Name : SSU05_0968 (SSU05_0968)
Accession : YP_001198334.1
PAI name : 89K
PAI accession : NC_009442_P1
Strain : Streptococcus suis 05ZYH33
Virulence or Resistance: Not determined
Product : Tn5252, Orf28
Function : -
Note : -
Homologs in the searched genomes : 27 hits ( 27 protein-level )
Publication :
-Chen,C., Tang,J., Dong,W., Wang,C., Feng,Y., Wang,J., Zheng,F., Pan,X., Liu,D., Li,M., Song,Y., Zhu,X., Sun,H., Feng,T., Guo,Z., Ju,A., Ge,J., Dong,Y., Sun,W., Jiang,Y., Wang,J., Yan,J., Yang,H., Wang,X., Gao,G.F., Yang,R., Wang,J. and Yu,J. CONSRTM BGI, "A glimpse of streptococcal toxic shock syndrome from comparative genomics of S. suis 2 Chinese isolates", PLoS ONE 2 (3), E315 (2007) PUBMED 17375201 REMARK Publication Status: Online-Only.
-Chen,C., Tang,J., Dong,W., Wang,C., Feng,Y., Wang,J., Zheng,F., Pan,X., Liu,D., Li,M., Song,Y., Zhu,X., Sun,H., Feng,T., Guo,Z., Ju,A., Ge,J., Dong,Y., Sun,W., Jiang,Y., Wang,J., Yan,J., Yang,H., Wang,X., Gao,G.F., Yang,R., Wang,J. and Yu,J. CONSRTM BGI, "Direct Submission", Submitted (08-MAY-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Chen,C., Tang,J., Dong,W., Wang,J., Wang,C., Pan,X., Zheng,F., Song,Y., Dong,Y., Zhu,X., Sun,H., Feng,T., Guo,Z., Ju,A., Ge,J., Wang,J., Wang,X., Gao,G.F., Yang,H., Yang,R., Wang,J. and Yu,J., "Direct Submission", Submitted (27-JUN-2006) Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 101300, China.
| DNA sequence : | |
ATGAAAGAGGATAAAAAGCTAGTCAAACAGGCTAGGCAAAACTTTCGAAGCAACTTAAAATCAGCTCGTATGCATTATCG
TAAAGAAGTTAGGACCTCAAAACAGACTGTTCCTAAAAAAGGAAGATTTCGAAAATCAGCCAAAAATTCTCTGTTTCAGG
AAAAGAAAACAGAGTTAAAAGGAAATCTACTCAGTAGCCAAAAGGAAGCAGAAGAGAAGTTCATAAAGGAAATTACCTAT
GTTTCTCCTAGACTGTTGAAGGTAAAGGAAATCAAGAACTATCGACTTCCGCAAGCTCAAGAACGTTTGCGGACAGCAAG
AAAACATCTGTCAGAAGTGAAACTAAGTGAGAAACAACAGGTAGTTAATCGCAAGTTTACTTTCCAAAAAGAAAATCCTT
CCCTGGAGTCTCGCTTTCAGTTTCACCAAGAAAAATCATTTGATCGACTAATTGCAGAAAAAGACGTAAGTTCTGCCAAG
CGTGAGGTTAAACAACTCAAGAAAGTCCAAAAGACTAAGAAAAACTCTACCAAATTCAAAGTTGGATTAGGCTTAGCTGC
ATCCGAATCGCTTGACCTGGTAGCACAGGAGGATGATTTAGATGGTCTAAGAACCATGAAGGATACTAGTTTGAAAGCCA
GACGCTATGGAATGTTTACCTTTCAAGCAGGTAAGGTGGCAGTAAAAAGTGGACAGACTGGTGTGCGGTTTACCAAAACA
AAATTTTCTCATGGAAAGGAACGATTCCAAAACTTCAAAAAGGGAAAAAGATTCACACGCCAGAAACCTCTTAAACCAAG
AAGACGTTACCAAACCTTTTTAAAGCATGTCAGAAAACAAAGTGTCGCAGGTTTCAAAGGAATCGTCCAAGCCATTAAGG
GAAGTATGACTTTCTTTTCTGTCATTGCGGGAAATCCTTTGACTTGGATTGTCTCAGGCATTCTCTTGATACTCCTTTTG
ATGATGAGCTTTTTCATGAGTGTTTCAGGTAGTAGTGTCATTCAACAAGATGAGATGGAGTTGTCCAAGGCCTATACCTA
CATGACGTGGGAAGATGCGGAGCATACGAGAACCAATGAAAAAGGGATTGCCTACTACACCAAAATTGATGAGGTCATGG
TTTACATGAATCATCAATACCAAGACTACAAGCTTGACGATTTCATGGAAACAGGTGGTGCGACTTATAAAGCATTTCTC
AGTCAAGTCTGGACGGACTTAAACGGTGGTGACTCTATTAAATCCATGTCTGACTTGTATAAAGAACCTGCTTACAAGCT
GTCTGATGAGGACCAAGAAGAGCTAAAGGAATTGACCGAAGAAGGCAATTATTTTGCCCTTCAAGAATTGGACAATCCCT
TTCAGGGACAGTCTGATGAAGATAGTTTAAGTATGTTATACCGATATGGTTATGAGGTCATGGATGAGAAACCAACGCTT
CATCACCATATTATCTTAGAAGCAAAAGAAGGCCAAGTTATTGTGGCTCCGATGGATGGCAAGGTATCTCTTGATGGAGA
GAACGTTGTTTTGACATCTGGTAAGGGAGTGAATAAAACTAAACTAACCTTGTTTGGCATTCATTCAGGCCGAGTGAGTG
AACATCAAAAAGTCTTGGCAGGAGACATTATTGGTCAGACCAAGGATGGAACGGGTCTAAAACTCACCTATCAAAAGGTT
GATGATGACACAGATAAGTTGGTCTATGTCAATCCAGCTTTCTACTTTCCAAAAGTAATCCAGGTTCAGACCACCATTGT
TCCAACTATCGGTCAATTTGGTGGCGACGAGTTCGAGAGAGCCAAGGCGATTTATGACTATCTCAAAAGCAAAGGTGCGA
CCAATCAAGCTATTGCAGCCATTTTAGGAAATTGGTCGGTAGAATCCTCTATTAATCCCAAGCGTGCAGAGGGCGACTAT
CTATCTCCCCCTATTGGTGCGACAGACAGTTCGTGGGATGATGAGGGCTGGCTCTCACTCAATGGTCCAATTATATACAA
TGGACGCTACCCCAATATTCTCAAACGTGGTTTAGGCTTAGGACAATGGACAGATACTGCAGATGGTTCACGCAGACATA
CCTTGTTGCTCGAATATGCCAAAGGAAAAAATCTAAAGTGGTATGACTTAGGGTTACAACTGGATTTCATGTTGCATGGG
GATAGTCCTTATTACACCAACTGGTTAAAGGACTTCTTCAAAAATTCAGGAAGTCCAGCTAGTCTTGCCCAACTCTTTCT
CATTTACTGGGAAGGAAATTCAGGGGATAAGCTACTTGAGCGTCAGACACGAGCAAGTGAGTGGTATTACCAAATTGAAA
AAGGCTTTAGTCAACCCAACGGTGGGACTGCACAAAGCGATCCAAAAGCACTTGAAGCTGTACGAGGAGATTTTTTTGAA
AACTCTATTCCAGGAGGTGGTGACGGTATGGGGTATGCCTACGGCCAATGTACTTGGGGCGTCGCAGCCCGTATCAACCA
ACTGGGTCTAAAACTCAAAGGTAAGAATGGTGAGAAGATTCCAATTATCAGTACCATGGGCAATGGCCAAGATTGGGTAC
GAACAGCCGCAAGTCTCGGTGGGGAGACAGGGACAAGTCCACAAGCAGGAGCTATACTCTCATTTGCGGGAGGAGGACAT
GGCACACCAGCAGAATACGGACATGTGGCTTTTGTCGAAAAAGTCTACCCAGATGGCTCATTCCTTATCTCCGAAACCAA
TTACAATGGCAATCCCAACTACACCTTCCGAAAATTATCTGGGGTGGATAGTAGCTTGAGTTTTGCTTATACGACGAAAT
AA
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| Protein sequence : | |
MKEDKKLVKQARQNFRSNLKSARMHYRKEVRTSKQTVPKKGRFRKSAKNSLFQEKKTELKGNLLSSQKEAEEKFIKEITY
VSPRLLKVKEIKNYRLPQAQERLRTARKHLSEVKLSEKQQVVNRKFTFQKENPSLESRFQFHQEKSFDRLIAEKDVSSAK
REVKQLKKVQKTKKNSTKFKVGLGLAASESLDLVAQEDDLDGLRTMKDTSLKARRYGMFTFQAGKVAVKSGQTGVRFTKT
KFSHGKERFQNFKKGKRFTRQKPLKPRRRYQTFLKHVRKQSVAGFKGIVQAIKGSMTFFSVIAGNPLTWIVSGILLILLL
MMSFFMSVSGSSVIQQDEMELSKAYTYMTWEDAEHTRTNEKGIAYYTKIDEVMVYMNHQYQDYKLDDFMETGGATYKAFL
SQVWTDLNGGDSIKSMSDLYKEPAYKLSDEDQEELKELTEEGNYFALQELDNPFQGQSDEDSLSMLYRYGYEVMDEKPTL
HHHIILEAKEGQVIVAPMDGKVSLDGENVVLTSGKGVNKTKLTLFGIHSGRVSEHQKVLAGDIIGQTKDGTGLKLTYQKV
DDDTDKLVYVNPAFYFPKVIQVQTTIVPTIGQFGGDEFERAKAIYDYLKSKGATNQAIAAILGNWSVESSINPKRAEGDY
LSPPIGATDSSWDDEGWLSLNGPIIYNGRYPNILKRGLGLGQWTDTADGSRRHTLLLEYAKGKNLKWYDLGLQLDFMLHG
DSPYYTNWLKDFFKNSGSPASLAQLFLIYWEGNSGDKLLERQTRASEWYYQIEKGFSQPNGGTAQSDPKALEAVRGDFFE
NSIPGGGDGMGYAYGQCTWGVAARINQLGLKLKGKNGEKIPIISTMGNGQDWVRTAASLGGETGTSPQAGAILSFAGGGH
GTPAEYGHVAFVEKVYPDGSFLISETNYNGNPNYTFRKLSGVDSSLSFAYTTK
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