Name : irp6 (YE2615)
Accession : YP_001006813.1
PAI name : HPI
PAI accession : NC_008800_P1
Strain : Yersinia enterocolitica 8081
Virulence or Resistance: Not determined
Product : lipoprotein inner membrane ABC-transporter
Function : -
Note : -
Homologs in the searched genomes : 75 hits ( 75 protein-level )
Publication :
-Delihas,N., "Annotation and evolutionary relationships of a small regulatory RNA gene micF and its target ompF in Yersinia species", BMC Microbiol. 3, 13 (2003) PUBMED 12834539 REMARK Publication Status: Online-Only.
-Delihas,N., "Direct Submission", Submitted (19-JAN-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA.
-Thomson,N.R., "Direct Submission", Submitted (30-JUN-2006) Thomson N.R., Pathogen Sequencing Unit, The Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge, CB10 1SA, UNITED KINGDOM.
-Thomson,N.R., Howard,S., Wren,B.W., Holden,M.T., Crossman,L., Challis,G.L., Churcher,C., Mungall,K., Brooks,K., Chillingworth,T., Feltwell,T., Abdellah,Z., Hauser,H., Jagels,K., Maddison,M., Moule,S., Sanders,M., Whitehead,S., Quail,M.A., Dougan,G., Parkh, "The complete genome sequence and comparative genome analysis of the high pathogenicity Yersinia enterocolitica strain 8081", PLoS Genet. 2 (12), E206 (2006) PUBMED 17173484.
| DNA sequence : | |
ATGTCATCTCAATCATCCAATACTGAATCGATGTCCCGATTTCCTCTCTGGCAGGTGATTAAACCGGTTCGCAGGAAGGT
TATTTTAGCTATGGCGCTGGCGGGGCTGGCGGCATTAACCAGCCTGGGGGCGCTCCTTTTTCTGGCGTGGAGCCTGCGCG
ACATTCGCGCGACGCCTGACACTATTCCGGTCTGGCCGCTGGGCGGCGTGATCGGCTGCGTGGTCTTAACTTTTGTTCTG
CGCTTGCAGGCGTTCAATACCTCTCATTACGCGGCTTTTCATCTGGAGAACATTCTACGCAGTAGGTTAGCCCGTAAAGC
ATTGCAGCTTCCGCCTGGCGTGTTACAGCAAATGGGTAGCGGGTCAGTGGCGAAAGTGATGCTGGATGACGTGAAGTCGT
TACATATCTTTGTGGCTGACAGCACGCCACTCTATGCCCGCGCGATCATCATGCCGCTGGCGACAATCGTTATCTTGTTC
TGGCTGGACTGGCGGCTGGCAATCGCGACGTTGGGGGTACTGGCGTTTGGATCGGTTGTTCTCGTGCTCGCCCGCCAGCG
CTCGGAAGATATGGCTCAGCGTTATCATAAGGCGCGCGAGCAGGTCAGTGCGGCGGTTATTGAGTTCGTGCAGGCCATGC
CCGTGGTGAGAACGTTTGATAGCGGCAGTACCAGTTTTTTGCGTTATCAACGCGCCCTTGAAGAGTGGGTCGATGTGCTC
AAAACCTGGTATCGCAAAGCCGGTTTTTCAGCGCGTTTTTCCTTCTCGATTCTGAATCCTCTCCCGACCCTGTTTGTCCT
GATCTGGTCGGGATACGGCCTGTTGCACTATGGCAGTCTCGATTTTATCGCGTGGGTGGCCGTTTTACTGCTGGGCAGCG
GAATGGCCGAAGCCGTAATGCCAATGATGATGCTCAATAACCTGGTCGCGCAAACGCGTTTAAGCATTCAGCGTATTTAT
CAGGTTCTCGCGATGCCGGAGTTATCGCTGCCGCAGTCTGACCAGCAGCCGCAAGAGGCGAGCATTACCTTTGAGCAGGT
GAGCTTTCATTATCCGCAAGCGCGTACTGGCGCCGCGTTGCAGGAGGTGAGCTTTCATGTGCCTGCCGGGCAAATTGTGG
CGCTGGTCGGGCCAAGCGGCGCCGGAAAAAGCACCGTAGCGCGCTTGTTGCTGCGTTACGCCGACCCGGACAAAGGCCAT
ATCCGTATTGGCGGCGTGGATCTGCGCGATATGCAGACGGACACCCTGATGAAGCAACTCTCATTTGTGTTTCAGGACAA
CTTCCTTTTTGCCGACATGATAGCCAATAACATTCGTCTGGGCGCGCCGGATACGCCGCTGGAGGCGGTAATAGCGGCGG
CCAGAGTGGCGCAGGCCCATGATTTTATTAGCGCGCTGCCAGAAGGTTACAACACGCGAGTCGGGGAACGTGGGGTATTT
CTCTCCGGCGGCCAGCGGCAGCGCATCACTATCGCCAGGGCGATTTTGCAGGATCGTCCCATCCTGGTGCTCGATGAGGC
GACGGCGTTTGCTGACCCGGAAAACGAAGCGGCGCTTATCAAGGCGCTCGCGGCGGCCATGCGCGGCCGGACGGTCATCA
TGGTCGCGCATCGTCTCTCAATGGTGACTCAGGCCGATGTGATATTGCTGTTTTCCGACGGACAGCTCAGGGAAATGGGG
AACCATACGCAACTGTTGGCGCAGGGTGGCCTGTATCAACGGCTCTGGCAACACTATCAGCAGGCGCAGCATTGGGTGCC
GGGTGGAACACAGGAAGAGGTGGTGGAAAATGAAAGACAATAA
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| Protein sequence : | |
MSSQSSNTESMSRFPLWQVIKPVRRKVILAMALAGLAALTSLGALLFLAWSLRDIRATPDTIPVWPLGGVIGCVVLTFVL
RLQAFNTSHYAAFHLENILRSRLARKALQLPPGVLQQMGSGSVAKVMLDDVKSLHIFVADSTPLYARAIIMPLATIVILF
WLDWRLAIATLGVLAFGSVVLVLARQRSEDMAQRYHKAREQVSAAVIEFVQAMPVVRTFDSGSTSFLRYQRALEEWVDVL
KTWYRKAGFSARFSFSILNPLPTLFVLIWSGYGLLHYGSLDFIAWVAVLLLGSGMAEAVMPMMMLNNLVAQTRLSIQRIY
QVLAMPELSLPQSDQQPQEASITFEQVSFHYPQARTGAALQEVSFHVPAGQIVALVGPSGAGKSTVARLLLRYADPDKGH
IRIGGVDLRDMQTDTLMKQLSFVFQDNFLFADMIANNIRLGAPDTPLEAVIAAARVAQAHDFISALPEGYNTRVGERGVF
LSGGQRQRITIARAILQDRPILVLDEATAFADPENEAALIKALAAAMRGRTVIMVAHRLSMVTQADVILLFSDGQLREMG
NHTQLLAQGGLYQRLWQHYQQAQHWVPGGTQEEVVENERQ
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