Name : set5nm (NWMN_0392)
Accession : YP_001331426.1
PAI name : vSa_alpha
PAI accession : NC_009641_P1
Strain : Staphylococcus aureus 04-02981
Virulence or Resistance: Virulence
Product : superantigen-like protein 5
Function : -
Note : SSL5, SET3, SET10; bind P-selectin glycoprotein ligand-1 and inhibit P-selectin-mediated neutrophil rolling along the endothelium; these proteins share structural homology to known superantigens but do not exhibit any of the properties expected such as hi
Homologs in the searched genomes : 180 hits ( 180 protein-level )
Publication :
-Baba,T., Bae,T., Schneewind,O. and Hiramatsu,K., "Direct Submission", Submitted (15-FEB-2007) Tadashi Baba, Juntendo University School of Medicine, Department of Bacteriology; 2-1-1 Hongo, Bunkyo, Tokyo 113-8421, Japan (E-mail:tbaba@med.juntendo.ac.jp, Tel:81-3-5802-1041, Fax:81-3-5684-7830).
-Baba,T., Bae,T., Schneewind,O., Takeuchi,F. and Hiramatsu,K., "Genome sequence of Staphylococcus aureus strain Newman and comparative analysis of staphylococcal genomes: polymorphism and evolution of two major pathogenicity islands", J. Bacteriol. 190 (1), 300-310 (2008) PUBMED 17951380.
-Baba,T., Bae,T., Schneewind,O., Takeuchi,F. and Hiramatsu,K., "Direct Submission", Submitted (06-JUL-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
| DNA sequence : | |
ATGAAAATGACAGCAATTGCGAAAGCAAGTTTAGCATTAGGTATTTTAGCAACAGGAACAATAACGTCATTGCATCAAAC
TGTAAATGCGAGTGAACATAAAGCAAAATATGAAAATGTGACAAAAGATATCTTTGACTTAAGAGATTACTATAGTGGCG
CAAGTAAGGAACTTAAAAATGTTACTGGTTATCGTTATAGCAAAGGTGGCAAGCATTACCTTATCTTTGATAAAAATAGA
AAATTCACAAGAGTACAGATATTTGGTAAAGATATTGAAAGATTTAAAGCACGTAAAAATCCGGGATTAGACATATTTGT
TGTTAAAGAAGCGGAAAACCGTAATGGCACAGTGTTTTCATATGGTGGTGTCACTAAGAAAAATCAAGACGCTTATTATG
ATTATATAAACGCACCAAGATTTCAAATCAAGAGAGATGAAGGTGACGGTATTGCTACGTACGGTAGAGTACACTACATT
TATAAAGAAGAGATTTCACTTAAAGAACTCGACTTTAAATTGAGACAGTATTTAATTCAAAATTTTGATCTGTATAAAAA
GTTTCCTAAAGATAGTAAGATAAAAGTGATAATGAAAGATGGCGGCTATTATACGTTTGAACTTAATAAAAAATTACAAA
CAAATCGCATGAGTGACGTCATTGACGGTAGAAATATTGAAAAAATAGAAGCCAACATTAGATAA
|
| Protein sequence : | |
MKMTAIAKASLALGILATGTITSLHQTVNASEHKAKYENVTKDIFDLRDYYSGASKELKNVTGYRYSKGGKHYLIFDKNR
KFTRVQIFGKDIERFKARKNPGLDIFVVKEAENRNGTVFSYGGVTKKNQDAYYDYINAPRFQIKRDEGDGIATYGRVHYI
YKEEISLKELDFKLRQYLIQNFDLYKKFPKDSKIKVIMKDGGYYTFELNKKLQTNRMSDVIDGRNIEKIEANIR
|
|
