Name : aldA-1 (VC0395_A0344)
Accession : YP_001216300.1
PAI name : VPI-1
PAI accession : NC_009457_P1
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Not determined
Product : aldehyde dehydrogenase
Function : -
Note : identified by match to protein family HMM PF00171
Homologs in the searched genomes : 1713 hits ( 1713 protein-level )
Publication :
-Feng,L., Reeves,P.R., Lan,R., Ren,Y., Gao,C., Zhou,Z., Ren,Y., Cheng,J., Wang,W., Wang,J., Qian,W., Li,D. and Wang,L., "A recalibrated molecular clock and independent origins for the cholera pandemic clones", PLoS ONE 3 (12), E4053 (2008) PUBMED 19115014.
-Feng,L., Reeves,P.R., Lan,R., Ren,Y., Gao,C., Zhou,Z., Ren,Y., Cheng,J., Wang,W., Wang,J., Qian,W., Li,D. and Wang,L., "Direct Submission", Submitted (18-MAY-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Heidelberg,J., "Direct Submission", Submitted (16-MAR-2007) The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA.
| DNA sequence : | |
TTGAAATTTCAATACGATTTTGTTTTTTTAAATCAATTCTCATGTAAGAAGTTAATTTCATTCTATAGAATAATTTTTCC
ATCAAAAAAGGTAGCTGTTTTTTATATGATTTATCCAATTCCTAATAGCGAAACTTCGACTGTTCATTTCAAAGATGTAT
ATGATAATTACATTGGAGGTCAATGGATGAAGCCACACAGTGGCGAATATTTTAGCAATACGTCACCAGTAAATGGACTG
GTGTTTTGTCGTGTTGCTCGCTCGTCTTCGCAAGATGTCGAACTTGCTCTAGATGCCGCCCATAATGCACTTGAATCATG
GTCTACAACAAGTGCAGTAGAAAGATCAAATATTCTTCTGAGGATTGCTGATCGAATCGAATCAAATTTAGAAACTCTCG
CAATAGTTGAATCATGGGATAATGGAAAACCTATCCGTGAAACTTTAGCAGCTGACCTACCGTTGACTATTGATCACTTT
CGATATTTTGCGGCTTGTATTCGATCACAAGAAGGTGCTGCTTCCGAACTTGACTCTAGAACGTTAACTTATCATTTACC
GGAACCAATAGGTGTTGTAGGCCAAATAATACCATGGAATTTTCCGTTACTCATGGCTGCTTGGAAATTAGCTCCCGCTC
TTGCAGCAGGTTGTACTGTTGTTCTCAAACCTGCAGAACAAACCCCCGTTTCAATTTTGTTTTTAATGGAAATTATTGGT
GATTTAATTCCAGCTGGTGTTATTAATGTTGTTAATGGTTTCGGCTCTGAAGCAGGTAATGCATTAGCAACAAGCCAACG
TATCGATAAACTAGCATTTACAGGTTCTACTGAAATTGGTAACCATATTCTTAAATGTGCGGCGGATAACTTGATTCCAT
CCACAATCGAATTAGGTGGAAAATCTCCAAACATTTATTTCCCCGATATCTTTTCTCATGAAGACCAATATCTTGATAAA
TGTATTGAGGGTGCACTTTTAGCATTTTTCAACCAAGGTGAGGTTTGTACCTGTCCATCTAGAATTTTAGTTCATGAATC
TATTTATGAAAAATTCATTGCCAAAATTATTGAACGAGTAGCATTAATTAAACAAGGAAATCCTTTAGATACCGAAACAC
AAATTGGTGCTCAAGTATCTAAAGAACAGTACGATAAGATTCTTGGTTATATACAAATAGGTAAAGATGAAGGGGCAGAG
CTAATTTTTGGTGGGCATCCTAACAATCAAGAAAATTATTTATCTGGTGGTTATTATATTAAACCAACCCTATTCTTTGG
TCATAATCAGATGCATATCTTTCAAGAGGAAATATTTGGACCTGTAATTGCAATCACTAAGTTTAAAGATGAAATTGAAG
CACTGCACCTTGCTAATGATACTGTTTATGGTTTAGGTGCCGGTGTGTGGACACGTGATATAAATATTGCTCATCGTATG
GCAAAAAACATTAAAGCTGGAAGAGTATGGGTAAATTGTTATCATGCATATCCTGCTCATGCGGCTTTTGGTGGATATAA
AAAATCTGGCATTGGACGAGAAACACACAAATTAACATTGAGTCATTACCAAAATATAAAAAACGTTCTTATTAGTCATG
AGATTCATCCTCTAGGTCTATTTTAA
|
| Protein sequence : | |
MKFQYDFVFLNQFSCKKLISFYRIIFPSKKVAVFYMIYPIPNSETSTVHFKDVYDNYIGGQWMKPHSGEYFSNTSPVNGL
VFCRVARSSSQDVELALDAAHNALESWSTTSAVERSNILLRIADRIESNLETLAIVESWDNGKPIRETLAADLPLTIDHF
RYFAACIRSQEGAASELDSRTLTYHLPEPIGVVGQIIPWNFPLLMAAWKLAPALAAGCTVVLKPAEQTPVSILFLMEIIG
DLIPAGVINVVNGFGSEAGNALATSQRIDKLAFTGSTEIGNHILKCAADNLIPSTIELGGKSPNIYFPDIFSHEDQYLDK
CIEGALLAFFNQGEVCTCPSRILVHESIYEKFIAKIIERVALIKQGNPLDTETQIGAQVSKEQYDKILGYIQIGKDEGAE
LIFGGHPNNQENYLSGGYYIKPTLFFGHNQMHIFQEEIFGPVIAITKFKDEIEALHLANDTVYGLGAGVWTRDINIAHRM
AKNIKAGRVWVNCYHAYPAHAAFGGYKKSGIGRETHKLTLSHYQNIKNVLISHEIHPLGLF
|
|
