAACAAGTGTAATGATAACAGAAAATCAATC
GGTTAATGCAAAAGGAAAGTATGAAAAAATGAACCGTTTATATGATACAAACAAGTTACATCAATACTATTCAGGACCTA
GTTATGAGTTAACAAATGTTAGTGGCCAAAGTCAAGGTTATTATGACTCTAACGTTTTGCTTTTTAACCAACAAAATCAA
AAGTTCCAAGTGTTTTTATTGGGAAAAGATGAAAATAAATACAAAGAAAAAACACATGGTTTAGATGTCTTTGCGGTACC
AGAATTAGTAGATTTAGATGGAAGAATATTTAGTGTTAGTGGTGTAACAAAGAAAAACGTAAAATCAATATTTGAGTCTC
TAAGAACGCCGAACTTACTAGTTAAAAAAATAGACGATAAAGACGGTTTTTCTATTGATGAATTTTTCTTTATTCAAAAG
GAAGAAGTGTCATTGAAGGAACTTGATTTTAAAATAAGAAAACTGTTGATTAAAAAATACAAACTGTATGAAGGGTCAGC
TGATAAAGGTAGAATTGTTATTAATATGAAAGATGAAAATAAGTATGAAATTGATTTAAGTGATAAATTAGATTTCGAGC
GTATGGCAGATGTCATTAATAGTGAACAAATTAAAAACATCGAAGTGAATTTGAAATAA
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| Protein sequence : | |
MKFTVIAKAIFILGILTTSVMITENQSVNAKGKYEKMNRLYDTNKLHQYYSGPSYELTNVSGQSQGYYDSNVLLFNQQNQ
KFQVFLLGKDENKYKEKTHGLDVFAVPELVDLDGRIFSVSGVTKKNVKSIFESLRTPNLLVKKIDDKDGFSIDEFFFIQK
EEVSLKELDFKIRKLLIKKYKLYEGSADKGRIVINMKDENKYEIDLSDKLDFERMADVINSEQIKNIEVNLK
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